RNA–Protein interactions for RNA: ENST00000433257.5

DDX56-205, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-205ENST00000433257 K7ERS5 55 aa8.02□□□□□ -1.13
DDX56-205ENST00000433257 H1FX-AS1Q4G0G2 97 aa8□□□□□ -1.13
DDX56-205ENST00000433257 H0YAA0 97 aa7.98□□□□□ -1.13
DDX56-205ENST00000433257 PKHD1L1Q86WI1 4243 aa7.96□□□□□ -1.13
DDX56-205ENST00000433257 FLG2Q5D862 2391 aaPredicted RBP7.93□□□□□ -1.14
DDX56-205ENST00000433257 MYCBP2O75592 4640 aa7.92□□□□□ -1.14
DDX56-205ENST00000433257 J3QL48 77 aa7.91□□□□□ -1.14
DDX56-205ENST00000433257 KRTAP25-1Q3LHN0 102 aa7.91□□□□□ -1.14
DDX56-205ENST00000433257 COX6B2Q6YFQ2 88 aa7.91□□□□□ -1.14
DDX56-205ENST00000433257 KRTAP3-1Q9BYR8 98 aa7.88□□□□□ -1.15
DDX56-205ENST00000433257 LRP1Q07954 4544 aaKnown RBP7.86□□□□□ -1.15
DDX56-205ENST00000433257 C9orf92A6NGG3 77 aa7.86□□□□□ -1.15
DDX56-205ENST00000433257 FAT3Q8TDW7 4589 aa7.86□□□□□ -1.15
DDX56-205ENST00000433257 MT1HL1P0DM35 61 aa7.78□□□□□ -1.16
DDX56-205ENST00000433257 KRTAP10-8P60410 259 aa7.78□□□□□ -1.16
DDX56-205ENST00000433257 TNXBP22105 4242 aa7.77□□□□□ -1.17
DDX56-205ENST00000433257 DMBT1Q9UGM3 2413 aaPredicted RBP7.76□□□□□ -1.17
DDX56-205ENST00000433257 ROMO1P60602 79 aa7.73□□□□□ -1.17
DDX56-205ENST00000433257 RPL37P61927 97 aaKnown RBP7.71□□□□□ -1.18
DDX56-205ENST00000433257 HERC1Q15751 4861 aa7.7□□□□□ -1.18
DDX56-205ENST00000433257 H3BS24 57 aa7.62□□□□□ -1.19
DDX56-205ENST00000433257 S4R3F8 94 aa7.61□□□□□ -1.19
DDX56-205ENST00000433257 KRTAP10-6P60371 365 aaPredicted RBP7.59□□□□□ -1.19
DDX56-205ENST00000433257 KRTAP3-3Q9BYR6 98 aa7.56□□□□□ -1.2
DDX56-205ENST00000433257 KRTAP3-2Q9BYR7 98 aa7.51□□□□□ -1.21
DDX56-205ENST00000433257 HMCN2Q8NDA2 5059 aa7.49□□□□□ -1.21
DDX56-205ENST00000433257 XP32Q5T750 250 aa7.47□□□□□ -1.21
DDX56-205ENST00000433257 KRTAP13-4Q3LI77 160 aa7.44□□□□□ -1.22
DDX56-205ENST00000433257 CRIPTQ9P021 101 aa7.44□□□□□ -1.22
DDX56-205ENST00000433257 A0A0D9SG42 100 aa7.44□□□□□ -1.22
DDX56-205ENST00000433257 M0QZ58 72 aa7.41□□□□□ -1.22
DDX56-205ENST00000433257 SPINT4Q6UDR6 99 aa7.39□□□□□ -1.23
DDX56-205ENST00000433257 TPRXLQ17RH7 258 aa7.35□□□□□ -1.23
DDX56-205ENST00000433257 P0C880 135 aa7.35□□□□□ -1.23
DDX56-205ENST00000433257 LPAP08519 4548 aa7.34□□□□□ -1.23
DDX56-205ENST00000433257 LRP2P98164 4655 aa7.32□□□□□ -1.24
DDX56-205ENST00000433257 UBR4Q5T4S7 5183 aa7.29□□□□□ -1.24
DDX56-205ENST00000433257 KRTAP12-1P59990 96 aa7.28□□□□□ -1.24
DDX56-205ENST00000433257 KRTAP12-2P59991 146 aa7.28□□□□□ -1.24
DDX56-205ENST00000433257 KRTAP15-1Q3LI76 137 aa7.2□□□□□ -1.26
DDX56-205ENST00000433257 C10orf95Q9H7T3 257 aa7.19□□□□□ -1.26
DDX56-205ENST00000433257 RNF213Q63HN8 5207 aa7.15□□□□□ -1.27
DDX56-205ENST00000433257 SEC61BP60468 96 aaKnown RBP7.12□□□□□ -1.27
DDX56-205ENST00000433257 MUC17Q685J3 4493 aa7.07□□□□□ -1.28
DDX56-205ENST00000433257 MUC2Q02817 5179 aa7.07□□□□□ -1.28
DDX56-205ENST00000433257 R4GN34 69 aa7.06□□□□□ -1.28
DDX56-205ENST00000433257 NDUFAF8A1L188 74 aa7.03□□□□□ -1.28
DDX56-205ENST00000433257 PP632Q6XCG6 107 aa6.94□□□□□ -1.3
DDX56-205ENST00000433257 KRTAP4-1Q9BYQ7 146 aa6.91□□□□□ -1.3
DDX56-205ENST00000433257 PLAC4Q8WY50 150 aa6.85□□□□□ -1.31
DDX56-205ENST00000433257 FAT4Q6V0I7 4981 aa6.79□□□□□ -1.32
DDX56-205ENST00000433257 CAMK2N1Q7Z7J9 78 aa6.73□□□□□ -1.33
DDX56-205ENST00000433257 KRTAP23-1A1A580 65 aa6.71□□□□□ -1.33
DDX56-205ENST00000433257 LUZP6Q538Z0 58 aa6.7□□□□□ -1.34
DDX56-205ENST00000433257 KRTAP19-2Q3LHN2 52 aa6.68□□□□□ -1.34
DDX56-205ENST00000433257 LCE2CQ5TA81 110 aa6.67□□□□□ -1.34
DDX56-205ENST00000433257 LORP23490 312 aaPredicted RBP6.66□□□□□ -1.34
DDX56-205ENST00000433257 LCE2AQ5TA79 106 aaPredicted RBP6.65□□□□□ -1.34
DDX56-205ENST00000433257 M0R2T5 61 aa6.59□□□□□ -1.35
DDX56-205ENST00000433257 MT1HP80294 61 aa6.59□□□□□ -1.35
DDX56-205ENST00000433257 TNP1P09430 55 aa6.58□□□□□ -1.36
DDX56-205ENST00000433257 FLGP20930 4061 aaPredicted RBP6.57□□□□□ -1.36
DDX56-205ENST00000433257 A0A0A0MQY5 61 aa6.53□□□□□ -1.36
DDX56-205ENST00000433257 SPRR5A0A1B0GTR4 108 aa6.39□□□□□ -1.39
DDX56-205ENST00000433257 KRTAP9-8Q9BYQ0 159 aa6.28□□□□□ -1.4
DDX56-205ENST00000433257 SPRR2GQ9BYE4 73 aa6.27□□□□□ -1.41
DDX56-205ENST00000433257 KRTAP9-2Q9BYQ4 174 aa6.25□□□□□ -1.41
DDX56-205ENST00000433257 LCE2DQ5TA82 110 aaPredicted RBP6.23□□□□□ -1.41
DDX56-205ENST00000433257 MT2AP02795 61 aa6.21□□□□□ -1.42
DDX56-205ENST00000433257 KRTAP10-10P60014 251 aa6.21□□□□□ -1.42
DDX56-205ENST00000433257 MT1FP04733 61 aa6.17□□□□□ -1.42
DDX56-205ENST00000433257 FSIP2Q5CZC0 6907 aa6.1□□□□□ -1.43
DDX56-205ENST00000433257 KRTAP19-1Q8IUB9 90 aa6.1□□□□□ -1.43
DDX56-205ENST00000433257 KRTAP9-3Q9BYQ3 159 aa6.07□□□□□ -1.44
DDX56-205ENST00000433257 LCE3AQ5TA76 89 aa6.01□□□□□ -1.45
DDX56-205ENST00000433257 KRTAP8-1Q8IUC2 63 aa6.01□□□□□ -1.45
DDX56-205ENST00000433257 USH2AO75445 5202 aa5.99□□□□□ -1.45
DDX56-205ENST00000433257 KRTAP19-8Q3LI54 63 aa5.98□□□□□ -1.45
DDX56-205ENST00000433257 LCE2BO14633 110 aa5.98□□□□□ -1.45
DDX56-205ENST00000433257 CRCT1Q9UGL9 99 aa5.97□□□□□ -1.45
DDX56-205ENST00000433257 KRTAP9-6A0A140TA67 174 aa5.94□□□□□ -1.46
DDX56-205ENST00000433257 INE1O15225 51 aa5.94□□□□□ -1.46
DDX56-205ENST00000433257 PRO2289Q9P1D8 64 aa5.91□□□□□ -1.46
DDX56-205ENST00000433257 SSPOA2VEC9 5147 aa5.86□□□□□ -1.47
DDX56-205ENST00000433257 KRTAP10-12P60413 245 aa5.82□□□□□ -1.48
DDX56-205ENST00000433257 KRTAP12-3P60328 96 aa5.81□□□□□ -1.48
DDX56-205ENST00000433257 KRTAP10-5P60370 271 aa5.79□□□□□ -1.48
DDX56-205ENST00000433257 MT1XP80297 61 aa5.76□□□□□ -1.49
DDX56-205ENST00000433257 MT1BP07438 61 aa5.75□□□□□ -1.49
DDX56-205ENST00000433257 KRTAP19-6Q3LI70 58 aa5.72□□□□□ -1.49
DDX56-205ENST00000433257 FCGBPQ9Y6R7 5405 aaPredicted RBP5.7□□□□□ -1.5
DDX56-205ENST00000433257 KRTAP10-7P60409 375 aaPredicted RBP5.55□□□□□ -1.52
DDX56-205ENST00000433257 KRTAP19-4Q3LI73 84 aa5.54□□□□□ -1.52
DDX56-205ENST00000433257 MACF1Q9UPN3 7388 aaKnown RBP5.53□□□□□ -1.52
DDX56-205ENST00000433257 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.52□□□□□ -1.53
DDX56-205ENST00000433257 LCE3CQ5T5A8 94 aa5.49□□□□□ -1.53
DDX56-205ENST00000433257 SYNE2Q8WXH0 6885 aaKnown RBP5.47□□□□□ -1.53
DDX56-205ENST00000433257 KRTAP19-5Q3LI72 72 aa5.41□□□□□ -1.54
DDX56-205ENST00000433257 KRTAP9-7A8MTY7 169 aa5.38□□□□□ -1.55
DDX56-205ENST00000433257 KRTAP6-3Q3LI67 103 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 841 ms