RNA–Protein interactions for RNA: ENST00000434316.6

TMCO3-202, Transcript of transmembrane and coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMCO3, Length 3,050 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO3-202ENST00000434316 ROMO1P60602 79 aa7.69□□□□□ -1.18
TMCO3-202ENST00000434316 A0A0D9SG42 100 aa7.68□□□□□ -1.18
TMCO3-202ENST00000434316 LRP1Q07954 4544 aaKnown RBP7.67□□□□□ -1.18
TMCO3-202ENST00000434316 HSPG2P98160 4391 aa7.67□□□□□ -1.18
TMCO3-202ENST00000434316 KRTAP10-8P60410 259 aa7.65□□□□□ -1.18
TMCO3-202ENST00000434316 KRTAP3-2Q9BYR7 98 aa7.65□□□□□ -1.19
TMCO3-202ENST00000434316 RPL37P61927 97 aaKnown RBP7.64□□□□□ -1.19
TMCO3-202ENST00000434316 TNXBP22105 4242 aa7.62□□□□□ -1.19
TMCO3-202ENST00000434316 MYCBP2O75592 4640 aa7.59□□□□□ -1.19
TMCO3-202ENST00000434316 S4R3F8 94 aa7.58□□□□□ -1.2
TMCO3-202ENST00000434316 P0C880 135 aa7.57□□□□□ -1.2
TMCO3-202ENST00000434316 XP32Q5T750 250 aa7.55□□□□□ -1.2
TMCO3-202ENST00000434316 TPRXLQ17RH7 258 aa7.54□□□□□ -1.2
TMCO3-202ENST00000434316 RYR2Q92736 4967 aa7.54□□□□□ -1.2
TMCO3-202ENST00000434316 C10orf95Q9H7T3 257 aa7.51□□□□□ -1.21
TMCO3-202ENST00000434316 KRTAP12-2P59991 146 aa7.46□□□□□ -1.22
TMCO3-202ENST00000434316 KMT2CQ8NEZ4 4911 aaKnown RBP7.46□□□□□ -1.22
TMCO3-202ENST00000434316 Q5VSD8 79 aa7.44□□□□□ -1.22
TMCO3-202ENST00000434316 SPINT4Q6UDR6 99 aa7.41□□□□□ -1.22
TMCO3-202ENST00000434316 LPAP08519 4548 aa7.39□□□□□ -1.23
TMCO3-202ENST00000434316 KRTAP12-1P59990 96 aa7.37□□□□□ -1.23
TMCO3-202ENST00000434316 KRTAP17-1Q9BYP8 105 aa7.37□□□□□ -1.23
TMCO3-202ENST00000434316 KRTAP21-3Q3LHN1 58 aa7.31□□□□□ -1.24
TMCO3-202ENST00000434316 LRP2P98164 4655 aa7.29□□□□□ -1.24
TMCO3-202ENST00000434316 RYR1P21817 5038 aa7.29□□□□□ -1.24
TMCO3-202ENST00000434316 MT1HL1P0DM35 61 aa7.28□□□□□ -1.24
TMCO3-202ENST00000434316 KRTAP15-1Q3LI76 137 aa7.24□□□□□ -1.25
TMCO3-202ENST00000434316 M0QZ58 72 aa7.21□□□□□ -1.26
TMCO3-202ENST00000434316 KIAA1109Q2LD37 5005 aa7.2□□□□□ -1.26
TMCO3-202ENST00000434316 NDUFAF8A1L188 74 aa7.17□□□□□ -1.26
TMCO3-202ENST00000434316 RYR3Q15413 4870 aa7.17□□□□□ -1.26
TMCO3-202ENST00000434316 R4GN34 69 aa7.05□□□□□ -1.28
TMCO3-202ENST00000434316 ABCA13Q86UQ4 5058 aa7.03□□□□□ -1.28
TMCO3-202ENST00000434316 LORP23490 312 aaPredicted RBP7.02□□□□□ -1.29
TMCO3-202ENST00000434316 MUC17Q685J3 4493 aa6.93□□□□□ -1.3
TMCO3-202ENST00000434316 EPPK1P58107 5090 aaKnown RBP6.93□□□□□ -1.3
TMCO3-202ENST00000434316 KRTAP4-1Q9BYQ7 146 aa6.9□□□□□ -1.31
TMCO3-202ENST00000434316 KRTAP4-5Q9BYR2 181 aa6.9□□□□□ -1.31
TMCO3-202ENST00000434316 SEC61BP60468 96 aaKnown RBP6.84□□□□□ -1.31
TMCO3-202ENST00000434316 PLAC4Q8WY50 150 aa6.83□□□□□ -1.32
TMCO3-202ENST00000434316 LCE2DQ5TA82 110 aaPredicted RBP6.78□□□□□ -1.32
TMCO3-202ENST00000434316 KRTAP19-2Q3LHN2 52 aa6.75□□□□□ -1.33
TMCO3-202ENST00000434316 CAMK2N1Q7Z7J9 78 aa6.73□□□□□ -1.33
TMCO3-202ENST00000434316 PP632Q6XCG6 107 aa6.63□□□□□ -1.35
TMCO3-202ENST00000434316 MUC2Q02817 5179 aa6.62□□□□□ -1.35
TMCO3-202ENST00000434316 J3QL48 77 aa6.61□□□□□ -1.35
TMCO3-202ENST00000434316 FLGP20930 4061 aaPredicted RBP6.55□□□□□ -1.36
TMCO3-202ENST00000434316 HERC2O95714 4834 aa6.55□□□□□ -1.36
TMCO3-202ENST00000434316 LUZP6Q538Z0 58 aa6.53□□□□□ -1.36
TMCO3-202ENST00000434316 TNP1P09430 55 aa6.47□□□□□ -1.37
TMCO3-202ENST00000434316 HERC1Q15751 4861 aa6.44□□□□□ -1.38
TMCO3-202ENST00000434316 PCLOQ9Y6V0 5065 aa6.44□□□□□ -1.38
TMCO3-202ENST00000434316 BIRC6Q9NR09 4857 aa6.43□□□□□ -1.38
TMCO3-202ENST00000434316 KRTAP23-1A1A580 65 aa6.33□□□□□ -1.4
TMCO3-202ENST00000434316 SPRR5A0A1B0GTR4 108 aa6.3□□□□□ -1.4
TMCO3-202ENST00000434316 A0A0A0MQY5 61 aa6.3□□□□□ -1.4
TMCO3-202ENST00000434316 FAT4Q6V0I7 4981 aa6.3□□□□□ -1.4
TMCO3-202ENST00000434316 LCE2CQ5TA81 110 aa6.27□□□□□ -1.41
TMCO3-202ENST00000434316 KRTAP19-1Q8IUB9 90 aa6.25□□□□□ -1.41
TMCO3-202ENST00000434316 SPRR2GQ9BYE4 73 aa6.24□□□□□ -1.41
TMCO3-202ENST00000434316 HMCN2Q8NDA2 5059 aa6.2□□□□□ -1.42
TMCO3-202ENST00000434316 RNF213Q63HN8 5207 aa6.18□□□□□ -1.42
TMCO3-202ENST00000434316 LCE3AQ5TA76 89 aa6.17□□□□□ -1.42
TMCO3-202ENST00000434316 M0R2T5 61 aa6.14□□□□□ -1.43
TMCO3-202ENST00000434316 MT1HP80294 61 aa6.07□□□□□ -1.44
TMCO3-202ENST00000434316 MT1FP04733 61 aa6.07□□□□□ -1.44
TMCO3-202ENST00000434316 UBR4Q5T4S7 5183 aa6.06□□□□□ -1.44
TMCO3-202ENST00000434316 KRTAP10-10P60014 251 aa6.05□□□□□ -1.44
TMCO3-202ENST00000434316 MT2AP02795 61 aa6.04□□□□□ -1.44
TMCO3-202ENST00000434316 KRTAP9-8Q9BYQ0 159 aa5.97□□□□□ -1.45
TMCO3-202ENST00000434316 KRTAP8-1Q8IUC2 63 aa5.95□□□□□ -1.46
TMCO3-202ENST00000434316 KRTAP19-8Q3LI54 63 aa5.92□□□□□ -1.46
TMCO3-202ENST00000434316 KRTAP10-5P60370 271 aa5.91□□□□□ -1.46
TMCO3-202ENST00000434316 MT1XP80297 61 aa5.9□□□□□ -1.46
TMCO3-202ENST00000434316 MT1BP07438 61 aa5.9□□□□□ -1.47
TMCO3-202ENST00000434316 KRTAP12-3P60328 96 aa5.83□□□□□ -1.48
TMCO3-202ENST00000434316 KRTAP10-12P60413 245 aa5.82□□□□□ -1.48
TMCO3-202ENST00000434316 KRTAP10-7P60409 375 aaPredicted RBP5.79□□□□□ -1.48
TMCO3-202ENST00000434316 PRO2289Q9P1D8 64 aa5.71□□□□□ -1.49
TMCO3-202ENST00000434316 KRTAP9-3Q9BYQ3 159 aa5.7□□□□□ -1.5
TMCO3-202ENST00000434316 LCE2BO14633 110 aa5.64□□□□□ -1.51
TMCO3-202ENST00000434316 INE1O15225 51 aa5.64□□□□□ -1.51
TMCO3-202ENST00000434316 KRTAP19-5Q3LI72 72 aa5.56□□□□□ -1.52
TMCO3-202ENST00000434316 KMT2DO14686 5537 aa5.5□□□□□ -1.53
TMCO3-202ENST00000434316 USH2AO75445 5202 aa5.5□□□□□ -1.53
TMCO3-202ENST00000434316 LCE3CQ5T5A8 94 aa5.49□□□□□ -1.53
TMCO3-202ENST00000434316 KRTAP4-8A0A0G2JLE6 195 aa5.42□□□□□ -1.54
TMCO3-202ENST00000434316 KRTAP4-8Q9BYQ9 185 aa5.42□□□□□ -1.54
TMCO3-202ENST00000434316 KRTAP9-6A8MVA2 160 aa5.39□□□□□ -1.55
TMCO3-202ENST00000434316 FSIP2Q5CZC0 6907 aa5.38□□□□□ -1.55
TMCO3-202ENST00000434316 LCE2AQ5TA79 106 aaPredicted RBP5.34□□□□□ -1.55
TMCO3-202ENST00000434316 KRTAP4-7Q9BYR0 210 aa5.29□□□□□ -1.56
TMCO3-202ENST00000434316 KRTAP19-7Q3SYF9 63 aa5.26□□□□□ -1.57
TMCO3-202ENST00000434316 KRTAP2-3P0C7H8 128 aa5.18□□□□□ -1.58
TMCO3-202ENST00000434316 KRTAP2-4Q9BYR9 128 aa5.18□□□□□ -1.58
TMCO3-202ENST00000434316 KRTAP2-1Q9BYU5 128 aa5.18□□□□□ -1.58
TMCO3-202ENST00000434316 MT1LQ93083 61 aa5.11□□□□□ -1.59
TMCO3-202ENST00000434316 MT1EP04732 61 aa5.08□□□□□ -1.6
TMCO3-202ENST00000434316 SSPOA2VEC9 5147 aa4.97□□□□□ -1.61
TMCO3-202ENST00000434316 KRTAP19-4Q3LI73 84 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms