RNA–Protein interactions for RNA: ENST00000435953.2

AC004448.3-201, humanhuman

TSL 2 BASIC

Gene AC004448.3, Length 543 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004448.3-201ENST00000435953 LCE2AQ5TA79 106 aaPredicted RBP4.86□□□□□ -1.63
AC004448.3-201ENST00000435953 MT1HP80294 61 aa4.84□□□□□ -1.63
AC004448.3-201ENST00000435953 S4R3F8 94 aa4.83□□□□□ -1.64
AC004448.3-201ENST00000435953 TMEM258P61165 79 aa4.82□□□□□ -1.64
AC004448.3-201ENST00000435953 LCA10Q71F78 164 aa4.81□□□□□ -1.64
AC004448.3-201ENST00000435953 ATP5EP56381 51 aaPredicted RBP4.8□□□□□ -1.64
AC004448.3-201ENST00000435953 LORP23490 312 aaPredicted RBP4.79□□□□□ -1.64
AC004448.3-201ENST00000435953 M0R2T5 61 aa4.78□□□□□ -1.64
AC004448.3-201ENST00000435953 CSAG1Q6PB30 78 aa4.77□□□□□ -1.65
AC004448.3-201ENST00000435953 CHKB-CPT1BH3BT56 60 aa4.76□□□□□ -1.65
AC004448.3-201ENST00000435953 COA5Q86WW8 74 aa4.76□□□□□ -1.65
AC004448.3-201ENST00000435953 SPTSSBQ8NFR3 76 aa4.72□□□□□ -1.65
AC004448.3-201ENST00000435953 KRTAP10-6P60371 365 aaPredicted RBP4.69□□□□□ -1.66
AC004448.3-201ENST00000435953 SERP1Q9Y6X1 66 aa4.68□□□□□ -1.66
AC004448.3-201ENST00000435953 KRTAP9-8Q9BYQ0 159 aa4.66□□□□□ -1.66
AC004448.3-201ENST00000435953 H0YAA0 97 aa4.63□□□□□ -1.67
AC004448.3-201ENST00000435953 RPS28P62857 69 aaKnown RBP4.63□□□□□ -1.67
AC004448.3-201ENST00000435953 MT2AP02795 61 aa4.61□□□□□ -1.67
AC004448.3-201ENST00000435953 SVIPQ8NHG7 77 aa4.61□□□□□ -1.67
AC004448.3-201ENST00000435953 ADM2Q7Z4H4 148 aa4.6□□□□□ -1.67
AC004448.3-201ENST00000435953 KRTAP10-10P60014 251 aa4.58□□□□□ -1.68
AC004448.3-201ENST00000435953 MT1FP04733 61 aa4.57□□□□□ -1.68
AC004448.3-201ENST00000435953 H3BS24 57 aa4.56□□□□□ -1.68
AC004448.3-201ENST00000435953 SMIM26A0A096LP01 95 aa4.55□□□□□ -1.68
AC004448.3-201ENST00000435953 P0C880 135 aa4.55□□□□□ -1.68
AC004448.3-201ENST00000435953 SEC61GP60059 68 aa4.55□□□□□ -1.68
AC004448.3-201ENST00000435953 LINC01558Q9Y6Z2 57 aa4.54□□□□□ -1.68
AC004448.3-201ENST00000435953 A0A1B0GU69 56 aa4.51□□□□□ -1.69
AC004448.3-201ENST00000435953 CRIPTQ9P021 101 aa4.51□□□□□ -1.69
AC004448.3-201ENST00000435953 Q1T7F1 81 aa4.5□□□□□ -1.69
AC004448.3-201ENST00000435953 KRTAP9-3Q9BYQ3 159 aa4.5□□□□□ -1.69
AC004448.3-201ENST00000435953 V9GYY9 64 aa4.5□□□□□ -1.69
AC004448.3-201ENST00000435953 PRR15LQ9BU68 103 aa4.48□□□□□ -1.69
AC004448.3-201ENST00000435953 KRTAP9-2Q9BYQ4 174 aa4.48□□□□□ -1.69
AC004448.3-201ENST00000435953 A0A1B0GU33 70 aa4.45□□□□□ -1.7
AC004448.3-201ENST00000435953 KRTAP9-6A0A140TA67 174 aa4.44□□□□□ -1.7
AC004448.3-201ENST00000435953 KRTAP19-1Q8IUB9 90 aa4.44□□□□□ -1.7
AC004448.3-201ENST00000435953 SPRR2GQ9BYE4 73 aa4.44□□□□□ -1.7
AC004448.3-201ENST00000435953 R4GN34 69 aa4.44□□□□□ -1.7
AC004448.3-201ENST00000435953 M0QZ58 72 aa4.43□□□□□ -1.7
AC004448.3-201ENST00000435953 PSPHP1O15172 72 aa4.41□□□□□ -1.7
AC004448.3-201ENST00000435953 KRTAP13-4Q3LI77 160 aa4.39□□□□□ -1.71
AC004448.3-201ENST00000435953 USH2AO75445 5202 aa4.39□□□□□ -1.71
AC004448.3-201ENST00000435953 Q5VV11 94 aa4.38□□□□□ -1.71
AC004448.3-201ENST00000435953 SPATA8Q6RVD6 105 aa4.37□□□□□ -1.71
AC004448.3-201ENST00000435953 KRTAP19-8Q3LI54 63 aa4.36□□□□□ -1.71
AC004448.3-201ENST00000435953 UQCR11O14957 56 aa4.35□□□□□ -1.71
AC004448.3-201ENST00000435953 LINC01554Q52M75 96 aa4.34□□□□□ -1.71
AC004448.3-201ENST00000435953 A0A0D9SG42 100 aa4.3□□□□□ -1.72
AC004448.3-201ENST00000435953 MT1BP07438 61 aa4.3□□□□□ -1.72
AC004448.3-201ENST00000435953 MIR22HGQ0VDD5 57 aa4.29□□□□□ -1.72
AC004448.3-201ENST00000435953 A6NED7 52 aa4.28□□□□□ -1.72
AC004448.3-201ENST00000435953 A6NN06 94 aa4.28□□□□□ -1.72
AC004448.3-201ENST00000435953 A8MU10 97 aa4.28□□□□□ -1.72
AC004448.3-201ENST00000435953 PLAC4Q8WY50 150 aa4.27□□□□□ -1.73
AC004448.3-201ENST00000435953 SSPOA2VEC9 5147 aa4.25□□□□□ -1.73
AC004448.3-201ENST00000435953 KRTAP12-1P59990 96 aa4.23□□□□□ -1.73
AC004448.3-201ENST00000435953 SPINT4Q6UDR6 99 aa4.22□□□□□ -1.73
AC004448.3-201ENST00000435953 KRTAP12-2P59991 146 aa4.2□□□□□ -1.74
AC004448.3-201ENST00000435953 FSIP2Q5CZC0 6907 aa4.2□□□□□ -1.74
AC004448.3-201ENST00000435953 CDC42SE1Q9NRR8 79 aa4.18□□□□□ -1.74
AC004448.3-201ENST00000435953 KRTAP19-6Q3LI70 58 aa4.17□□□□□ -1.74
AC004448.3-201ENST00000435953 CRCT1Q9UGL9 99 aa4.17□□□□□ -1.74
AC004448.3-201ENST00000435953 CAMK2N1Q7Z7J9 78 aa4.15□□□□□ -1.75
AC004448.3-201ENST00000435953 K7ERS5 55 aa4.13□□□□□ -1.75
AC004448.3-201ENST00000435953 KRTAP10-5P60370 271 aa4.12□□□□□ -1.75
AC004448.3-201ENST00000435953 MT1XP80297 61 aa4.12□□□□□ -1.75
AC004448.3-201ENST00000435953 FCGBPQ9Y6R7 5405 aaPredicted RBP4.11□□□□□ -1.75
AC004448.3-201ENST00000435953 PRO2289Q9P1D8 64 aa4.1□□□□□ -1.75
AC004448.3-201ENST00000435953 BRK1Q8WUW1 75 aa4.09□□□□□ -1.75
AC004448.3-201ENST00000435953 C10orf95Q9H7T3 257 aa4.02□□□□□ -1.77
AC004448.3-201ENST00000435953 KRTAP9-7A8MTY7 169 aa3.95□□□□□ -1.78
AC004448.3-201ENST00000435953 KRTAP10-7P60409 375 aaPredicted RBP3.94□□□□□ -1.78
AC004448.3-201ENST00000435953 ROMO1P60602 79 aa3.93□□□□□ -1.78
AC004448.3-201ENST00000435953 TNP1P09430 55 aa3.92□□□□□ -1.78
AC004448.3-201ENST00000435953 KRTAP10-12P60413 245 aa3.92□□□□□ -1.78
AC004448.3-201ENST00000435953 PRO0628Q9UI54 55 aa3.92□□□□□ -1.78
AC004448.3-201ENST00000435953 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.9□□□□□ -1.79
AC004448.3-201ENST00000435953 PMAIP1Q13794 54 aa3.89□□□□□ -1.79
AC004448.3-201ENST00000435953 KRTAP25-1Q3LHN0 102 aa3.88□□□□□ -1.79
AC004448.3-201ENST00000435953 LOC100996750A0A140TA64 210 aa3.87□□□□□ -1.79
AC004448.3-201ENST00000435953 KRTAP4-6Q9BYQ5 205 aa3.87□□□□□ -1.79
AC004448.3-201ENST00000435953 KRTAP19-4Q3LI73 84 aa3.86□□□□□ -1.79
AC004448.3-201ENST00000435953 KMT2DO14686 5537 aa3.84□□□□□ -1.79
AC004448.3-201ENST00000435953 KRTAP4-8A0A0G2JLE6 195 aa3.84□□□□□ -1.79
AC004448.3-201ENST00000435953 KRTAP4-8Q9BYQ9 185 aa3.84□□□□□ -1.79
AC004448.3-201ENST00000435953 MACF1Q9UPN3 7388 aaKnown RBP3.79□□□□□ -1.8
AC004448.3-201ENST00000435953 KRTAP8-1Q8IUC2 63 aa3.78□□□□□ -1.8
AC004448.3-201ENST00000435953 KRTAP23-1A1A580 65 aa3.77□□□□□ -1.81
AC004448.3-201ENST00000435953 LCE3AQ5TA76 89 aa3.77□□□□□ -1.81
AC004448.3-201ENST00000435953 KRTAP6-3Q3LI67 103 aa3.73□□□□□ -1.81
AC004448.3-201ENST00000435953 PP632Q6XCG6 107 aa3.71□□□□□ -1.82
AC004448.3-201ENST00000435953 SYNE2Q8WXH0 6885 aaKnown RBP3.7□□□□□ -1.82
AC004448.3-201ENST00000435953 KRTAP5-9P26371 169 aa3.69□□□□□ -1.82
AC004448.3-201ENST00000435953 KRTAP19-5Q3LI72 72 aa3.69□□□□□ -1.82
AC004448.3-201ENST00000435953 KRTAP19-7Q3SYF9 63 aa3.68□□□□□ -1.82
AC004448.3-201ENST00000435953 SPRR2FQ96RM1 72 aa3.67□□□□□ -1.82
AC004448.3-201ENST00000435953 KRTAP4-12Q9BQ66 201 aa3.65□□□□□ -1.83
AC004448.3-201ENST00000435953 MUC12Q9UKN1 5478 aa3.65□□□□□ -1.83
AC004448.3-201ENST00000435953 KRTAP12-3P60328 96 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms