RNA–Protein interactions for RNA: ENST00000435525.1

CTDSPL-204, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 371 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-204ENST00000435525 SPANXA2-OT1Q8N9U9 137 aa7.97□□□□□ -1.13
CTDSPL-204ENST00000435525 CHKB-CPT1BH3BT56 60 aa7.86□□□□□ -1.15
CTDSPL-204ENST00000435525 SPTSSBQ8NFR3 76 aa7.86□□□□□ -1.15
CTDSPL-204ENST00000435525 KRTAP9-8Q9BYQ0 159 aa7.85□□□□□ -1.15
CTDSPL-204ENST00000435525 KRTAP3-3Q9BYR6 98 aa7.84□□□□□ -1.15
CTDSPL-204ENST00000435525 CCDC179H3BU77 68 aa7.83□□□□□ -1.16
CTDSPL-204ENST00000435525 H7BZZ5 65 aa7.83□□□□□ -1.16
CTDSPL-204ENST00000435525 KRTAP10-10P60014 251 aa7.83□□□□□ -1.16
CTDSPL-204ENST00000435525 MT2AP02795 61 aa7.82□□□□□ -1.16
CTDSPL-204ENST00000435525 CYSTM1Q9H1C7 97 aa7.76□□□□□ -1.17
CTDSPL-204ENST00000435525 MT1FP04733 61 aa7.74□□□□□ -1.17
CTDSPL-204ENST00000435525 LCE2DQ5TA82 110 aaPredicted RBP7.74□□□□□ -1.17
CTDSPL-204ENST00000435525 ATP5EP56381 51 aaPredicted RBP7.73□□□□□ -1.17
CTDSPL-204ENST00000435525 H0YAA0 97 aa7.72□□□□□ -1.17
CTDSPL-204ENST00000435525 COA5Q86WW8 74 aa7.7□□□□□ -1.18
CTDSPL-204ENST00000435525 KRTAP9-2Q9BYQ4 174 aa7.66□□□□□ -1.18
CTDSPL-204ENST00000435525 TMEM258P61165 79 aa7.65□□□□□ -1.18
CTDSPL-204ENST00000435525 ADM2Q7Z4H4 148 aa7.65□□□□□ -1.18
CTDSPL-204ENST00000435525 CRIPTQ9P021 101 aa7.62□□□□□ -1.19
CTDSPL-204ENST00000435525 KRTAP9-3Q9BYQ3 159 aa7.6□□□□□ -1.19
CTDSPL-204ENST00000435525 PCP4P48539 62 aa7.53□□□□□ -1.2
CTDSPL-204ENST00000435525 SEC61GP60059 68 aa7.53□□□□□ -1.2
CTDSPL-204ENST00000435525 SERP1Q9Y6X1 66 aa7.48□□□□□ -1.21
CTDSPL-204ENST00000435525 R4GN34 69 aa7.47□□□□□ -1.21
CTDSPL-204ENST00000435525 P0C880 135 aa7.46□□□□□ -1.22
CTDSPL-204ENST00000435525 SPRR2GQ9BYE4 73 aa7.46□□□□□ -1.22
CTDSPL-204ENST00000435525 KRTAP3-2Q9BYR7 98 aa7.45□□□□□ -1.22
CTDSPL-204ENST00000435525 LCE2BO14633 110 aa7.44□□□□□ -1.22
CTDSPL-204ENST00000435525 KRTAP19-1Q8IUB9 90 aa7.42□□□□□ -1.22
CTDSPL-204ENST00000435525 M0QZ58 72 aa7.4□□□□□ -1.22
CTDSPL-204ENST00000435525 Q5VV11 94 aa7.37□□□□□ -1.23
CTDSPL-204ENST00000435525 A0A1B0GU69 56 aa7.35□□□□□ -1.23
CTDSPL-204ENST00000435525 CRCT1Q9UGL9 99 aa7.35□□□□□ -1.23
CTDSPL-204ENST00000435525 PRR15LQ9BU68 103 aa7.34□□□□□ -1.23
CTDSPL-204ENST00000435525 KRTAP19-8Q3LI54 63 aa7.33□□□□□ -1.24
CTDSPL-204ENST00000435525 KRTAP9-6A0A140TA67 174 aa7.28□□□□□ -1.24
CTDSPL-204ENST00000435525 LINC01554Q52M75 96 aa7.28□□□□□ -1.24
CTDSPL-204ENST00000435525 A0A1B0GU33 70 aa7.26□□□□□ -1.25
CTDSPL-204ENST00000435525 LINC01558Q9Y6Z2 57 aa7.25□□□□□ -1.25
CTDSPL-204ENST00000435525 PLAC4Q8WY50 150 aa7.24□□□□□ -1.25
CTDSPL-204ENST00000435525 MT1BP07438 61 aa7.22□□□□□ -1.25
CTDSPL-204ENST00000435525 V9GYY9 64 aa7.22□□□□□ -1.25
CTDSPL-204ENST00000435525 USH2AO75445 5202 aa7.19□□□□□ -1.26
CTDSPL-204ENST00000435525 FSIP2Q5CZC0 6907 aa7.16□□□□□ -1.26
CTDSPL-204ENST00000435525 SMIM26A0A096LP01 95 aa7.16□□□□□ -1.26
CTDSPL-204ENST00000435525 RPS28P62857 69 aaKnown RBP7.16□□□□□ -1.26
CTDSPL-204ENST00000435525 KRTAP19-6Q3LI70 58 aa7.16□□□□□ -1.26
CTDSPL-204ENST00000435525 A6NN06 94 aa7.13□□□□□ -1.27
CTDSPL-204ENST00000435525 KRTAP13-4Q3LI77 160 aa7.11□□□□□ -1.27
CTDSPL-204ENST00000435525 Q1T7F1 81 aa7.1□□□□□ -1.27
CTDSPL-204ENST00000435525 SPATA8Q6RVD6 105 aa7.09□□□□□ -1.27
CTDSPL-204ENST00000435525 PRO2289Q9P1D8 64 aa7.07□□□□□ -1.28
CTDSPL-204ENST00000435525 A0A0D9SG42 100 aa7.06□□□□□ -1.28
CTDSPL-204ENST00000435525 UQCR11O14957 56 aa7.05□□□□□ -1.28
CTDSPL-204ENST00000435525 KRTAP10-5P60370 271 aa7.01□□□□□ -1.29
CTDSPL-204ENST00000435525 SSPOA2VEC9 5147 aa7□□□□□ -1.29
CTDSPL-204ENST00000435525 PSPHP1O15172 72 aa7□□□□□ -1.29
CTDSPL-204ENST00000435525 CAMK2N1Q7Z7J9 78 aa6.97□□□□□ -1.29
CTDSPL-204ENST00000435525 SPINT4Q6UDR6 99 aa6.96□□□□□ -1.3
CTDSPL-204ENST00000435525 MIR22HGQ0VDD5 57 aa6.91□□□□□ -1.3
CTDSPL-204ENST00000435525 A8MU10 97 aa6.9□□□□□ -1.3
CTDSPL-204ENST00000435525 MT1XP80297 61 aa6.88□□□□□ -1.31
CTDSPL-204ENST00000435525 KRTAP12-1P59990 96 aa6.87□□□□□ -1.31
CTDSPL-204ENST00000435525 FCGBPQ9Y6R7 5405 aaPredicted RBP6.86□□□□□ -1.31
CTDSPL-204ENST00000435525 A6NED7 52 aa6.85□□□□□ -1.31
CTDSPL-204ENST00000435525 K7ERS5 55 aa6.82□□□□□ -1.32
CTDSPL-204ENST00000435525 KRTAP12-2P59991 146 aa6.82□□□□□ -1.32
CTDSPL-204ENST00000435525 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.79□□□□□ -1.32
CTDSPL-204ENST00000435525 CDC42SE1Q9NRR8 79 aa6.62□□□□□ -1.35
CTDSPL-204ENST00000435525 KRTAP9-7A8MTY7 169 aa6.6□□□□□ -1.35
CTDSPL-204ENST00000435525 KRTAP10-7P60409 375 aaPredicted RBP6.57□□□□□ -1.36
CTDSPL-204ENST00000435525 KRTAP10-12P60413 245 aa6.57□□□□□ -1.36
CTDSPL-204ENST00000435525 KRTAP6-3Q3LI67 103 aa6.54□□□□□ -1.36
CTDSPL-204ENST00000435525 MACF1Q9UPN3 7388 aaKnown RBP6.53□□□□□ -1.36
CTDSPL-204ENST00000435525 TNP1P09430 55 aa6.53□□□□□ -1.36
CTDSPL-204ENST00000435525 C10orf95Q9H7T3 257 aa6.51□□□□□ -1.37
CTDSPL-204ENST00000435525 KRTAP8-1Q8IUC2 63 aa6.5□□□□□ -1.37
CTDSPL-204ENST00000435525 KRTAP4-8A0A0G2JLE6 195 aa6.41□□□□□ -1.38
CTDSPL-204ENST00000435525 KRTAP4-8Q9BYQ9 185 aa6.41□□□□□ -1.38
CTDSPL-204ENST00000435525 BRK1Q8WUW1 75 aa6.4□□□□□ -1.38
CTDSPL-204ENST00000435525 KRTAP25-1Q3LHN0 102 aa6.39□□□□□ -1.39
CTDSPL-204ENST00000435525 KRTAP5-9P26371 169 aa6.38□□□□□ -1.39
CTDSPL-204ENST00000435525 SPRR2FQ96RM1 72 aa6.35□□□□□ -1.39
CTDSPL-204ENST00000435525 SYNE2Q8WXH0 6885 aaKnown RBP6.35□□□□□ -1.39
CTDSPL-204ENST00000435525 ROMO1P60602 79 aa6.33□□□□□ -1.4
CTDSPL-204ENST00000435525 LCE3AQ5TA76 89 aa6.23□□□□□ -1.41
CTDSPL-204ENST00000435525 KMT2DO14686 5537 aa6.21□□□□□ -1.42
CTDSPL-204ENST00000435525 KRTAP23-1A1A580 65 aa6.16□□□□□ -1.42
CTDSPL-204ENST00000435525 SPRR2EP22531 72 aa6.16□□□□□ -1.42
CTDSPL-204ENST00000435525 SPRR2BP35325 72 aa6.16□□□□□ -1.42
CTDSPL-204ENST00000435525 SPRR2AP35326 72 aa6.16□□□□□ -1.42
CTDSPL-204ENST00000435525 KRTAP19-5Q3LI72 72 aa6.14□□□□□ -1.43
CTDSPL-204ENST00000435525 KRTAP19-7Q3SYF9 63 aa6.13□□□□□ -1.43
CTDSPL-204ENST00000435525 MT1EP04732 61 aa6.09□□□□□ -1.43
CTDSPL-204ENST00000435525 PP632Q6XCG6 107 aa6.09□□□□□ -1.43
CTDSPL-204ENST00000435525 LCE1AQ5T7P2 110 aa6.08□□□□□ -1.44
CTDSPL-204ENST00000435525 PMAIP1Q13794 54 aa6.06□□□□□ -1.44
CTDSPL-204ENST00000435525 KRTAP12-3P60328 96 aa6.04□□□□□ -1.44
CTDSPL-204ENST00000435525 PRO0628Q9UI54 55 aa6.01□□□□□ -1.45
CTDSPL-204ENST00000435525 MUC12Q9UKN1 5478 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms