RNA–Protein interactions for RNA: ENST00000439806.6

CPNE1-218, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-218ENST00000439806 A0A1B0GU33 70 aa5.35□□□□□ -1.55
CPNE1-218ENST00000439806 H1FX-AS1Q4G0G2 97 aa5.35□□□□□ -1.55
CPNE1-218ENST00000439806 S4R3F8 94 aa5.35□□□□□ -1.55
CPNE1-218ENST00000439806 DMBT1Q9UGM3 2413 aaPredicted RBP5.34□□□□□ -1.56
CPNE1-218ENST00000439806 KRTAP4-5Q9BYR2 181 aa5.3□□□□□ -1.56
CPNE1-218ENST00000439806 H0YAA0 97 aa5.29□□□□□ -1.56
CPNE1-218ENST00000439806 LRP1Q07954 4544 aaKnown RBP5.29□□□□□ -1.56
CPNE1-218ENST00000439806 KRTAP3-3Q9BYR6 98 aa5.28□□□□□ -1.56
CPNE1-218ENST00000439806 KRTAP3-2Q9BYR7 98 aa5.27□□□□□ -1.57
CPNE1-218ENST00000439806 J3QL48 77 aa5.26□□□□□ -1.57
CPNE1-218ENST00000439806 RYR3Q15413 4870 aa5.26□□□□□ -1.57
CPNE1-218ENST00000439806 LINC01554Q52M75 96 aa5.25□□□□□ -1.57
CPNE1-218ENST00000439806 KIAA1109Q2LD37 5005 aa5.23□□□□□ -1.57
CPNE1-218ENST00000439806 SEC61BP60468 96 aaKnown RBP5.22□□□□□ -1.57
CPNE1-218ENST00000439806 K7ERS5 55 aa5.21□□□□□ -1.58
CPNE1-218ENST00000439806 KRTAP10-6P60371 365 aaPredicted RBP5.2□□□□□ -1.58
CPNE1-218ENST00000439806 PRAC1Q96KF2 57 aa5.18□□□□□ -1.58
CPNE1-218ENST00000439806 CSAG1Q6PB30 78 aa5.17□□□□□ -1.58
CPNE1-218ENST00000439806 ADM2Q7Z4H4 148 aa5.16□□□□□ -1.58
CPNE1-218ENST00000439806 P0C880 135 aa5.13□□□□□ -1.59
CPNE1-218ENST00000439806 A0A0D9SG42 100 aa5.11□□□□□ -1.59
CPNE1-218ENST00000439806 KRTAP13-4Q3LI77 160 aa5.11□□□□□ -1.59
CPNE1-218ENST00000439806 EPPK1P58107 5090 aaKnown RBP5.09□□□□□ -1.59
CPNE1-218ENST00000439806 MYCBP2O75592 4640 aa5.08□□□□□ -1.6
CPNE1-218ENST00000439806 M0QZ58 72 aa5.03□□□□□ -1.6
CPNE1-218ENST00000439806 KRTAP4-1Q9BYQ7 146 aa5.03□□□□□ -1.6
CPNE1-218ENST00000439806 KRTAP25-1Q3LHN0 102 aa5.02□□□□□ -1.61
CPNE1-218ENST00000439806 ROMO1P60602 79 aa5□□□□□ -1.61
CPNE1-218ENST00000439806 SPINT4Q6UDR6 99 aa4.98□□□□□ -1.61
CPNE1-218ENST00000439806 LRP2P98164 4655 aa4.95□□□□□ -1.62
CPNE1-218ENST00000439806 KRTAP12-1P59990 96 aa4.95□□□□□ -1.62
CPNE1-218ENST00000439806 KRTAP12-2P59991 146 aa4.94□□□□□ -1.62
CPNE1-218ENST00000439806 LPAP08519 4548 aa4.94□□□□□ -1.62
CPNE1-218ENST00000439806 R4GN34 69 aa4.93□□□□□ -1.62
CPNE1-218ENST00000439806 H3BS24 57 aa4.9□□□□□ -1.63
CPNE1-218ENST00000439806 KRTAP19-2Q3LHN2 52 aa4.9□□□□□ -1.63
CPNE1-218ENST00000439806 CRIPTQ9P021 101 aa4.9□□□□□ -1.63
CPNE1-218ENST00000439806 BIRC6Q9NR09 4857 aa4.9□□□□□ -1.63
CPNE1-218ENST00000439806 ABCA13Q86UQ4 5058 aa4.88□□□□□ -1.63
CPNE1-218ENST00000439806 HERC2O95714 4834 aa4.88□□□□□ -1.63
CPNE1-218ENST00000439806 MUC17Q685J3 4493 aa4.87□□□□□ -1.63
CPNE1-218ENST00000439806 LORP23490 312 aaPredicted RBP4.83□□□□□ -1.64
CPNE1-218ENST00000439806 C10orf95Q9H7T3 257 aa4.76□□□□□ -1.65
CPNE1-218ENST00000439806 LCE2CQ5TA81 110 aa4.68□□□□□ -1.66
CPNE1-218ENST00000439806 CAMK2N1Q7Z7J9 78 aa4.68□□□□□ -1.66
CPNE1-218ENST00000439806 HERC1Q15751 4861 aa4.67□□□□□ -1.66
CPNE1-218ENST00000439806 M0R2T5 61 aa4.66□□□□□ -1.66
CPNE1-218ENST00000439806 KRTAP15-1Q3LI76 137 aa4.61□□□□□ -1.67
CPNE1-218ENST00000439806 MT1HP80294 61 aa4.6□□□□□ -1.67
CPNE1-218ENST00000439806 LCE2BO14633 110 aa4.59□□□□□ -1.67
CPNE1-218ENST00000439806 FLGP20930 4061 aaPredicted RBP4.58□□□□□ -1.68
CPNE1-218ENST00000439806 PCLOQ9Y6V0 5065 aa4.57□□□□□ -1.68
CPNE1-218ENST00000439806 HMCN2Q8NDA2 5059 aa4.55□□□□□ -1.68
CPNE1-218ENST00000439806 PLAC4Q8WY50 150 aa4.54□□□□□ -1.68
CPNE1-218ENST00000439806 SPRR2GQ9BYE4 73 aa4.54□□□□□ -1.68
CPNE1-218ENST00000439806 KRTAP10-10P60014 251 aa4.51□□□□□ -1.69
CPNE1-218ENST00000439806 PP632Q6XCG6 107 aa4.51□□□□□ -1.69
CPNE1-218ENST00000439806 MT2AP02795 61 aa4.5□□□□□ -1.69
CPNE1-218ENST00000439806 TNP1P09430 55 aa4.49□□□□□ -1.69
CPNE1-218ENST00000439806 KRTAP19-1Q8IUB9 90 aa4.49□□□□□ -1.69
CPNE1-218ENST00000439806 MT1FP04733 61 aa4.48□□□□□ -1.69
CPNE1-218ENST00000439806 KRTAP9-8Q9BYQ0 159 aa4.45□□□□□ -1.7
CPNE1-218ENST00000439806 NDUFAF8A1L188 74 aa4.44□□□□□ -1.7
CPNE1-218ENST00000439806 KRTAP23-1A1A580 65 aa4.39□□□□□ -1.71
CPNE1-218ENST00000439806 RNF213Q63HN8 5207 aa4.38□□□□□ -1.71
CPNE1-218ENST00000439806 KRTAP19-8Q3LI54 63 aa4.38□□□□□ -1.71
CPNE1-218ENST00000439806 MUC2Q02817 5179 aa4.34□□□□□ -1.71
CPNE1-218ENST00000439806 MT1BP07438 61 aa4.31□□□□□ -1.72
CPNE1-218ENST00000439806 LCE2AQ5TA79 106 aaPredicted RBP4.3□□□□□ -1.72
CPNE1-218ENST00000439806 KRTAP9-3Q9BYQ3 159 aa4.28□□□□□ -1.72
CPNE1-218ENST00000439806 FAT4Q6V0I7 4981 aa4.25□□□□□ -1.73
CPNE1-218ENST00000439806 MT1XP80297 61 aa4.23□□□□□ -1.73
CPNE1-218ENST00000439806 LCE3AQ5TA76 89 aa4.23□□□□□ -1.73
CPNE1-218ENST00000439806 KRTAP10-5P60370 271 aa4.22□□□□□ -1.73
CPNE1-218ENST00000439806 LUZP6Q538Z0 58 aa4.22□□□□□ -1.73
CPNE1-218ENST00000439806 UBR4Q5T4S7 5183 aa4.22□□□□□ -1.73
CPNE1-218ENST00000439806 PRO2289Q9P1D8 64 aa4.18□□□□□ -1.74
CPNE1-218ENST00000439806 A0A0A0MQY5 61 aa4.17□□□□□ -1.74
CPNE1-218ENST00000439806 KRTAP10-12P60413 245 aa4.15□□□□□ -1.75
CPNE1-218ENST00000439806 KRTAP8-1Q8IUC2 63 aa4.12□□□□□ -1.75
CPNE1-218ENST00000439806 SPRR5A0A1B0GTR4 108 aa4.11□□□□□ -1.75
CPNE1-218ENST00000439806 KRTAP10-7P60409 375 aaPredicted RBP4.09□□□□□ -1.75
CPNE1-218ENST00000439806 KRTAP12-3P60328 96 aa4.04□□□□□ -1.76
CPNE1-218ENST00000439806 KRTAP19-5Q3LI72 72 aa3.92□□□□□ -1.78
CPNE1-218ENST00000439806 LOC100996750A0A140TA64 210 aa3.86□□□□□ -1.79
CPNE1-218ENST00000439806 KRTAP4-6Q9BYQ5 205 aa3.86□□□□□ -1.79
CPNE1-218ENST00000439806 KRTAP4-8A0A0G2JLE6 195 aa3.84□□□□□ -1.79
CPNE1-218ENST00000439806 INE1O15225 51 aa3.84□□□□□ -1.79
CPNE1-218ENST00000439806 KRTAP4-8Q9BYQ9 185 aa3.84□□□□□ -1.79
CPNE1-218ENST00000439806 KRTAP19-6Q3LI70 58 aa3.79□□□□□ -1.8
CPNE1-218ENST00000439806 LCE3CQ5T5A8 94 aa3.79□□□□□ -1.8
CPNE1-218ENST00000439806 KRTAP19-7Q3SYF9 63 aa3.75□□□□□ -1.81
CPNE1-218ENST00000439806 USH2AO75445 5202 aa3.74□□□□□ -1.81
CPNE1-218ENST00000439806 KRTAP19-4Q3LI73 84 aa3.71□□□□□ -1.82
CPNE1-218ENST00000439806 MT1EP04732 61 aa3.69□□□□□ -1.82
CPNE1-218ENST00000439806 MT1LQ93083 61 aa3.67□□□□□ -1.82
CPNE1-218ENST00000439806 SSPOA2VEC9 5147 aa3.64□□□□□ -1.83
CPNE1-218ENST00000439806 KRTAP4-7Q9BYR0 210 aa3.6□□□□□ -1.83
CPNE1-218ENST00000439806 KRTAP9-6A8MVA2 160 aa3.56□□□□□ -1.84
CPNE1-218ENST00000439806 KMT2DO14686 5537 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms