RNA–Protein interactions for RNA: ENST00000434411.5

SNHG20-202, Transcript of small nucleolar RNA host gene 20, humanhuman

TSL 1 (best) BASIC

Gene SNHG20, Length 2,143 nt, Biotype sense overlapping, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG20-202ENST00000434411 Q5W150 140 aa6.98□□□□□ -1.29
SNHG20-202ENST00000434411 A0A1B0GU69 56 aa6.97□□□□□ -1.29
SNHG20-202ENST00000434411 PCOTHQ58A44 107 aa6.96□□□□□ -1.3
SNHG20-202ENST00000434411 MRPL34Q9BQ48 92 aaKnown RBP6.94□□□□□ -1.3
SNHG20-202ENST00000434411 SPINK6Q6UWN8 80 aa6.92□□□□□ -1.3
SNHG20-202ENST00000434411 PKHD1L1Q86WI1 4243 aa6.92□□□□□ -1.3
SNHG20-202ENST00000434411 HERC1Q15751 4861 aa6.91□□□□□ -1.3
SNHG20-202ENST00000434411 SPINT4Q6UDR6 99 aa6.91□□□□□ -1.3
SNHG20-202ENST00000434411 KRTAP13-2Q52LG2 175 aa6.89□□□□□ -1.31
SNHG20-202ENST00000434411 LRP1Q07954 4544 aaKnown RBP6.87□□□□□ -1.31
SNHG20-202ENST00000434411 MT1HL1P0DM35 61 aa6.87□□□□□ -1.31
SNHG20-202ENST00000434411 KRTAP1-4P0C5Y4 121 aa6.86□□□□□ -1.31
SNHG20-202ENST00000434411 LINC00304Q8N9R0 145 aa6.86□□□□□ -1.31
SNHG20-202ENST00000434411 TYMSOSQ8TAI1 123 aa6.86□□□□□ -1.31
SNHG20-202ENST00000434411 FAT3Q8TDW7 4589 aa6.85□□□□□ -1.31
SNHG20-202ENST00000434411 SPINK1P00995 79 aa6.83□□□□□ -1.32
SNHG20-202ENST00000434411 KRTAP10-8P60410 259 aa6.8□□□□□ -1.32
SNHG20-202ENST00000434411 RPS29P62273 56 aaKnown RBP6.79□□□□□ -1.32
SNHG20-202ENST00000434411 LCE2CQ5TA81 110 aa6.79□□□□□ -1.32
SNHG20-202ENST00000434411 KRTAP13-3Q3SY46 172 aa6.79□□□□□ -1.32
SNHG20-202ENST00000434411 LCE2AQ5TA79 106 aaPredicted RBP6.77□□□□□ -1.33
SNHG20-202ENST00000434411 CRIPTQ9P021 101 aa6.73□□□□□ -1.33
SNHG20-202ENST00000434411 ACYP2P14621 99 aa6.73□□□□□ -1.33
SNHG20-202ENST00000434411 TNXBP22105 4242 aa6.71□□□□□ -1.33
SNHG20-202ENST00000434411 LCE2BO14633 110 aa6.7□□□□□ -1.34
SNHG20-202ENST00000434411 CAMK2N1Q7Z7J9 78 aa6.68□□□□□ -1.34
SNHG20-202ENST00000434411 HMCN2Q8NDA2 5059 aa6.67□□□□□ -1.34
SNHG20-202ENST00000434411 IGKV2-30P06310 120 aa6.65□□□□□ -1.34
SNHG20-202ENST00000434411 KRTAP23-1A1A580 65 aa6.64□□□□□ -1.35
SNHG20-202ENST00000434411 IGKV2D-30A0A075B6S6 120 aa6.59□□□□□ -1.35
SNHG20-202ENST00000434411 TPRXLQ17RH7 258 aa6.56□□□□□ -1.36
SNHG20-202ENST00000434411 H0YAA0 97 aa6.55□□□□□ -1.36
SNHG20-202ENST00000434411 UBR4Q5T4S7 5183 aa6.55□□□□□ -1.36
SNHG20-202ENST00000434411 LRP2P98164 4655 aa6.49□□□□□ -1.37
SNHG20-202ENST00000434411 C9orf92A6NGG3 77 aa6.49□□□□□ -1.37
SNHG20-202ENST00000434411 A0A1B0GU33 70 aa6.46□□□□□ -1.37
SNHG20-202ENST00000434411 LPAP08519 4548 aa6.42□□□□□ -1.38
SNHG20-202ENST00000434411 LORP23490 312 aaPredicted RBP6.38□□□□□ -1.39
SNHG20-202ENST00000434411 RNF213Q63HN8 5207 aa6.37□□□□□ -1.39
SNHG20-202ENST00000434411 C10orf95Q9H7T3 257 aa6.33□□□□□ -1.4
SNHG20-202ENST00000434411 RPL37P61927 97 aaKnown RBP6.28□□□□□ -1.4
SNHG20-202ENST00000434411 KRTAP3-1Q9BYR8 98 aa6.26□□□□□ -1.41
SNHG20-202ENST00000434411 PRO2289Q9P1D8 64 aa6.25□□□□□ -1.41
SNHG20-202ENST00000434411 XP32Q5T750 250 aa6.24□□□□□ -1.41
SNHG20-202ENST00000434411 COX6B2Q6YFQ2 88 aa6.23□□□□□ -1.41
SNHG20-202ENST00000434411 H1FX-AS1Q4G0G2 97 aa6.22□□□□□ -1.41
SNHG20-202ENST00000434411 MUC2Q02817 5179 aa6.19□□□□□ -1.42
SNHG20-202ENST00000434411 MUC17Q685J3 4493 aa6.14□□□□□ -1.43
SNHG20-202ENST00000434411 R4GN34 69 aa6.12□□□□□ -1.43
SNHG20-202ENST00000434411 PLAC4Q8WY50 150 aa6.07□□□□□ -1.44
SNHG20-202ENST00000434411 KRTAP4-1Q9BYQ7 146 aa6.06□□□□□ -1.44
SNHG20-202ENST00000434411 S4R3F8 94 aa6.05□□□□□ -1.44
SNHG20-202ENST00000434411 FAT4Q6V0I7 4981 aa6.01□□□□□ -1.45
SNHG20-202ENST00000434411 KRTAP10-6P60371 365 aaPredicted RBP5.95□□□□□ -1.46
SNHG20-202ENST00000434411 KRTAP9-2Q9BYQ4 174 aa5.91□□□□□ -1.46
SNHG20-202ENST00000434411 KRTAP13-4Q3LI77 160 aa5.9□□□□□ -1.47
SNHG20-202ENST00000434411 A0A0D9SG42 100 aa5.88□□□□□ -1.47
SNHG20-202ENST00000434411 KRTAP19-2Q3LHN2 52 aa5.88□□□□□ -1.47
SNHG20-202ENST00000434411 MT1HP80294 61 aa5.84□□□□□ -1.47
SNHG20-202ENST00000434411 M0R2T5 61 aa5.8□□□□□ -1.48
SNHG20-202ENST00000434411 INE1O15225 51 aa5.8□□□□□ -1.48
SNHG20-202ENST00000434411 M0QZ58 72 aa5.71□□□□□ -1.5
SNHG20-202ENST00000434411 KRTAP12-2P59991 146 aa5.71□□□□□ -1.5
SNHG20-202ENST00000434411 KRTAP9-6A0A140TA67 174 aa5.71□□□□□ -1.5
SNHG20-202ENST00000434411 KRTAP12-1P59990 96 aa5.67□□□□□ -1.5
SNHG20-202ENST00000434411 FLGP20930 4061 aaPredicted RBP5.67□□□□□ -1.5
SNHG20-202ENST00000434411 CRCT1Q9UGL9 99 aa5.6□□□□□ -1.51
SNHG20-202ENST00000434411 FSIP2Q5CZC0 6907 aa5.55□□□□□ -1.52
SNHG20-202ENST00000434411 KRTAP9-8Q9BYQ0 159 aa5.53□□□□□ -1.52
SNHG20-202ENST00000434411 SPRR5A0A1B0GTR4 108 aa5.5□□□□□ -1.53
SNHG20-202ENST00000434411 MT2AP02795 61 aa5.45□□□□□ -1.54
SNHG20-202ENST00000434411 KRTAP10-10P60014 251 aa5.42□□□□□ -1.54
SNHG20-202ENST00000434411 MT1FP04733 61 aa5.4□□□□□ -1.54
SNHG20-202ENST00000434411 KRTAP9-3Q9BYQ3 159 aa5.35□□□□□ -1.55
SNHG20-202ENST00000434411 PP632Q6XCG6 107 aa5.34□□□□□ -1.55
SNHG20-202ENST00000434411 USH2AO75445 5202 aa5.28□□□□□ -1.56
SNHG20-202ENST00000434411 KRTAP19-1Q8IUB9 90 aa5.23□□□□□ -1.57
SNHG20-202ENST00000434411 SSPOA2VEC9 5147 aa5.21□□□□□ -1.58
SNHG20-202ENST00000434411 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.2□□□□□ -1.58
SNHG20-202ENST00000434411 SPRR2GQ9BYE4 73 aa5.19□□□□□ -1.58
SNHG20-202ENST00000434411 KRTAP19-6Q3LI70 58 aa5.15□□□□□ -1.59
SNHG20-202ENST00000434411 KRTAP9-7A8MTY7 169 aa5.14□□□□□ -1.59
SNHG20-202ENST00000434411 FCGBPQ9Y6R7 5405 aaPredicted RBP5.12□□□□□ -1.59
SNHG20-202ENST00000434411 TNP1P09430 55 aa5.09□□□□□ -1.59
SNHG20-202ENST00000434411 MACF1Q9UPN3 7388 aaKnown RBP5.02□□□□□ -1.61
SNHG20-202ENST00000434411 KRTAP19-8Q3LI54 63 aa4.99□□□□□ -1.61
SNHG20-202ENST00000434411 MT1BP07438 61 aa4.97□□□□□ -1.61
SNHG20-202ENST00000434411 KRTAP19-4Q3LI73 84 aa4.95□□□□□ -1.62
SNHG20-202ENST00000434411 SYNE2Q8WXH0 6885 aaKnown RBP4.95□□□□□ -1.62
SNHG20-202ENST00000434411 KRTAP6-3Q3LI67 103 aa4.88□□□□□ -1.63
SNHG20-202ENST00000434411 KRTAP10-5P60370 271 aa4.87□□□□□ -1.63
SNHG20-202ENST00000434411 LCE5AQ5TCM9 118 aa4.84□□□□□ -1.64
SNHG20-202ENST00000434411 KRTAP9-4Q9BYQ2 154 aa4.8□□□□□ -1.64
SNHG20-202ENST00000434411 LCE3AQ5TA76 89 aa4.79□□□□□ -1.64
SNHG20-202ENST00000434411 MT1XP80297 61 aa4.78□□□□□ -1.64
SNHG20-202ENST00000434411 KRTAP10-12P60413 245 aa4.71□□□□□ -1.66
SNHG20-202ENST00000434411 KRTAP2-2Q9BYT5 123 aa4.67□□□□□ -1.66
SNHG20-202ENST00000434411 KRTAP8-1Q8IUC2 63 aa4.67□□□□□ -1.66
SNHG20-202ENST00000434411 KRTAP5-9P26371 169 aa4.66□□□□□ -1.66
SNHG20-202ENST00000434411 KRTAP9-9Q9BYP9 154 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms