RNA–Protein interactions for RNA: ENST00000431742.2

CSTF3-202, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 2 BASIC

Gene CSTF3, Length 715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-202ENST00000431742 MP68P56378 58 aa7.01□□□□□ -1.29
CSTF3-202ENST00000431742 C5orf47Q569G3 176 aa7.01□□□□□ -1.29
CSTF3-202ENST00000431742 C1orf64Q8NEQ6 169 aa7.01□□□□□ -1.29
CSTF3-202ENST00000431742 LINC00208Q96KT6 92 aa7□□□□□ -1.29
CSTF3-202ENST00000431742 KRTAP4-9Q9BYQ8 210 aa6.99□□□□□ -1.29
CSTF3-202ENST00000431742 H3BPC8 53 aa6.97□□□□□ -1.29
CSTF3-202ENST00000431742 KRTAP9-8Q9BYQ0 159 aa6.97□□□□□ -1.29
CSTF3-202ENST00000431742 SMIM20Q8N5G0 67 aa6.96□□□□□ -1.3
CSTF3-202ENST00000431742 TRAV7A0A075B6U4 112 aa6.95□□□□□ -1.3
CSTF3-202ENST00000431742 KRTAP9-7A8MTY7 169 aa6.94□□□□□ -1.3
CSTF3-202ENST00000431742 KLKP1Q107X0 134 aa6.94□□□□□ -1.3
CSTF3-202ENST00000431742 MT2AP02795 61 aa6.9□□□□□ -1.3
CSTF3-202ENST00000431742 S4R3F8 94 aa6.87□□□□□ -1.31
CSTF3-202ENST00000431742 LCA10Q71F78 164 aa6.85□□□□□ -1.31
CSTF3-202ENST00000431742 A8MUN3 132 aa6.84□□□□□ -1.31
CSTF3-202ENST00000431742 MT1FP04733 61 aa6.84□□□□□ -1.31
CSTF3-202ENST00000431742 SERP2Q8N6R1 65 aa6.83□□□□□ -1.32
CSTF3-202ENST00000431742 KRTAP4-2Q9BYR5 136 aa6.79□□□□□ -1.32
CSTF3-202ENST00000431742 CSAG1Q6PB30 78 aa6.78□□□□□ -1.32
CSTF3-202ENST00000431742 KRTAP10-10P60014 251 aa6.77□□□□□ -1.33
CSTF3-202ENST00000431742 DMAC1Q96GE9 116 aa6.77□□□□□ -1.33
CSTF3-202ENST00000431742 SNURFQ9Y675 71 aa6.76□□□□□ -1.33
CSTF3-202ENST00000431742 LCE5AQ5TCM9 118 aa6.75□□□□□ -1.33
CSTF3-202ENST00000431742 KRTAP4-11Q9BYQ6 195 aa6.75□□□□□ -1.33
CSTF3-202ENST00000431742 C20orf197Q8N268 126 aa6.74□□□□□ -1.33
CSTF3-202ENST00000431742 KRTAP9-3Q9BYQ3 159 aa6.73□□□□□ -1.33
CSTF3-202ENST00000431742 COX7CP15954 63 aa6.7□□□□□ -1.34
CSTF3-202ENST00000431742 NDUFC1O43677 76 aa6.69□□□□□ -1.34
CSTF3-202ENST00000431742 USH2AO75445 5202 aa6.66□□□□□ -1.34
CSTF3-202ENST00000431742 FSIP2Q5CZC0 6907 aa6.66□□□□□ -1.34
CSTF3-202ENST00000431742 SPANXA2-OT1Q8N9U9 137 aa6.65□□□□□ -1.34
CSTF3-202ENST00000431742 ACYP2P14621 99 aa6.61□□□□□ -1.35
CSTF3-202ENST00000431742 ANAPC13Q9BS18 74 aa6.61□□□□□ -1.35
CSTF3-202ENST00000431742 H0YAA0 97 aa6.6□□□□□ -1.35
CSTF3-202ENST00000431742 CYSTM1Q9H1C7 97 aa6.57□□□□□ -1.36
CSTF3-202ENST00000431742 CRCT1Q9UGL9 99 aa6.56□□□□□ -1.36
CSTF3-202ENST00000431742 H7BZZ5 65 aa6.55□□□□□ -1.36
CSTF3-202ENST00000431742 SSPOA2VEC9 5147 aa6.53□□□□□ -1.36
CSTF3-202ENST00000431742 ADM2Q7Z4H4 148 aa6.5□□□□□ -1.37
CSTF3-202ENST00000431742 SPRR2GQ9BYE4 73 aa6.5□□□□□ -1.37
CSTF3-202ENST00000431742 CCDC179H3BU77 68 aa6.49□□□□□ -1.37
CSTF3-202ENST00000431742 CRIPTQ9P021 101 aa6.49□□□□□ -1.37
CSTF3-202ENST00000431742 CHKB-CPT1BH3BT56 60 aa6.48□□□□□ -1.37
CSTF3-202ENST00000431742 SPTSSBQ8NFR3 76 aa6.47□□□□□ -1.37
CSTF3-202ENST00000431742 COA5Q86WW8 74 aa6.43□□□□□ -1.38
CSTF3-202ENST00000431742 KRTAP19-8Q3LI54 63 aa6.42□□□□□ -1.38
CSTF3-202ENST00000431742 P0C880 135 aa6.41□□□□□ -1.38
CSTF3-202ENST00000431742 MT1BP07438 61 aa6.38□□□□□ -1.39
CSTF3-202ENST00000431742 KRTAP19-6Q3LI70 58 aa6.36□□□□□ -1.39
CSTF3-202ENST00000431742 Q5VV11 94 aa6.34□□□□□ -1.39
CSTF3-202ENST00000431742 FCGBPQ9Y6R7 5405 aaPredicted RBP6.33□□□□□ -1.4
CSTF3-202ENST00000431742 ATP5EP56381 51 aaPredicted RBP6.32□□□□□ -1.4
CSTF3-202ENST00000431742 R4GN34 69 aa6.3□□□□□ -1.4
CSTF3-202ENST00000431742 M0QZ58 72 aa6.27□□□□□ -1.41
CSTF3-202ENST00000431742 TMEM258P61165 79 aa6.27□□□□□ -1.41
CSTF3-202ENST00000431742 KRTAP10-5P60370 271 aa6.16□□□□□ -1.42
CSTF3-202ENST00000431742 SEC61GP60059 68 aa6.15□□□□□ -1.42
CSTF3-202ENST00000431742 KRTAP13-4Q3LI77 160 aa6.14□□□□□ -1.43
CSTF3-202ENST00000431742 LINC01554Q52M75 96 aa6.14□□□□□ -1.43
CSTF3-202ENST00000431742 SERP1Q9Y6X1 66 aa6.14□□□□□ -1.43
CSTF3-202ENST00000431742 A6NN06 94 aa6.13□□□□□ -1.43
CSTF3-202ENST00000431742 PLAC4Q8WY50 150 aa6.11□□□□□ -1.43
CSTF3-202ENST00000431742 MACF1Q9UPN3 7388 aaKnown RBP6.09□□□□□ -1.43
CSTF3-202ENST00000431742 A0A1B0GU69 56 aa6.07□□□□□ -1.44
CSTF3-202ENST00000431742 A0A1B0GU33 70 aa6.05□□□□□ -1.44
CSTF3-202ENST00000431742 MT1XP80297 61 aa6.05□□□□□ -1.44
CSTF3-202ENST00000431742 PCP4P48539 62 aa6.04□□□□□ -1.44
CSTF3-202ENST00000431742 LINC01558Q9Y6Z2 57 aa6.02□□□□□ -1.45
CSTF3-202ENST00000431742 KRTAP23-1A1A580 65 aa6.01□□□□□ -1.45
CSTF3-202ENST00000431742 SYNE2Q8WXH0 6885 aaKnown RBP6.01□□□□□ -1.45
CSTF3-202ENST00000431742 PRO2289Q9P1D8 64 aa6□□□□□ -1.45
CSTF3-202ENST00000431742 SPATA8Q6RVD6 105 aa5.99□□□□□ -1.45
CSTF3-202ENST00000431742 PRR15LQ9BU68 103 aa5.97□□□□□ -1.45
CSTF3-202ENST00000431742 KRTAP5-3Q6L8H2 238 aa5.95□□□□□ -1.46
CSTF3-202ENST00000431742 A0A0D9SG42 100 aa5.92□□□□□ -1.46
CSTF3-202ENST00000431742 SMIM26A0A096LP01 95 aa5.87□□□□□ -1.47
CSTF3-202ENST00000431742 KRTAP12-1P59990 96 aa5.86□□□□□ -1.47
CSTF3-202ENST00000431742 KRTAP12-2P59991 146 aa5.85□□□□□ -1.47
CSTF3-202ENST00000431742 A8MU10 97 aa5.84□□□□□ -1.47
CSTF3-202ENST00000431742 Q1T7F1 81 aa5.84□□□□□ -1.47
CSTF3-202ENST00000431742 KRTAP15-1Q3LI76 137 aa5.84□□□□□ -1.47
CSTF3-202ENST00000431742 V9GYY9 64 aa5.84□□□□□ -1.47
CSTF3-202ENST00000431742 CAMK2N1Q7Z7J9 78 aa5.83□□□□□ -1.48
CSTF3-202ENST00000431742 RPS28P62857 69 aaKnown RBP5.82□□□□□ -1.48
CSTF3-202ENST00000431742 KRTAP6-3Q3LI67 103 aa5.82□□□□□ -1.48
CSTF3-202ENST00000431742 SPINT4Q6UDR6 99 aa5.8□□□□□ -1.48
CSTF3-202ENST00000431742 UQCR11O14957 56 aa5.79□□□□□ -1.48
CSTF3-202ENST00000431742 KMT2DO14686 5537 aa5.78□□□□□ -1.48
CSTF3-202ENST00000431742 KRTAP10-7P60409 375 aaPredicted RBP5.76□□□□□ -1.49
CSTF3-202ENST00000431742 KRTAP10-12P60413 245 aa5.76□□□□□ -1.49
CSTF3-202ENST00000431742 PSPHP1O15172 72 aa5.75□□□□□ -1.49
CSTF3-202ENST00000431742 KRTAP5-9P26371 169 aa5.71□□□□□ -1.5
CSTF3-202ENST00000431742 MIR22HGQ0VDD5 57 aa5.69□□□□□ -1.5
CSTF3-202ENST00000431742 NEBP20929 6669 aa5.65□□□□□ -1.5
CSTF3-202ENST00000431742 KRTAP8-1Q8IUC2 63 aa5.64□□□□□ -1.51
CSTF3-202ENST00000431742 MUC12Q9UKN1 5478 aa5.64□□□□□ -1.51
CSTF3-202ENST00000431742 C10orf95Q9H7T3 257 aa5.58□□□□□ -1.52
CSTF3-202ENST00000431742 A6NED7 52 aa5.57□□□□□ -1.52
CSTF3-202ENST00000431742 SPRR2FQ96RM1 72 aa5.57□□□□□ -1.52
CSTF3-202ENST00000431742 MDN1Q9NU22 5596 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms