RNA–Protein interactions for RNA: ENST00000437425.6

SGCE-205, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-205ENST00000437425 PSPHP1O15172 72 aa7.89□□□□□ -1.15
SGCE-205ENST00000437425 PRR15LQ9BU68 103 aa7.89□□□□□ -1.15
SGCE-205ENST00000437425 RBM12B-AS1Q9P1G2 102 aa7.88□□□□□ -1.15
SGCE-205ENST00000437425 RNF213Q63HN8 5207 aa7.88□□□□□ -1.15
SGCE-205ENST00000437425 Q5VV11 94 aa7.85□□□□□ -1.15
SGCE-205ENST00000437425 LRP2P98164 4655 aa7.83□□□□□ -1.16
SGCE-205ENST00000437425 A0A1B0GU69 56 aa7.83□□□□□ -1.16
SGCE-205ENST00000437425 SEC61GP60059 68 aa7.8□□□□□ -1.16
SGCE-205ENST00000437425 H1FX-AS1Q4G0G2 97 aa7.8□□□□□ -1.16
SGCE-205ENST00000437425 LPAP08519 4548 aa7.8□□□□□ -1.16
SGCE-205ENST00000437425 S4R3F8 94 aa7.77□□□□□ -1.17
SGCE-205ENST00000437425 A6NED7 52 aa7.72□□□□□ -1.17
SGCE-205ENST00000437425 BRK1Q8WUW1 75 aa7.72□□□□□ -1.17
SGCE-205ENST00000437425 LCA10Q71F78 164 aa7.7□□□□□ -1.18
SGCE-205ENST00000437425 MUC17Q685J3 4493 aa7.7□□□□□ -1.18
SGCE-205ENST00000437425 PRO0628Q9UI54 55 aa7.68□□□□□ -1.18
SGCE-205ENST00000437425 LOC100996750A0A140TA64 210 aa7.65□□□□□ -1.18
SGCE-205ENST00000437425 KRTAP4-6Q9BYQ5 205 aa7.65□□□□□ -1.18
SGCE-205ENST00000437425 UQCR11O14957 56 aa7.64□□□□□ -1.19
SGCE-205ENST00000437425 CDC42SE1Q9NRR8 79 aa7.62□□□□□ -1.19
SGCE-205ENST00000437425 CSAG1Q6PB30 78 aa7.61□□□□□ -1.19
SGCE-205ENST00000437425 KRTAP4-1Q9BYQ7 146 aa7.6□□□□□ -1.19
SGCE-205ENST00000437425 SPATA8Q6RVD6 105 aa7.54□□□□□ -1.2
SGCE-205ENST00000437425 A0A1B0GU33 70 aa7.53□□□□□ -1.2
SGCE-205ENST00000437425 MIR22HGQ0VDD5 57 aa7.53□□□□□ -1.2
SGCE-205ENST00000437425 H0YAA0 97 aa7.49□□□□□ -1.21
SGCE-205ENST00000437425 KRTAP19-2Q3LHN2 52 aa7.47□□□□□ -1.21
SGCE-205ENST00000437425 LCE2AQ5TA79 106 aaPredicted RBP7.47□□□□□ -1.21
SGCE-205ENST00000437425 MUC2Q02817 5179 aa7.45□□□□□ -1.22
SGCE-205ENST00000437425 KRTAP10-6P60371 365 aaPredicted RBP7.44□□□□□ -1.22
SGCE-205ENST00000437425 KRTAP9-2Q9BYQ4 174 aa7.43□□□□□ -1.22
SGCE-205ENST00000437425 ADM2Q7Z4H4 148 aa7.41□□□□□ -1.22
SGCE-205ENST00000437425 A8MU10 97 aa7.4□□□□□ -1.22
SGCE-205ENST00000437425 P0C880 135 aa7.33□□□□□ -1.24
SGCE-205ENST00000437425 PMAIP1Q13794 54 aa7.32□□□□□ -1.24
SGCE-205ENST00000437425 M0QZ58 72 aa7.32□□□□□ -1.24
SGCE-205ENST00000437425 KRTAP9-6A0A140TA67 174 aa7.3□□□□□ -1.24
SGCE-205ENST00000437425 FLGP20930 4061 aaPredicted RBP7.3□□□□□ -1.24
SGCE-205ENST00000437425 FAT4Q6V0I7 4981 aa7.27□□□□□ -1.25
SGCE-205ENST00000437425 K7ERS5 55 aa7.27□□□□□ -1.25
SGCE-205ENST00000437425 A6NN06 94 aa7.23□□□□□ -1.25
SGCE-205ENST00000437425 LCE2CQ5TA81 110 aa7.23□□□□□ -1.25
SGCE-205ENST00000437425 KRTAP13-4Q3LI77 160 aa7.21□□□□□ -1.26
SGCE-205ENST00000437425 R4GN34 69 aa7.17□□□□□ -1.26
SGCE-205ENST00000437425 CRIPTQ9P021 101 aa7.15□□□□□ -1.27
SGCE-205ENST00000437425 A0A0D9SG42 100 aa7.11□□□□□ -1.27
SGCE-205ENST00000437425 M0R2T5 61 aa7.11□□□□□ -1.27
SGCE-205ENST00000437425 MT1HP80294 61 aa7.11□□□□□ -1.27
SGCE-205ENST00000437425 KTN1-AS1Q86SY8 53 aa7.08□□□□□ -1.28
SGCE-205ENST00000437425 H3BS24 57 aa7.01□□□□□ -1.29
SGCE-205ENST00000437425 KRTAP12-1P59990 96 aa7.01□□□□□ -1.29
SGCE-205ENST00000437425 FSIP2Q5CZC0 6907 aa7□□□□□ -1.29
SGCE-205ENST00000437425 LORP23490 312 aaPredicted RBP7□□□□□ -1.29
SGCE-205ENST00000437425 SPINT4Q6UDR6 99 aa6.98□□□□□ -1.29
SGCE-205ENST00000437425 LINC01554Q52M75 96 aa6.97□□□□□ -1.29
SGCE-205ENST00000437425 KRTAP12-2P59991 146 aa6.96□□□□□ -1.29
SGCE-205ENST00000437425 CRCT1Q9UGL9 99 aa6.94□□□□□ -1.3
SGCE-205ENST00000437425 ROMO1P60602 79 aa6.91□□□□□ -1.3
SGCE-205ENST00000437425 KRTAP4-8Q9BYQ9 185 aa6.87□□□□□ -1.31
SGCE-205ENST00000437425 SPRR2GQ9BYE4 73 aa6.86□□□□□ -1.31
SGCE-205ENST00000437425 KRTAP9-8Q9BYQ0 159 aa6.86□□□□□ -1.31
SGCE-205ENST00000437425 MT2AP02795 61 aa6.86□□□□□ -1.31
SGCE-205ENST00000437425 KRTAP10-10P60014 251 aa6.84□□□□□ -1.31
SGCE-205ENST00000437425 MT1FP04733 61 aa6.8□□□□□ -1.32
SGCE-205ENST00000437425 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.78□□□□□ -1.32
SGCE-205ENST00000437425 KRTAP19-1Q8IUB9 90 aa6.76□□□□□ -1.33
SGCE-205ENST00000437425 CAMK2N1Q7Z7J9 78 aa6.74□□□□□ -1.33
SGCE-205ENST00000437425 PRAC1Q96KF2 57 aa6.73□□□□□ -1.33
SGCE-205ENST00000437425 PLAC4Q8WY50 150 aa6.71□□□□□ -1.33
SGCE-205ENST00000437425 KRTAP25-1Q3LHN0 102 aa6.66□□□□□ -1.34
SGCE-205ENST00000437425 KRTAP19-8Q3LI54 63 aa6.66□□□□□ -1.34
SGCE-205ENST00000437425 KRTAP9-3Q9BYQ3 159 aa6.61□□□□□ -1.35
SGCE-205ENST00000437425 C10orf95Q9H7T3 257 aa6.6□□□□□ -1.35
SGCE-205ENST00000437425 KRTAP9-7A8MTY7 169 aa6.53□□□□□ -1.36
SGCE-205ENST00000437425 LCE3BQ5TA77 95 aa6.51□□□□□ -1.37
SGCE-205ENST00000437425 MT1BP07438 61 aa6.48□□□□□ -1.37
SGCE-205ENST00000437425 TNP1P09430 55 aa6.47□□□□□ -1.37
SGCE-205ENST00000437425 PP632Q6XCG6 107 aa6.43□□□□□ -1.38
SGCE-205ENST00000437425 KRTAP9-9Q9BYP9 154 aa6.42□□□□□ -1.38
SGCE-205ENST00000437425 KRTAP9-4Q9BYQ2 154 aa6.42□□□□□ -1.38
SGCE-205ENST00000437425 KRTAP4-12Q9BQ66 201 aa6.41□□□□□ -1.38
SGCE-205ENST00000437425 KRTAP23-1A1A580 65 aa6.4□□□□□ -1.39
SGCE-205ENST00000437425 USH2AO75445 5202 aa6.39□□□□□ -1.39
SGCE-205ENST00000437425 KRTAP4-8A0A0G2JLE6 195 aa6.39□□□□□ -1.39
SGCE-205ENST00000437425 SSPOA2VEC9 5147 aa6.39□□□□□ -1.39
SGCE-205ENST00000437425 PRO2289Q9P1D8 64 aa6.38□□□□□ -1.39
SGCE-205ENST00000437425 KRTAP10-5P60370 271 aa6.31□□□□□ -1.4
SGCE-205ENST00000437425 MT1XP80297 61 aa6.31□□□□□ -1.4
SGCE-205ENST00000437425 FCGBPQ9Y6R7 5405 aaPredicted RBP6.3□□□□□ -1.4
SGCE-205ENST00000437425 SYNE2Q8WXH0 6885 aaKnown RBP6.19□□□□□ -1.42
SGCE-205ENST00000437425 KRTAP4-7Q9BYR0 210 aa6.19□□□□□ -1.42
SGCE-205ENST00000437425 MACF1Q9UPN3 7388 aaKnown RBP6.18□□□□□ -1.42
SGCE-205ENST00000437425 A0A0A0MQY5 61 aa6.12□□□□□ -1.43
SGCE-205ENST00000437425 KRTAP10-12P60413 245 aa6.09□□□□□ -1.43
SGCE-205ENST00000437425 LCE1DQ5T752 114 aa6.08□□□□□ -1.44
SGCE-205ENST00000437425 LCE3AQ5TA76 89 aa6.06□□□□□ -1.44
SGCE-205ENST00000437425 KRTAP10-7P60409 375 aaPredicted RBP6.04□□□□□ -1.44
SGCE-205ENST00000437425 KRTAP19-6Q3LI70 58 aa6.02□□□□□ -1.45
SGCE-205ENST00000437425 KRTAP8-1Q8IUC2 63 aa6.02□□□□□ -1.45
SGCE-205ENST00000437425 KRTAP4-9Q9BYQ8 210 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms