RNA–Protein interactions for RNA: ENST00000438518.5

HDAC6-208, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-208ENST00000438518 CSAG1Q6PB30 78 aa8.84□□□□□ -0.99
HDAC6-208ENST00000438518 H7BZZ5 65 aa8.83□□□□□ -1
HDAC6-208ENST00000438518 CCDC179H3BU77 68 aa8.8□□□□□ -1
HDAC6-208ENST00000438518 KRTAP3-3Q9BYR6 98 aa8.79□□□□□ -1
HDAC6-208ENST00000438518 CYSTM1Q9H1C7 97 aa8.77□□□□□ -1.01
HDAC6-208ENST00000438518 KRTAP9-8Q9BYQ0 159 aa8.76□□□□□ -1.01
HDAC6-208ENST00000438518 CHKB-CPT1BH3BT56 60 aa8.69□□□□□ -1.02
HDAC6-208ENST00000438518 SPTSSBQ8NFR3 76 aa8.69□□□□□ -1.02
HDAC6-208ENST00000438518 MT2AP02795 61 aa8.68□□□□□ -1.02
HDAC6-208ENST00000438518 ATP5EP56381 51 aaPredicted RBP8.67□□□□□ -1.02
HDAC6-208ENST00000438518 KRTAP9-2Q9BYQ4 174 aa8.65□□□□□ -1.02
HDAC6-208ENST00000438518 H0YAA0 97 aa8.64□□□□□ -1.03
HDAC6-208ENST00000438518 TMEM258P61165 79 aa8.62□□□□□ -1.03
HDAC6-208ENST00000438518 KRTAP10-10P60014 251 aa8.61□□□□□ -1.03
HDAC6-208ENST00000438518 MT1FP04733 61 aa8.6□□□□□ -1.03
HDAC6-208ENST00000438518 COA5Q86WW8 74 aa8.6□□□□□ -1.03
HDAC6-208ENST00000438518 LCE2DQ5TA82 110 aaPredicted RBP8.56□□□□□ -1.04
HDAC6-208ENST00000438518 KRTAP9-6A0A140TA67 174 aa8.53□□□□□ -1.04
HDAC6-208ENST00000438518 PCP4P48539 62 aa8.5□□□□□ -1.05
HDAC6-208ENST00000438518 ADM2Q7Z4H4 148 aa8.46□□□□□ -1.06
HDAC6-208ENST00000438518 KRTAP9-3Q9BYQ3 159 aa8.46□□□□□ -1.06
HDAC6-208ENST00000438518 CRIPTQ9P021 101 aa8.46□□□□□ -1.06
HDAC6-208ENST00000438518 KRTAP3-2Q9BYR7 98 aa8.34□□□□□ -1.07
HDAC6-208ENST00000438518 SPRR2GQ9BYE4 73 aa8.33□□□□□ -1.08
HDAC6-208ENST00000438518 SEC61GP60059 68 aa8.32□□□□□ -1.08
HDAC6-208ENST00000438518 SERP1Q9Y6X1 66 aa8.32□□□□□ -1.08
HDAC6-208ENST00000438518 P0C880 135 aa8.31□□□□□ -1.08
HDAC6-208ENST00000438518 KRTAP19-1Q8IUB9 90 aa8.29□□□□□ -1.08
HDAC6-208ENST00000438518 LCE2BO14633 110 aa8.27□□□□□ -1.09
HDAC6-208ENST00000438518 R4GN34 69 aa8.26□□□□□ -1.09
HDAC6-208ENST00000438518 A0A1B0GU69 56 aa8.19□□□□□ -1.1
HDAC6-208ENST00000438518 M0QZ58 72 aa8.19□□□□□ -1.1
HDAC6-208ENST00000438518 FSIP2Q5CZC0 6907 aa8.19□□□□□ -1.1
HDAC6-208ENST00000438518 KRTAP19-8Q3LI54 63 aa8.17□□□□□ -1.1
HDAC6-208ENST00000438518 USH2AO75445 5202 aa8.16□□□□□ -1.1
HDAC6-208ENST00000438518 Q5VV11 94 aa8.14□□□□□ -1.11
HDAC6-208ENST00000438518 PRR15LQ9BU68 103 aa8.14□□□□□ -1.11
HDAC6-208ENST00000438518 LINC01558Q9Y6Z2 57 aa8.14□□□□□ -1.11
HDAC6-208ENST00000438518 RPS28P62857 69 aaKnown RBP8.1□□□□□ -1.11
HDAC6-208ENST00000438518 CRCT1Q9UGL9 99 aa8.08□□□□□ -1.12
HDAC6-208ENST00000438518 V9GYY9 64 aa8.08□□□□□ -1.12
HDAC6-208ENST00000438518 A0A1B0GU33 70 aa8.07□□□□□ -1.12
HDAC6-208ENST00000438518 MT1BP07438 61 aa8.05□□□□□ -1.12
HDAC6-208ENST00000438518 SMIM26A0A096LP01 95 aa8.04□□□□□ -1.12
HDAC6-208ENST00000438518 Q1T7F1 81 aa8□□□□□ -1.13
HDAC6-208ENST00000438518 LINC01554Q52M75 96 aa7.99□□□□□ -1.13
HDAC6-208ENST00000438518 SSPOA2VEC9 5147 aa7.98□□□□□ -1.13
HDAC6-208ENST00000438518 A6NN06 94 aa7.97□□□□□ -1.13
HDAC6-208ENST00000438518 KRTAP19-6Q3LI70 58 aa7.97□□□□□ -1.13
HDAC6-208ENST00000438518 KRTAP13-4Q3LI77 160 aa7.97□□□□□ -1.13
HDAC6-208ENST00000438518 PLAC4Q8WY50 150 aa7.96□□□□□ -1.14
HDAC6-208ENST00000438518 SPATA8Q6RVD6 105 aa7.89□□□□□ -1.15
HDAC6-208ENST00000438518 UQCR11O14957 56 aa7.87□□□□□ -1.15
HDAC6-208ENST00000438518 PSPHP1O15172 72 aa7.81□□□□□ -1.16
HDAC6-208ENST00000438518 A0A0D9SG42 100 aa7.79□□□□□ -1.16
HDAC6-208ENST00000438518 KRTAP10-5P60370 271 aa7.79□□□□□ -1.16
HDAC6-208ENST00000438518 PRO2289Q9P1D8 64 aa7.79□□□□□ -1.16
HDAC6-208ENST00000438518 FCGBPQ9Y6R7 5405 aaPredicted RBP7.71□□□□□ -1.18
HDAC6-208ENST00000438518 A8MU10 97 aa7.7□□□□□ -1.18
HDAC6-208ENST00000438518 MIR22HGQ0VDD5 57 aa7.7□□□□□ -1.18
HDAC6-208ENST00000438518 KRTAP12-1P59990 96 aa7.69□□□□□ -1.18
HDAC6-208ENST00000438518 MT1XP80297 61 aa7.68□□□□□ -1.18
HDAC6-208ENST00000438518 SPINT4Q6UDR6 99 aa7.68□□□□□ -1.18
HDAC6-208ENST00000438518 CAMK2N1Q7Z7J9 78 aa7.67□□□□□ -1.18
HDAC6-208ENST00000438518 A6NED7 52 aa7.63□□□□□ -1.19
HDAC6-208ENST00000438518 KRTAP9-7A8MTY7 169 aa7.62□□□□□ -1.19
HDAC6-208ENST00000438518 KRTAP12-2P59991 146 aa7.62□□□□□ -1.19
HDAC6-208ENST00000438518 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.55□□□□□ -1.2
HDAC6-208ENST00000438518 K7ERS5 55 aa7.52□□□□□ -1.21
HDAC6-208ENST00000438518 CDC42SE1Q9NRR8 79 aa7.45□□□□□ -1.22
HDAC6-208ENST00000438518 MACF1Q9UPN3 7388 aaKnown RBP7.35□□□□□ -1.23
HDAC6-208ENST00000438518 KRTAP10-12P60413 245 aa7.34□□□□□ -1.23
HDAC6-208ENST00000438518 KRTAP10-7P60409 375 aaPredicted RBP7.32□□□□□ -1.24
HDAC6-208ENST00000438518 C10orf95Q9H7T3 257 aa7.28□□□□□ -1.24
HDAC6-208ENST00000438518 SYNE2Q8WXH0 6885 aaKnown RBP7.26□□□□□ -1.25
HDAC6-208ENST00000438518 TNP1P09430 55 aa7.24□□□□□ -1.25
HDAC6-208ENST00000438518 KRTAP6-3Q3LI67 103 aa7.21□□□□□ -1.26
HDAC6-208ENST00000438518 KRTAP8-1Q8IUC2 63 aa7.17□□□□□ -1.26
HDAC6-208ENST00000438518 KMT2DO14686 5537 aa7.16□□□□□ -1.26
HDAC6-208ENST00000438518 BRK1Q8WUW1 75 aa7.16□□□□□ -1.26
HDAC6-208ENST00000438518 KRTAP4-8A0A0G2JLE6 195 aa7.13□□□□□ -1.27
HDAC6-208ENST00000438518 KRTAP4-8Q9BYQ9 185 aa7.13□□□□□ -1.27
HDAC6-208ENST00000438518 KRTAP5-9P26371 169 aa7.12□□□□□ -1.27
HDAC6-208ENST00000438518 KRTAP25-1Q3LHN0 102 aa7.12□□□□□ -1.27
HDAC6-208ENST00000438518 ROMO1P60602 79 aa7.06□□□□□ -1.28
HDAC6-208ENST00000438518 SPRR2FQ96RM1 72 aa6.99□□□□□ -1.29
HDAC6-208ENST00000438518 LCE3AQ5TA76 89 aa6.94□□□□□ -1.3
HDAC6-208ENST00000438518 KRTAP23-1A1A580 65 aa6.93□□□□□ -1.3
HDAC6-208ENST00000438518 MUC12Q9UKN1 5478 aa6.89□□□□□ -1.31
HDAC6-208ENST00000438518 NEBP20929 6669 aa6.86□□□□□ -1.31
HDAC6-208ENST00000438518 KRTAP19-7Q3SYF9 63 aa6.86□□□□□ -1.31
HDAC6-208ENST00000438518 KRTAP19-5Q3LI72 72 aa6.81□□□□□ -1.32
HDAC6-208ENST00000438518 PP632Q6XCG6 107 aa6.8□□□□□ -1.32
HDAC6-208ENST00000438518 MT1EP04732 61 aa6.79□□□□□ -1.32
HDAC6-208ENST00000438518 PRO0628Q9UI54 55 aa6.79□□□□□ -1.32
HDAC6-208ENST00000438518 PMAIP1Q13794 54 aa6.78□□□□□ -1.32
HDAC6-208ENST00000438518 SPRR2EP22531 72 aa6.76□□□□□ -1.33
HDAC6-208ENST00000438518 SPRR2BP35325 72 aa6.76□□□□□ -1.33
HDAC6-208ENST00000438518 SPRR2AP35326 72 aa6.76□□□□□ -1.33
HDAC6-208ENST00000438518 MDN1Q9NU22 5596 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms