RNA–Protein interactions for RNA: ENST00000435986.1

HMGB1P45-201, Transcript of high mobility group box 1 pseudogene 45, humanhuman

BASIC

Gene HMGB1P45, Length 653 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P45-201ENST00000435986 DEFB106AQ8N104 65 aa1.15□□□□□ -2.23
HMGB1P45-201ENST00000435986 EPPK1P58107 5090 aaKnown RBP1.15□□□□□ -2.23
HMGB1P45-201ENST00000435986 WT1-ASQ06250 92 aa1.14□□□□□ -2.23
HMGB1P45-201ENST00000435986 DEFB110Q30KQ9 67 aa1.14□□□□□ -2.23
HMGB1P45-201ENST00000435986 COX14Q96I36 57 aa1.13□□□□□ -2.23
HMGB1P45-201ENST00000435986 ANK2Q01484 3957 aa1.13□□□□□ -2.23
HMGB1P45-201ENST00000435986 NOTCH1P46531 2555 aa1.12□□□□□ -2.23
HMGB1P45-201ENST00000435986 H3BUA1 57 aa1.12□□□□□ -2.23
HMGB1P45-201ENST00000435986 STATHP02808 62 aa1.12□□□□□ -2.23
HMGB1P45-201ENST00000435986 WFDC10BQ8IUB3 73 aa1.12□□□□□ -2.23
HMGB1P45-201ENST00000435986 HMCN1Q96RW7 5635 aa1.12□□□□□ -2.23
HMGB1P45-201ENST00000435986 HYDINQ4G0P3 5121 aa1.12□□□□□ -2.23
HMGB1P45-201ENST00000435986 TENM2Q9NT68 2774 aa1.12□□□□□ -2.23
HMGB1P45-201ENST00000435986 TRRAPQ9Y4A5 3859 aa1.12□□□□□ -2.23
HMGB1P45-201ENST00000435986 ANK3Q12955 4377 aaKnown RBP1.11□□□□□ -2.23
HMGB1P45-201ENST00000435986 ALMS1Q8TCU4 4167 aa1.1□□□□□ -2.23
HMGB1P45-201ENST00000435986 TENM3Q9P273 2699 aa1.1□□□□□ -2.23
HMGB1P45-201ENST00000435986 PCLOQ9Y6V0 5065 aa1.09□□□□□ -2.23
HMGB1P45-201ENST00000435986 DEFB108AA8MXU0 73 aa1.09□□□□□ -2.23
HMGB1P45-201ENST00000435986 KAAG1Q9UBP8 84 aa1.09□□□□□ -2.23
HMGB1P45-201ENST00000435986 PRKDCP78527 4128 aaKnown RBP1.09□□□□□ -2.24
HMGB1P45-201ENST00000435986 BIRC6Q9NR09 4857 aa1.09□□□□□ -2.24
HMGB1P45-201ENST00000435986 S4R3F8 94 aa1.08□□□□□ -2.24
HMGB1P45-201ENST00000435986 RYR2Q92736 4967 aa1.07□□□□□ -2.24
HMGB1P45-201ENST00000435986 H0YGG7 62 aa1.07□□□□□ -2.24
HMGB1P45-201ENST00000435986 PRLHP81277 87 aa1.07□□□□□ -2.24
HMGB1P45-201ENST00000435986 LYSTQ99698 3801 aa1.06□□□□□ -2.24
HMGB1P45-201ENST00000435986 SPINK6Q6UWN8 80 aa1.06□□□□□ -2.24
HMGB1P45-201ENST00000435986 CMYA5Q8N3K9 4069 aa1.06□□□□□ -2.24
HMGB1P45-201ENST00000435986 FRAS1Q86XX4 4008 aa1.04□□□□□ -2.24
HMGB1P45-201ENST00000435986 IGLV5-48A0A075B6I7 105 aa1.04□□□□□ -2.24
HMGB1P45-201ENST00000435986 DEFB131AP59861 70 aa1.04□□□□□ -2.24
HMGB1P45-201ENST00000435986 HERC2O95714 4834 aa1.04□□□□□ -2.24
HMGB1P45-201ENST00000435986 WNK1Q9H4A3 2382 aa1.04□□□□□ -2.24
HMGB1P45-201ENST00000435986 KIAA1109Q2LD37 5005 aa1.04□□□□□ -2.24
HMGB1P45-201ENST00000435986 STARD9Q9P2P6 4700 aa1.03□□□□□ -2.24
HMGB1P45-201ENST00000435986 RYR1P21817 5038 aa1.03□□□□□ -2.24
HMGB1P45-201ENST00000435986 ABCA13Q86UQ4 5058 aa1.03□□□□□ -2.24
HMGB1P45-201ENST00000435986 DNAH7Q8WXX0 4024 aa1.02□□□□□ -2.25
HMGB1P45-201ENST00000435986 STAB2Q8WWQ8 2551 aa1.02□□□□□ -2.25
HMGB1P45-201ENST00000435986 SACSQ9NZJ4 4579 aa1.01□□□□□ -2.25
HMGB1P45-201ENST00000435986 UBR4Q5T4S7 5183 aa1.01□□□□□ -2.25
HMGB1P45-201ENST00000435986 DNAH9Q9NYC9 4486 aa1□□□□□ -2.25
HMGB1P45-201ENST00000435986 MMP24-AS1A0A0U1RRL7 71 aa1□□□□□ -2.25
HMGB1P45-201ENST00000435986 SPINK1P00995 79 aa1□□□□□ -2.25
HMGB1P45-201ENST00000435986 DEFB108BQ8NET1 73 aa1□□□□□ -2.25
HMGB1P45-201ENST00000435986 NOP10Q9NPE3 64 aaKnown RBP1□□□□□ -2.25
HMGB1P45-201ENST00000435986 HERC1Q15751 4861 aa1□□□□□ -2.25
HMGB1P45-201ENST00000435986 DYNC2H1Q8NCM8 4307 aaKnown RBP0.99□□□□□ -2.25
HMGB1P45-201ENST00000435986 DNAH3Q8TD57 4116 aa0.99□□□□□ -2.25
HMGB1P45-201ENST00000435986 PLECQ15149 4684 aaKnown RBP0.99□□□□□ -2.25
HMGB1P45-201ENST00000435986 DNAH1Q9P2D7 4330 aa0.98□□□□□ -2.25
HMGB1P45-201ENST00000435986 HECTD4Q9Y4D8 3996 aa0.98□□□□□ -2.25
HMGB1P45-201ENST00000435986 DEFB135Q30KP9 77 aa0.98□□□□□ -2.25
HMGB1P45-201ENST00000435986 PKD1P98161 4303 aa0.98□□□□□ -2.25
HMGB1P45-201ENST00000435986 SRRM2Q9UQ35 2752 aaKnown RBP0.96□□□□□ -2.26
HMGB1P45-201ENST00000435986 HUWE1Q7Z6Z7 4374 aaKnown RBP0.95□□□□□ -2.26
HMGB1P45-201ENST00000435986 H3BUX3 64 aa0.95□□□□□ -2.26
HMGB1P45-201ENST00000435986 M0R2T5 61 aa0.95□□□□□ -2.26
HMGB1P45-201ENST00000435986 APOBP04114 4563 aaKnown RBP0.94□□□□□ -2.26
HMGB1P45-201ENST00000435986 HSPG2P98160 4391 aa0.94□□□□□ -2.26
HMGB1P45-201ENST00000435986 POLR2KP53803 58 aaKnown RBP0.94□□□□□ -2.26
HMGB1P45-201ENST00000435986 DEFB136Q30KP8 78 aa0.94□□□□□ -2.26
HMGB1P45-201ENST00000435986 KMT2AQ03164 3969 aa0.94□□□□□ -2.26
HMGB1P45-201ENST00000435986 RNF213Q63HN8 5207 aa0.93□□□□□ -2.26
HMGB1P45-201ENST00000435986 DNAH10Q8IVF4 4471 aa0.93□□□□□ -2.26
HMGB1P45-201ENST00000435986 DNAH2Q9P225 4427 aa0.93□□□□□ -2.26
HMGB1P45-201ENST00000435986 MYCBP2O75592 4640 aa0.93□□□□□ -2.26
HMGB1P45-201ENST00000435986 PKHD1P08F94 4074 aa0.93□□□□□ -2.26
HMGB1P45-201ENST00000435986 RPL39P62891 51 aaKnown RBP0.92□□□□□ -2.26
HMGB1P45-201ENST00000435986 KRTAP19-3Q7Z4W3 81 aa0.92□□□□□ -2.26
HMGB1P45-201ENST00000435986 VPS13DQ5THJ4 4388 aa0.92□□□□□ -2.26
HMGB1P45-201ENST00000435986 DYNC1H1Q14204 4646 aaKnown RBP0.92□□□□□ -2.26
HMGB1P45-201ENST00000435986 DMBT1Q9UGM3 2413 aaPredicted RBP0.91□□□□□ -2.26
HMGB1P45-201ENST00000435986 H3BSH0 61 aa0.91□□□□□ -2.26
HMGB1P45-201ENST00000435986 FAT2Q9NYQ8 4349 aa0.91□□□□□ -2.26
HMGB1P45-201ENST00000435986 DNAH17Q9UFH2 4485 aa0.91□□□□□ -2.26
HMGB1P45-201ENST00000435986 M0QY20 66 aa0.9□□□□□ -2.27
HMGB1P45-201ENST00000435986 KRTAP2-3P0C7H8 128 aa0.9□□□□□ -2.27
HMGB1P45-201ENST00000435986 KRTAP2-4Q9BYR9 128 aa0.9□□□□□ -2.27
HMGB1P45-201ENST00000435986 KRTAP2-1Q9BYU5 128 aa0.9□□□□□ -2.27
HMGB1P45-201ENST00000435986 HMCN2Q8NDA2 5059 aa0.89□□□□□ -2.27
HMGB1P45-201ENST00000435986 LRP1Q07954 4544 aaKnown RBP0.88□□□□□ -2.27
HMGB1P45-201ENST00000435986 A8MTW9 85 aa0.88□□□□□ -2.27
HMGB1P45-201ENST00000435986 SMR3BP02814 79 aaPredicted RBP0.88□□□□□ -2.27
HMGB1P45-201ENST00000435986 RPL39LQ96EH5 51 aaKnown RBP0.88□□□□□ -2.27
HMGB1P45-201ENST00000435986 DNAH11Q96DT5 4516 aa0.88□□□□□ -2.27
HMGB1P45-201ENST00000435986 DNAH5Q8TE73 4624 aa0.88□□□□□ -2.27
HMGB1P45-201ENST00000435986 DNAH6Q9C0G6 4158 aa0.88□□□□□ -2.27
HMGB1P45-201ENST00000435986 LRP2P98164 4655 aa0.88□□□□□ -2.27
HMGB1P45-201ENST00000435986 DEFB4AO15263 64 aa0.87□□□□□ -2.27
HMGB1P45-201ENST00000435986 LEAP2Q969E1 77 aa0.87□□□□□ -2.27
HMGB1P45-201ENST00000435986 FAT3Q8TDW7 4589 aa0.87□□□□□ -2.27
HMGB1P45-201ENST00000435986 FAT1Q14517 4588 aa0.86□□□□□ -2.27
HMGB1P45-201ENST00000435986 CLPSL2Q6UWE3 100 aa0.86□□□□□ -2.27
HMGB1P45-201ENST00000435986 ARHGAP5-AS1Q96IT6 56 aa0.86□□□□□ -2.27
HMGB1P45-201ENST00000435986 LRP1BQ9NZR2 4599 aa0.86□□□□□ -2.27
HMGB1P45-201ENST00000435986 MUC2Q02817 5179 aa0.85□□□□□ -2.27
HMGB1P45-201ENST00000435986 LPAP08519 4548 aa0.85□□□□□ -2.27
HMGB1P45-201ENST00000435986 FAT4Q6V0I7 4981 aa0.84□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 107.5 ms