RNA–Protein interactions for RNA: ENST00000430149.2

CDKN1C-203, Transcript of cyclin dependent kinase inhibitor 1C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDKN1C, Length 1,570 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1C-203ENST00000430149 ACYP2P14621 99 aa9.73□□□□□ -0.85
CDKN1C-203ENST00000430149 TMEM258P61165 79 aa9.71□□□□□ -0.85
CDKN1C-203ENST00000430149 S4R3F8 94 aa9.71□□□□□ -0.85
CDKN1C-203ENST00000430149 LCA10Q71F78 164 aa9.67□□□□□ -0.86
CDKN1C-203ENST00000430149 KRTAP9-2Q9BYQ4 174 aa9.67□□□□□ -0.86
CDKN1C-203ENST00000430149 ATP5EP56381 51 aaPredicted RBP9.66□□□□□ -0.86
CDKN1C-203ENST00000430149 KRTAP9-8Q9BYQ0 159 aa9.63□□□□□ -0.87
CDKN1C-203ENST00000430149 KRTAP3-3Q9BYR6 98 aa9.63□□□□□ -0.87
CDKN1C-203ENST00000430149 COA5Q86WW8 74 aa9.59□□□□□ -0.87
CDKN1C-203ENST00000430149 CHKB-CPT1BH3BT56 60 aa9.57□□□□□ -0.88
CDKN1C-203ENST00000430149 MT2AP02795 61 aa9.56□□□□□ -0.88
CDKN1C-203ENST00000430149 CSAG1Q6PB30 78 aa9.53□□□□□ -0.88
CDKN1C-203ENST00000430149 MT1FP04733 61 aa9.5□□□□□ -0.89
CDKN1C-203ENST00000430149 LCE2DQ5TA82 110 aaPredicted RBP9.47□□□□□ -0.89
CDKN1C-203ENST00000430149 SPTSSBQ8NFR3 76 aa9.44□□□□□ -0.9
CDKN1C-203ENST00000430149 KRTAP10-10P60014 251 aa9.42□□□□□ -0.9
CDKN1C-203ENST00000430149 SERP1Q9Y6X1 66 aa9.41□□□□□ -0.9
CDKN1C-203ENST00000430149 KRTAP9-6A0A140TA67 174 aa9.39□□□□□ -0.91
CDKN1C-203ENST00000430149 KRTAP9-3Q9BYQ3 159 aa9.31□□□□□ -0.92
CDKN1C-203ENST00000430149 H0YAA0 97 aa9.27□□□□□ -0.93
CDKN1C-203ENST00000430149 RPS28P62857 69 aaKnown RBP9.25□□□□□ -0.93
CDKN1C-203ENST00000430149 ADM2Q7Z4H4 148 aa9.24□□□□□ -0.93
CDKN1C-203ENST00000430149 LCE2BO14633 110 aa9.19□□□□□ -0.94
CDKN1C-203ENST00000430149 KRTAP3-2Q9BYR7 98 aa9.19□□□□□ -0.94
CDKN1C-203ENST00000430149 FSIP2Q5CZC0 6907 aa9.16□□□□□ -0.94
CDKN1C-203ENST00000430149 USH2AO75445 5202 aa9.15□□□□□ -0.94
CDKN1C-203ENST00000430149 P0C880 135 aa9.15□□□□□ -0.95
CDKN1C-203ENST00000430149 CRCT1Q9UGL9 99 aa9.12□□□□□ -0.95
CDKN1C-203ENST00000430149 SMIM26A0A096LP01 95 aa9.11□□□□□ -0.95
CDKN1C-203ENST00000430149 LINC01558Q9Y6Z2 57 aa9.11□□□□□ -0.95
CDKN1C-203ENST00000430149 SEC61GP60059 68 aa9.1□□□□□ -0.95
CDKN1C-203ENST00000430149 KRTAP19-1Q8IUB9 90 aa9.08□□□□□ -0.96
CDKN1C-203ENST00000430149 A0A1B0GU69 56 aa9.07□□□□□ -0.96
CDKN1C-203ENST00000430149 Q1T7F1 81 aa9.02□□□□□ -0.97
CDKN1C-203ENST00000430149 V9GYY9 64 aa9.01□□□□□ -0.97
CDKN1C-203ENST00000430149 PRR15LQ9BU68 103 aa8.99□□□□□ -0.97
CDKN1C-203ENST00000430149 SPRR2GQ9BYE4 73 aa8.99□□□□□ -0.97
CDKN1C-203ENST00000430149 CRIPTQ9P021 101 aa8.99□□□□□ -0.97
CDKN1C-203ENST00000430149 SSPOA2VEC9 5147 aa8.95□□□□□ -0.98
CDKN1C-203ENST00000430149 R4GN34 69 aa8.94□□□□□ -0.98
CDKN1C-203ENST00000430149 M0QZ58 72 aa8.91□□□□□ -0.98
CDKN1C-203ENST00000430149 A0A1B0GU33 70 aa8.9□□□□□ -0.98
CDKN1C-203ENST00000430149 PSPHP1O15172 72 aa8.9□□□□□ -0.99
CDKN1C-203ENST00000430149 KRTAP19-8Q3LI54 63 aa8.86□□□□□ -0.99
CDKN1C-203ENST00000430149 KRTAP13-4Q3LI77 160 aa8.86□□□□□ -0.99
CDKN1C-203ENST00000430149 MT1BP07438 61 aa8.84□□□□□ -0.99
CDKN1C-203ENST00000430149 Q5VV11 94 aa8.82□□□□□ -1
CDKN1C-203ENST00000430149 SPATA8Q6RVD6 105 aa8.79□□□□□ -1
CDKN1C-203ENST00000430149 SVIPQ8NHG7 77 aa8.77□□□□□ -1.01
CDKN1C-203ENST00000430149 LINC01554Q52M75 96 aa8.76□□□□□ -1.01
CDKN1C-203ENST00000430149 UQCR11O14957 56 aa8.73□□□□□ -1.01
CDKN1C-203ENST00000430149 KRTAP19-6Q3LI70 58 aa8.71□□□□□ -1.02
CDKN1C-203ENST00000430149 FCGBPQ9Y6R7 5405 aaPredicted RBP8.67□□□□□ -1.02
CDKN1C-203ENST00000430149 A0A0D9SG42 100 aa8.65□□□□□ -1.02
CDKN1C-203ENST00000430149 A6NED7 52 aa8.62□□□□□ -1.03
CDKN1C-203ENST00000430149 A8MU10 97 aa8.62□□□□□ -1.03
CDKN1C-203ENST00000430149 MIR22HGQ0VDD5 57 aa8.61□□□□□ -1.03
CDKN1C-203ENST00000430149 A6NN06 94 aa8.56□□□□□ -1.04
CDKN1C-203ENST00000430149 PLAC4Q8WY50 150 aa8.52□□□□□ -1.04
CDKN1C-203ENST00000430149 KRTAP10-5P60370 271 aa8.49□□□□□ -1.05
CDKN1C-203ENST00000430149 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.48□□□□□ -1.05
CDKN1C-203ENST00000430149 KRTAP12-1P59990 96 aa8.48□□□□□ -1.05
CDKN1C-203ENST00000430149 SPINT4Q6UDR6 99 aa8.48□□□□□ -1.05
CDKN1C-203ENST00000430149 KRTAP12-2P59991 146 aa8.45□□□□□ -1.06
CDKN1C-203ENST00000430149 KRTAP9-7A8MTY7 169 aa8.44□□□□□ -1.06
CDKN1C-203ENST00000430149 MT1XP80297 61 aa8.41□□□□□ -1.06
CDKN1C-203ENST00000430149 CDC42SE1Q9NRR8 79 aa8.41□□□□□ -1.06
CDKN1C-203ENST00000430149 CAMK2N1Q7Z7J9 78 aa8.32□□□□□ -1.08
CDKN1C-203ENST00000430149 MACF1Q9UPN3 7388 aaKnown RBP8.32□□□□□ -1.08
CDKN1C-203ENST00000430149 BRK1Q8WUW1 75 aa8.31□□□□□ -1.08
CDKN1C-203ENST00000430149 PRO2289Q9P1D8 64 aa8.28□□□□□ -1.08
CDKN1C-203ENST00000430149 K7ERS5 55 aa8.27□□□□□ -1.09
CDKN1C-203ENST00000430149 PRO0628Q9UI54 55 aa8.21□□□□□ -1.1
CDKN1C-203ENST00000430149 SYNE2Q8WXH0 6885 aaKnown RBP8.14□□□□□ -1.11
CDKN1C-203ENST00000430149 KRTAP10-7P60409 375 aaPredicted RBP8.06□□□□□ -1.12
CDKN1C-203ENST00000430149 C10orf95Q9H7T3 257 aa8.06□□□□□ -1.12
CDKN1C-203ENST00000430149 KMT2DO14686 5537 aa8.03□□□□□ -1.12
CDKN1C-203ENST00000430149 KRTAP6-3Q3LI67 103 aa8.01□□□□□ -1.13
CDKN1C-203ENST00000430149 KRTAP10-12P60413 245 aa7.95□□□□□ -1.14
CDKN1C-203ENST00000430149 KRTAP4-8A0A0G2JLE6 195 aa7.93□□□□□ -1.14
CDKN1C-203ENST00000430149 KRTAP4-8Q9BYQ9 185 aa7.93□□□□□ -1.14
CDKN1C-203ENST00000430149 ROMO1P60602 79 aa7.88□□□□□ -1.15
CDKN1C-203ENST00000430149 PMAIP1Q13794 54 aa7.88□□□□□ -1.15
CDKN1C-203ENST00000430149 TNP1P09430 55 aa7.86□□□□□ -1.15
CDKN1C-203ENST00000430149 KRTAP8-1Q8IUC2 63 aa7.81□□□□□ -1.16
CDKN1C-203ENST00000430149 KRTAP5-9P26371 169 aa7.79□□□□□ -1.16
CDKN1C-203ENST00000430149 KRTAP25-1Q3LHN0 102 aa7.77□□□□□ -1.17
CDKN1C-203ENST00000430149 MUC12Q9UKN1 5478 aa7.74□□□□□ -1.17
CDKN1C-203ENST00000430149 SPRR2FQ96RM1 72 aa7.71□□□□□ -1.18
CDKN1C-203ENST00000430149 NEBP20929 6669 aa7.61□□□□□ -1.19
CDKN1C-203ENST00000430149 LCE3AQ5TA76 89 aa7.61□□□□□ -1.19
CDKN1C-203ENST00000430149 MDN1Q9NU22 5596 aa7.6□□□□□ -1.19
CDKN1C-203ENST00000430149 KTN1-AS1Q86SY8 53 aa7.59□□□□□ -1.19
CDKN1C-203ENST00000430149 KRTAP19-7Q3SYF9 63 aa7.51□□□□□ -1.21
CDKN1C-203ENST00000430149 SPRR2EP22531 72 aa7.5□□□□□ -1.21
CDKN1C-203ENST00000430149 SPRR2BP35325 72 aa7.5□□□□□ -1.21
CDKN1C-203ENST00000430149 SPRR2AP35326 72 aa7.5□□□□□ -1.21
CDKN1C-203ENST00000430149 KRTAP23-1A1A580 65 aa7.49□□□□□ -1.21
CDKN1C-203ENST00000430149 KRTAP19-5Q3LI72 72 aa7.46□□□□□ -1.21
CDKN1C-203ENST00000430149 LCE1AQ5T7P2 110 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms