RNA–Protein interactions for RNA: ENST00000437212.7

TMPRSS4-201, Transcript of transmembrane serine protease 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMPRSS4, Length 2,074 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMPRSS4-201ENST00000437212 S4R3F8 94 aa8.12□□□□□ -1.11
TMPRSS4-201ENST00000437212 XP32Q5T750 250 aa8.11□□□□□ -1.11
TMPRSS4-201ENST00000437212 Q5VSD8 79 aa8.08□□□□□ -1.12
TMPRSS4-201ENST00000437212 ROMO1P60602 79 aa8.07□□□□□ -1.12
TMPRSS4-201ENST00000437212 RYR3Q15413 4870 aa8.07□□□□□ -1.12
TMPRSS4-201ENST00000437212 KRTAP3-2Q9BYR7 98 aa8.06□□□□□ -1.12
TMPRSS4-201ENST00000437212 FAT3Q8TDW7 4589 aa8.03□□□□□ -1.12
TMPRSS4-201ENST00000437212 KRTAP13-4Q3LI77 160 aa8.03□□□□□ -1.12
TMPRSS4-201ENST00000437212 TNXBP22105 4242 aa8.02□□□□□ -1.13
TMPRSS4-201ENST00000437212 A0A0D9SG42 100 aa7.98□□□□□ -1.13
TMPRSS4-201ENST00000437212 DMBT1Q9UGM3 2413 aaPredicted RBP7.97□□□□□ -1.13
TMPRSS4-201ENST00000437212 CRIPTQ9P021 101 aa7.96□□□□□ -1.14
TMPRSS4-201ENST00000437212 P0C880 135 aa7.93□□□□□ -1.14
TMPRSS4-201ENST00000437212 LRP1Q07954 4544 aaKnown RBP7.9□□□□□ -1.14
TMPRSS4-201ENST00000437212 HSPG2P98160 4391 aa7.89□□□□□ -1.15
TMPRSS4-201ENST00000437212 MT1HL1P0DM35 61 aa7.87□□□□□ -1.15
TMPRSS4-201ENST00000437212 TPRXLQ17RH7 258 aa7.81□□□□□ -1.16
TMPRSS4-201ENST00000437212 H3BS24 57 aa7.8□□□□□ -1.16
TMPRSS4-201ENST00000437212 KRTAP12-2P59991 146 aa7.8□□□□□ -1.16
TMPRSS4-201ENST00000437212 EPPK1P58107 5090 aaKnown RBP7.79□□□□□ -1.16
TMPRSS4-201ENST00000437212 M0QZ58 72 aa7.79□□□□□ -1.16
TMPRSS4-201ENST00000437212 KRTAP12-1P59990 96 aa7.77□□□□□ -1.17
TMPRSS4-201ENST00000437212 KRTAP17-1Q9BYP8 105 aa7.77□□□□□ -1.17
TMPRSS4-201ENST00000437212 SPINT4Q6UDR6 99 aa7.74□□□□□ -1.17
TMPRSS4-201ENST00000437212 RYR1P21817 5038 aa7.73□□□□□ -1.17
TMPRSS4-201ENST00000437212 C10orf95Q9H7T3 257 aa7.69□□□□□ -1.18
TMPRSS4-201ENST00000437212 KIAA1109Q2LD37 5005 aa7.66□□□□□ -1.18
TMPRSS4-201ENST00000437212 MYCBP2O75592 4640 aa7.64□□□□□ -1.19
TMPRSS4-201ENST00000437212 BIRC6Q9NR09 4857 aa7.58□□□□□ -1.2
TMPRSS4-201ENST00000437212 SEC61BP60468 96 aaKnown RBP7.53□□□□□ -1.2
TMPRSS4-201ENST00000437212 R4GN34 69 aa7.53□□□□□ -1.2
TMPRSS4-201ENST00000437212 KRTAP15-1Q3LI76 137 aa7.51□□□□□ -1.21
TMPRSS4-201ENST00000437212 KRTAP4-5Q9BYR2 181 aa7.48□□□□□ -1.21
TMPRSS4-201ENST00000437212 LRP2P98164 4655 aa7.47□□□□□ -1.21
TMPRSS4-201ENST00000437212 LPAP08519 4548 aa7.46□□□□□ -1.22
TMPRSS4-201ENST00000437212 HERC2O95714 4834 aa7.44□□□□□ -1.22
TMPRSS4-201ENST00000437212 ABCA13Q86UQ4 5058 aa7.33□□□□□ -1.24
TMPRSS4-201ENST00000437212 NDUFAF8A1L188 74 aa7.32□□□□□ -1.24
TMPRSS4-201ENST00000437212 LORP23490 312 aaPredicted RBP7.32□□□□□ -1.24
TMPRSS4-201ENST00000437212 KRTAP4-1Q9BYQ7 146 aa7.3□□□□□ -1.24
TMPRSS4-201ENST00000437212 J3QL48 77 aa7.26□□□□□ -1.25
TMPRSS4-201ENST00000437212 MUC17Q685J3 4493 aa7.24□□□□□ -1.25
TMPRSS4-201ENST00000437212 KRTAP19-2Q3LHN2 52 aa7.23□□□□□ -1.25
TMPRSS4-201ENST00000437212 PCLOQ9Y6V0 5065 aa7.18□□□□□ -1.26
TMPRSS4-201ENST00000437212 PP632Q6XCG6 107 aa7.18□□□□□ -1.26
TMPRSS4-201ENST00000437212 CAMK2N1Q7Z7J9 78 aa7.16□□□□□ -1.26
TMPRSS4-201ENST00000437212 PLAC4Q8WY50 150 aa7.16□□□□□ -1.26
TMPRSS4-201ENST00000437212 HERC1Q15751 4861 aa6.95□□□□□ -1.3
TMPRSS4-201ENST00000437212 KRTAP23-1A1A580 65 aa6.93□□□□□ -1.3
TMPRSS4-201ENST00000437212 TNP1P09430 55 aa6.93□□□□□ -1.3
TMPRSS4-201ENST00000437212 FLGP20930 4061 aaPredicted RBP6.93□□□□□ -1.3
TMPRSS4-201ENST00000437212 LUZP6Q538Z0 58 aa6.89□□□□□ -1.31
TMPRSS4-201ENST00000437212 HMCN2Q8NDA2 5059 aa6.83□□□□□ -1.32
TMPRSS4-201ENST00000437212 SPRR2GQ9BYE4 73 aa6.76□□□□□ -1.33
TMPRSS4-201ENST00000437212 LCE2CQ5TA81 110 aa6.74□□□□□ -1.33
TMPRSS4-201ENST00000437212 MUC2Q02817 5179 aa6.68□□□□□ -1.34
TMPRSS4-201ENST00000437212 SPRR5A0A1B0GTR4 108 aa6.67□□□□□ -1.34
TMPRSS4-201ENST00000437212 KRTAP19-1Q8IUB9 90 aa6.67□□□□□ -1.34
TMPRSS4-201ENST00000437212 M0R2T5 61 aa6.62□□□□□ -1.35
TMPRSS4-201ENST00000437212 A0A0A0MQY5 61 aa6.62□□□□□ -1.35
TMPRSS4-201ENST00000437212 UBR4Q5T4S7 5183 aa6.57□□□□□ -1.36
TMPRSS4-201ENST00000437212 MT1HP80294 61 aa6.56□□□□□ -1.36
TMPRSS4-201ENST00000437212 MT2AP02795 61 aa6.5□□□□□ -1.37
TMPRSS4-201ENST00000437212 KRTAP10-10P60014 251 aa6.5□□□□□ -1.37
TMPRSS4-201ENST00000437212 LCE3AQ5TA76 89 aa6.49□□□□□ -1.37
TMPRSS4-201ENST00000437212 MT1FP04733 61 aa6.48□□□□□ -1.37
TMPRSS4-201ENST00000437212 RNF213Q63HN8 5207 aa6.47□□□□□ -1.37
TMPRSS4-201ENST00000437212 KRTAP19-8Q3LI54 63 aa6.45□□□□□ -1.38
TMPRSS4-201ENST00000437212 KRTAP9-8Q9BYQ0 159 aa6.43□□□□□ -1.38
TMPRSS4-201ENST00000437212 KRTAP8-1Q8IUC2 63 aa6.38□□□□□ -1.39
TMPRSS4-201ENST00000437212 FAT4Q6V0I7 4981 aa6.35□□□□□ -1.39
TMPRSS4-201ENST00000437212 MT1BP07438 61 aa6.31□□□□□ -1.4
TMPRSS4-201ENST00000437212 KRTAP10-5P60370 271 aa6.31□□□□□ -1.4
TMPRSS4-201ENST00000437212 MT1XP80297 61 aa6.29□□□□□ -1.4
TMPRSS4-201ENST00000437212 KRTAP10-12P60413 245 aa6.24□□□□□ -1.41
TMPRSS4-201ENST00000437212 KRTAP12-3P60328 96 aa6.21□□□□□ -1.42
TMPRSS4-201ENST00000437212 KRTAP9-3Q9BYQ3 159 aa6.16□□□□□ -1.42
TMPRSS4-201ENST00000437212 PRO2289Q9P1D8 64 aa6.14□□□□□ -1.43
TMPRSS4-201ENST00000437212 KRTAP10-7P60409 375 aaPredicted RBP6.1□□□□□ -1.43
TMPRSS4-201ENST00000437212 LCE2AQ5TA79 106 aaPredicted RBP6.06□□□□□ -1.44
TMPRSS4-201ENST00000437212 INE1O15225 51 aa6□□□□□ -1.45
TMPRSS4-201ENST00000437212 KRTAP19-5Q3LI72 72 aa5.89□□□□□ -1.47
TMPRSS4-201ENST00000437212 LCE2BO14633 110 aa5.86□□□□□ -1.47
TMPRSS4-201ENST00000437212 LCE3CQ5T5A8 94 aa5.86□□□□□ -1.47
TMPRSS4-201ENST00000437212 KRTAP4-8A0A0G2JLE6 195 aa5.65□□□□□ -1.5
TMPRSS4-201ENST00000437212 KRTAP4-8Q9BYQ9 185 aa5.65□□□□□ -1.5
TMPRSS4-201ENST00000437212 KRTAP19-4Q3LI73 84 aa5.65□□□□□ -1.51
TMPRSS4-201ENST00000437212 KRTAP19-7Q3SYF9 63 aa5.6□□□□□ -1.51
TMPRSS4-201ENST00000437212 LCE2DQ5TA82 110 aaPredicted RBP5.58□□□□□ -1.52
TMPRSS4-201ENST00000437212 KRTAP9-6A8MVA2 160 aa5.57□□□□□ -1.52
TMPRSS4-201ENST00000437212 KRTAP2-3P0C7H8 128 aa5.49□□□□□ -1.53
TMPRSS4-201ENST00000437212 KRTAP2-4Q9BYR9 128 aa5.49□□□□□ -1.53
TMPRSS4-201ENST00000437212 KRTAP2-1Q9BYU5 128 aa5.49□□□□□ -1.53
TMPRSS4-201ENST00000437212 KMT2DO14686 5537 aa5.48□□□□□ -1.53
TMPRSS4-201ENST00000437212 USH2AO75445 5202 aa5.47□□□□□ -1.53
TMPRSS4-201ENST00000437212 MT1LQ93083 61 aa5.47□□□□□ -1.53
TMPRSS4-201ENST00000437212 KRTAP9-2Q9BYQ4 174 aa5.47□□□□□ -1.53
TMPRSS4-201ENST00000437212 MT1EP04732 61 aa5.45□□□□□ -1.54
TMPRSS4-201ENST00000437212 KRTAP4-7Q9BYR0 210 aa5.44□□□□□ -1.54
TMPRSS4-201ENST00000437212 FSIP2Q5CZC0 6907 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms