RNA–Protein interactions for RNA: ENST00000436066.3

PLEKHF1-201, Transcript of pleckstrin homology and FYVE domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PLEKHF1, Length 2,084 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLEKHF1-201ENST00000436066 KTN1-AS1Q86SY8 53 aa13.08□□□□□ -0.32
PLEKHF1-201ENST00000436066 MIR22HGQ0VDD5 57 aa13.07□□□□□ -0.32
PLEKHF1-201ENST00000436066 KRTAP4-5Q9BYR2 181 aa13.04□□□□□ -0.32
PLEKHF1-201ENST00000436066 TPRXLQ17RH7 258 aa12.97□□□□□ -0.33
PLEKHF1-201ENST00000436066 ABCA13Q86UQ4 5058 aa12.86□□□□□ -0.35
PLEKHF1-201ENST00000436066 KRTAP3-3Q9BYR6 98 aa12.84□□□□□ -0.35
PLEKHF1-201ENST00000436066 A0A1B0GU33 70 aa12.82□□□□□ -0.36
PLEKHF1-201ENST00000436066 LRP2P98164 4655 aa12.8□□□□□ -0.36
PLEKHF1-201ENST00000436066 S4R3F8 94 aa12.79□□□□□ -0.36
PLEKHF1-201ENST00000436066 H1FX-AS1Q4G0G2 97 aa12.79□□□□□ -0.36
PLEKHF1-201ENST00000436066 H0YAA0 97 aa12.77□□□□□ -0.36
PLEKHF1-201ENST00000436066 LPAP08519 4548 aa12.77□□□□□ -0.37
PLEKHF1-201ENST00000436066 BIRC6Q9NR09 4857 aa12.68□□□□□ -0.38
PLEKHF1-201ENST00000436066 J3QL48 77 aa12.65□□□□□ -0.38
PLEKHF1-201ENST00000436066 RBM12B-AS1Q9P1G2 102 aa12.63□□□□□ -0.39
PLEKHF1-201ENST00000436066 HERC2O95714 4834 aa12.6□□□□□ -0.39
PLEKHF1-201ENST00000436066 KRTAP10-6P60371 365 aaPredicted RBP12.59□□□□□ -0.39
PLEKHF1-201ENST00000436066 KRTAP3-2Q9BYR7 98 aa12.53□□□□□ -0.4
PLEKHF1-201ENST00000436066 SEC61BP60468 96 aaKnown RBP12.5□□□□□ -0.41
PLEKHF1-201ENST00000436066 ADM2Q7Z4H4 148 aa12.49□□□□□ -0.41
PLEKHF1-201ENST00000436066 PRAC1Q96KF2 57 aa12.49□□□□□ -0.41
PLEKHF1-201ENST00000436066 P0C880 135 aa12.41□□□□□ -0.42
PLEKHF1-201ENST00000436066 CSAG1Q6PB30 78 aa12.4□□□□□ -0.42
PLEKHF1-201ENST00000436066 KRTAP13-4Q3LI77 160 aa12.39□□□□□ -0.43
PLEKHF1-201ENST00000436066 KRTAP4-1Q9BYQ7 146 aa12.31□□□□□ -0.44
PLEKHF1-201ENST00000436066 K7ERS5 55 aa12.3□□□□□ -0.44
PLEKHF1-201ENST00000436066 MUC17Q685J3 4493 aa12.28□□□□□ -0.44
PLEKHF1-201ENST00000436066 A0A0D9SG42 100 aa12.26□□□□□ -0.45
PLEKHF1-201ENST00000436066 PCLOQ9Y6V0 5065 aa12.13□□□□□ -0.47
PLEKHF1-201ENST00000436066 LINC01554Q52M75 96 aa12.06□□□□□ -0.48
PLEKHF1-201ENST00000436066 KRTAP19-2Q3LHN2 52 aa12.03□□□□□ -0.48
PLEKHF1-201ENST00000436066 M0QZ58 72 aa12.02□□□□□ -0.48
PLEKHF1-201ENST00000436066 HERC1Q15751 4861 aa11.97□□□□□ -0.49
PLEKHF1-201ENST00000436066 KRTAP12-2P59991 146 aa11.96□□□□□ -0.49
PLEKHF1-201ENST00000436066 KRTAP25-1Q3LHN0 102 aa11.95□□□□□ -0.5
PLEKHF1-201ENST00000436066 ROMO1P60602 79 aa11.93□□□□□ -0.5
PLEKHF1-201ENST00000436066 KRTAP12-1P59990 96 aa11.91□□□□□ -0.5
PLEKHF1-201ENST00000436066 SPINT4Q6UDR6 99 aa11.9□□□□□ -0.5
PLEKHF1-201ENST00000436066 MUC2Q02817 5179 aa11.9□□□□□ -0.5
PLEKHF1-201ENST00000436066 HMCN2Q8NDA2 5059 aa11.86□□□□□ -0.51
PLEKHF1-201ENST00000436066 R4GN34 69 aa11.85□□□□□ -0.51
PLEKHF1-201ENST00000436066 CRIPTQ9P021 101 aa11.81□□□□□ -0.52
PLEKHF1-201ENST00000436066 LORP23490 312 aaPredicted RBP11.79□□□□□ -0.52
PLEKHF1-201ENST00000436066 FLGP20930 4061 aaPredicted RBP11.67□□□□□ -0.54
PLEKHF1-201ENST00000436066 LCE2CQ5TA81 110 aa11.48□□□□□ -0.57
PLEKHF1-201ENST00000436066 C10orf95Q9H7T3 257 aa11.48□□□□□ -0.57
PLEKHF1-201ENST00000436066 FAT4Q6V0I7 4981 aa11.34□□□□□ -0.59
PLEKHF1-201ENST00000436066 UBR4Q5T4S7 5183 aa11.34□□□□□ -0.59
PLEKHF1-201ENST00000436066 RNF213Q63HN8 5207 aa11.32□□□□□ -0.6
PLEKHF1-201ENST00000436066 M0R2T5 61 aa11.23□□□□□ -0.61
PLEKHF1-201ENST00000436066 MT1HP80294 61 aa11.21□□□□□ -0.61
PLEKHF1-201ENST00000436066 CAMK2N1Q7Z7J9 78 aa11.2□□□□□ -0.62
PLEKHF1-201ENST00000436066 SPRR2GQ9BYE4 73 aa11□□□□□ -0.65
PLEKHF1-201ENST00000436066 KRTAP19-1Q8IUB9 90 aa10.96□□□□□ -0.65
PLEKHF1-201ENST00000436066 MT2AP02795 61 aa10.93□□□□□ -0.66
PLEKHF1-201ENST00000436066 MT1FP04733 61 aa10.91□□□□□ -0.66
PLEKHF1-201ENST00000436066 KRTAP10-10P60014 251 aa10.91□□□□□ -0.66
PLEKHF1-201ENST00000436066 KRTAP9-8Q9BYQ0 159 aa10.89□□□□□ -0.67
PLEKHF1-201ENST00000436066 PLAC4Q8WY50 150 aa10.83□□□□□ -0.68
PLEKHF1-201ENST00000436066 KRTAP15-1Q3LI76 137 aa10.83□□□□□ -0.68
PLEKHF1-201ENST00000436066 TNP1P09430 55 aa10.72□□□□□ -0.69
PLEKHF1-201ENST00000436066 PP632Q6XCG6 107 aa10.72□□□□□ -0.69
PLEKHF1-201ENST00000436066 KRTAP19-8Q3LI54 63 aa10.59□□□□□ -0.71
PLEKHF1-201ENST00000436066 H3BS24 57 aa10.56□□□□□ -0.72
PLEKHF1-201ENST00000436066 KRTAP23-1A1A580 65 aa10.48□□□□□ -0.73
PLEKHF1-201ENST00000436066 MT1BP07438 61 aa10.46□□□□□ -0.74
PLEKHF1-201ENST00000436066 KRTAP9-3Q9BYQ3 159 aa10.45□□□□□ -0.74
PLEKHF1-201ENST00000436066 NDUFAF8A1L188 74 aa10.39□□□□□ -0.75
PLEKHF1-201ENST00000436066 KRTAP10-5P60370 271 aa10.29□□□□□ -0.76
PLEKHF1-201ENST00000436066 MT1XP80297 61 aa10.28□□□□□ -0.76
PLEKHF1-201ENST00000436066 LCE2AQ5TA79 106 aaPredicted RBP10.26□□□□□ -0.77
PLEKHF1-201ENST00000436066 LCE3AQ5TA76 89 aa10.21□□□□□ -0.78
PLEKHF1-201ENST00000436066 LCE2BO14633 110 aa10.1□□□□□ -0.79
PLEKHF1-201ENST00000436066 PRO2289Q9P1D8 64 aa10.01□□□□□ -0.81
PLEKHF1-201ENST00000436066 KRTAP10-12P60413 245 aa9.97□□□□□ -0.81
PLEKHF1-201ENST00000436066 KRTAP10-7P60409 375 aaPredicted RBP9.96□□□□□ -0.81
PLEKHF1-201ENST00000436066 KRTAP8-1Q8IUC2 63 aa9.95□□□□□ -0.82
PLEKHF1-201ENST00000436066 LUZP6Q538Z0 58 aa9.94□□□□□ -0.82
PLEKHF1-201ENST00000436066 SPRR5A0A1B0GTR4 108 aa9.87□□□□□ -0.83
PLEKHF1-201ENST00000436066 USH2AO75445 5202 aa9.83□□□□□ -0.84
PLEKHF1-201ENST00000436066 KRTAP12-3P60328 96 aa9.75□□□□□ -0.85
PLEKHF1-201ENST00000436066 KRTAP19-5Q3LI72 72 aa9.48□□□□□ -0.89
PLEKHF1-201ENST00000436066 KMT2DO14686 5537 aa9.44□□□□□ -0.9
PLEKHF1-201ENST00000436066 KRTAP4-8A0A0G2JLE6 195 aa9.44□□□□□ -0.9
PLEKHF1-201ENST00000436066 KRTAP4-8Q9BYQ9 185 aa9.44□□□□□ -0.9
PLEKHF1-201ENST00000436066 SSPOA2VEC9 5147 aa9.35□□□□□ -0.91
PLEKHF1-201ENST00000436066 A0A0A0MQY5 61 aa9.27□□□□□ -0.93
PLEKHF1-201ENST00000436066 KRTAP19-6Q3LI70 58 aa9.22□□□□□ -0.93
PLEKHF1-201ENST00000436066 KRTAP19-7Q3SYF9 63 aa9.17□□□□□ -0.94
PLEKHF1-201ENST00000436066 LCE3CQ5T5A8 94 aa9.15□□□□□ -0.94
PLEKHF1-201ENST00000436066 FSIP2Q5CZC0 6907 aa9.14□□□□□ -0.95
PLEKHF1-201ENST00000436066 LCE2DQ5TA82 110 aaPredicted RBP9.13□□□□□ -0.95
PLEKHF1-201ENST00000436066 MT1EP04732 61 aa8.94□□□□□ -0.98
PLEKHF1-201ENST00000436066 MT1LQ93083 61 aa8.87□□□□□ -0.99
PLEKHF1-201ENST00000436066 KRTAP4-7Q9BYR0 210 aa8.84□□□□□ -0.99
PLEKHF1-201ENST00000436066 KRTAP19-4Q3LI73 84 aa8.8□□□□□ -1
PLEKHF1-201ENST00000436066 FCGBPQ9Y6R7 5405 aaPredicted RBP8.79□□□□□ -1
PLEKHF1-201ENST00000436066 KRTAP9-6A8MVA2 160 aa8.76□□□□□ -1.01
PLEKHF1-201ENST00000436066 KRTAP9-2Q9BYQ4 174 aa8.72□□□□□ -1.01
PLEKHF1-201ENST00000436066 INE1O15225 51 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms