RNA–Protein interactions for RNA: ENST00000440400.1

ACTN4-204, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 3,180 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-204ENST00000440400 CRIPTQ9P021 101 aa7.23□□□□□ -1.25
ACTN4-204ENST00000440400 A8MUU9 505 aa7.22□□□□□ -1.25
ACTN4-204ENST00000440400 IGKV2-30P06310 120 aa7.21□□□□□ -1.26
ACTN4-204ENST00000440400 MT1HL1P0DM35 61 aa7.2□□□□□ -1.26
ACTN4-204ENST00000440400 LRP1Q07954 4544 aaKnown RBP7.19□□□□□ -1.26
ACTN4-204ENST00000440400 KRTAP25-1Q3LHN0 102 aa7.17□□□□□ -1.26
ACTN4-204ENST00000440400 MYCBP2O75592 4640 aa7.14□□□□□ -1.27
ACTN4-204ENST00000440400 P0C880 135 aa7.12□□□□□ -1.27
ACTN4-204ENST00000440400 IGKV2D-30A0A075B6S6 120 aa7.11□□□□□ -1.27
ACTN4-204ENST00000440400 C9orf92A6NGG3 77 aa7.05□□□□□ -1.28
ACTN4-204ENST00000440400 H0YAA0 97 aa7.04□□□□□ -1.28
ACTN4-204ENST00000440400 KRTAP4-5Q9BYR2 181 aa7□□□□□ -1.29
ACTN4-204ENST00000440400 NDUFAF8A1L188 74 aa6.99□□□□□ -1.29
ACTN4-204ENST00000440400 SEC61BP60468 96 aaKnown RBP6.98□□□□□ -1.29
ACTN4-204ENST00000440400 RPL37P61927 97 aaKnown RBP6.98□□□□□ -1.29
ACTN4-204ENST00000440400 LUZP6Q538Z0 58 aa6.97□□□□□ -1.29
ACTN4-204ENST00000440400 XP32Q5T750 250 aa6.97□□□□□ -1.29
ACTN4-204ENST00000440400 LCE2DQ5TA82 110 aaPredicted RBP6.97□□□□□ -1.29
ACTN4-204ENST00000440400 HERC2O95714 4834 aa6.95□□□□□ -1.3
ACTN4-204ENST00000440400 TPRXLQ17RH7 258 aa6.94□□□□□ -1.3
ACTN4-204ENST00000440400 BIRC6Q9NR09 4857 aa6.94□□□□□ -1.3
ACTN4-204ENST00000440400 J3QL48 77 aa6.93□□□□□ -1.3
ACTN4-204ENST00000440400 SPINT4Q6UDR6 99 aa6.92□□□□□ -1.3
ACTN4-204ENST00000440400 A0A1B0GU33 70 aa6.89□□□□□ -1.31
ACTN4-204ENST00000440400 K7ERS5 55 aa6.87□□□□□ -1.31
ACTN4-204ENST00000440400 KRTAP3-1Q9BYR8 98 aa6.87□□□□□ -1.31
ACTN4-204ENST00000440400 ABCA13Q86UQ4 5058 aa6.86□□□□□ -1.31
ACTN4-204ENST00000440400 KRTAP3-3Q9BYR6 98 aa6.83□□□□□ -1.32
ACTN4-204ENST00000440400 KRTAP3-2Q9BYR7 98 aa6.83□□□□□ -1.32
ACTN4-204ENST00000440400 H1FX-AS1Q4G0G2 97 aa6.8□□□□□ -1.32
ACTN4-204ENST00000440400 COX6B2Q6YFQ2 88 aa6.8□□□□□ -1.32
ACTN4-204ENST00000440400 MUC17Q685J3 4493 aa6.79□□□□□ -1.32
ACTN4-204ENST00000440400 C10orf95Q9H7T3 257 aa6.77□□□□□ -1.33
ACTN4-204ENST00000440400 LPAP08519 4548 aa6.7□□□□□ -1.34
ACTN4-204ENST00000440400 HERC1Q15751 4861 aa6.69□□□□□ -1.34
ACTN4-204ENST00000440400 A0A0D9SG42 100 aa6.69□□□□□ -1.34
ACTN4-204ENST00000440400 PCLOQ9Y6V0 5065 aa6.67□□□□□ -1.34
ACTN4-204ENST00000440400 LRP2P98164 4655 aa6.66□□□□□ -1.34
ACTN4-204ENST00000440400 KRTAP15-1Q3LI76 137 aa6.66□□□□□ -1.34
ACTN4-204ENST00000440400 MUC2Q02817 5179 aa6.61□□□□□ -1.35
ACTN4-204ENST00000440400 KRTAP13-4Q3LI77 160 aa6.54□□□□□ -1.36
ACTN4-204ENST00000440400 S4R3F8 94 aa6.54□□□□□ -1.36
ACTN4-204ENST00000440400 KRTAP4-1Q9BYQ7 146 aa6.53□□□□□ -1.36
ACTN4-204ENST00000440400 KRTAP19-2Q3LHN2 52 aa6.52□□□□□ -1.37
ACTN4-204ENST00000440400 RNF213Q63HN8 5207 aa6.48□□□□□ -1.37
ACTN4-204ENST00000440400 HMCN2Q8NDA2 5059 aa6.47□□□□□ -1.37
ACTN4-204ENST00000440400 KRTAP10-6P60371 365 aaPredicted RBP6.44□□□□□ -1.38
ACTN4-204ENST00000440400 UBR4Q5T4S7 5183 aa6.4□□□□□ -1.39
ACTN4-204ENST00000440400 KRTAP12-2P59991 146 aa6.36□□□□□ -1.39
ACTN4-204ENST00000440400 FLGP20930 4061 aaPredicted RBP6.3□□□□□ -1.4
ACTN4-204ENST00000440400 FAT4Q6V0I7 4981 aa6.29□□□□□ -1.4
ACTN4-204ENST00000440400 CAMK2N1Q7Z7J9 78 aa6.29□□□□□ -1.4
ACTN4-204ENST00000440400 LCE2CQ5TA81 110 aa6.23□□□□□ -1.41
ACTN4-204ENST00000440400 KRTAP12-1P59990 96 aa6.21□□□□□ -1.42
ACTN4-204ENST00000440400 M0QZ58 72 aa6.17□□□□□ -1.42
ACTN4-204ENST00000440400 PLAC4Q8WY50 150 aa6.14□□□□□ -1.43
ACTN4-204ENST00000440400 LCE2BO14633 110 aa6.13□□□□□ -1.43
ACTN4-204ENST00000440400 LORP23490 312 aaPredicted RBP6.04□□□□□ -1.44
ACTN4-204ENST00000440400 MT1HP80294 61 aa6.03□□□□□ -1.44
ACTN4-204ENST00000440400 R4GN34 69 aa5.96□□□□□ -1.46
ACTN4-204ENST00000440400 SPRR2GQ9BYE4 73 aa5.87□□□□□ -1.47
ACTN4-204ENST00000440400 KRTAP9-8Q9BYQ0 159 aa5.87□□□□□ -1.47
ACTN4-204ENST00000440400 PRO2289Q9P1D8 64 aa5.87□□□□□ -1.47
ACTN4-204ENST00000440400 FSIP2Q5CZC0 6907 aa5.84□□□□□ -1.47
ACTN4-204ENST00000440400 MT2AP02795 61 aa5.83□□□□□ -1.48
ACTN4-204ENST00000440400 M0R2T5 61 aa5.82□□□□□ -1.48
ACTN4-204ENST00000440400 KRTAP19-1Q8IUB9 90 aa5.81□□□□□ -1.48
ACTN4-204ENST00000440400 MT1FP04733 61 aa5.79□□□□□ -1.48
ACTN4-204ENST00000440400 LOC100996750A0A140TA64 210 aa5.74□□□□□ -1.49
ACTN4-204ENST00000440400 KRTAP4-6Q9BYQ5 205 aa5.74□□□□□ -1.49
ACTN4-204ENST00000440400 LCE2AQ5TA79 106 aaPredicted RBP5.71□□□□□ -1.49
ACTN4-204ENST00000440400 KRTAP19-8Q3LI54 63 aa5.71□□□□□ -1.5
ACTN4-204ENST00000440400 KRTAP10-10P60014 251 aa5.66□□□□□ -1.5
ACTN4-204ENST00000440400 KRTAP9-3Q9BYQ3 159 aa5.66□□□□□ -1.5
ACTN4-204ENST00000440400 USH2AO75445 5202 aa5.66□□□□□ -1.5
ACTN4-204ENST00000440400 KRTAP23-1A1A580 65 aa5.63□□□□□ -1.51
ACTN4-204ENST00000440400 PP632Q6XCG6 107 aa5.61□□□□□ -1.51
ACTN4-204ENST00000440400 MT1BP07438 61 aa5.57□□□□□ -1.52
ACTN4-204ENST00000440400 INE1O15225 51 aa5.49□□□□□ -1.53
ACTN4-204ENST00000440400 SPRR5A0A1B0GTR4 108 aa5.45□□□□□ -1.54
ACTN4-204ENST00000440400 KRTAP10-5P60370 271 aa5.44□□□□□ -1.54
ACTN4-204ENST00000440400 MT1XP80297 61 aa5.43□□□□□ -1.54
ACTN4-204ENST00000440400 TNP1P09430 55 aa5.41□□□□□ -1.54
ACTN4-204ENST00000440400 KMT2DO14686 5537 aa5.25□□□□□ -1.57
ACTN4-204ENST00000440400 KRTAP10-12P60413 245 aa5.19□□□□□ -1.58
ACTN4-204ENST00000440400 LCE3AQ5TA76 89 aa5.19□□□□□ -1.58
ACTN4-204ENST00000440400 KRTAP8-1Q8IUC2 63 aa5.18□□□□□ -1.58
ACTN4-204ENST00000440400 KRTAP10-7P60409 375 aaPredicted RBP5.17□□□□□ -1.58
ACTN4-204ENST00000440400 KRTAP19-6Q3LI70 58 aa5.11□□□□□ -1.59
ACTN4-204ENST00000440400 SSPOA2VEC9 5147 aa5.08□□□□□ -1.6
ACTN4-204ENST00000440400 KRTAP12-3P60328 96 aa4.97□□□□□ -1.61
ACTN4-204ENST00000440400 KRTAP19-5Q3LI72 72 aa4.89□□□□□ -1.63
ACTN4-204ENST00000440400 KRTAP4-8A0A0G2JLE6 195 aa4.87□□□□□ -1.63
ACTN4-204ENST00000440400 KRTAP4-8Q9BYQ9 185 aa4.87□□□□□ -1.63
ACTN4-204ENST00000440400 KRTAP19-7Q3SYF9 63 aa4.85□□□□□ -1.63
ACTN4-204ENST00000440400 SYNE2Q8WXH0 6885 aaKnown RBP4.82□□□□□ -1.64
ACTN4-204ENST00000440400 KRTAP19-4Q3LI73 84 aa4.8□□□□□ -1.64
ACTN4-204ENST00000440400 FCGBPQ9Y6R7 5405 aaPredicted RBP4.79□□□□□ -1.64
ACTN4-204ENST00000440400 MUC12Q9UKN1 5478 aa4.77□□□□□ -1.65
ACTN4-204ENST00000440400 DSTQ03001 7570 aaKnown RBP4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms