RNA–Protein interactions for RNA: ENST00000428154.5

PMPCB-202, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 1 (best) BASIC

Gene PMPCB, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-202ENST00000428154 H0YAA0 97 aa10.33□□□□□ -0.76
PMPCB-202ENST00000428154 TPRXLQ17RH7 258 aa10.33□□□□□ -0.76
PMPCB-202ENST00000428154 RYR3Q15413 4870 aa10.29□□□□□ -0.76
PMPCB-202ENST00000428154 RBM12B-AS1Q9P1G2 102 aa10.27□□□□□ -0.76
PMPCB-202ENST00000428154 S4R3F8 94 aa10.27□□□□□ -0.76
PMPCB-202ENST00000428154 KRTAP3-3Q9BYR6 98 aa10.25□□□□□ -0.77
PMPCB-202ENST00000428154 K7ERS5 55 aa10.17□□□□□ -0.78
PMPCB-202ENST00000428154 KIAA1109Q2LD37 5005 aa10.13□□□□□ -0.79
PMPCB-202ENST00000428154 KRTAP10-6P60371 365 aaPredicted RBP10.12□□□□□ -0.79
PMPCB-202ENST00000428154 PRAC1Q96KF2 57 aa10.08□□□□□ -0.8
PMPCB-202ENST00000428154 MYCBP2O75592 4640 aa10.07□□□□□ -0.8
PMPCB-202ENST00000428154 ADM2Q7Z4H4 148 aa10.06□□□□□ -0.8
PMPCB-202ENST00000428154 KRTAP3-2Q9BYR7 98 aa10.06□□□□□ -0.8
PMPCB-202ENST00000428154 CSAG1Q6PB30 78 aa9.99□□□□□ -0.81
PMPCB-202ENST00000428154 SEC61BP60468 96 aaKnown RBP9.96□□□□□ -0.81
PMPCB-202ENST00000428154 KRTAP4-5Q9BYR2 181 aa9.92□□□□□ -0.82
PMPCB-202ENST00000428154 EPPK1P58107 5090 aaKnown RBP9.89□□□□□ -0.83
PMPCB-202ENST00000428154 KRTAP13-4Q3LI77 160 aa9.89□□□□□ -0.83
PMPCB-202ENST00000428154 P0C880 135 aa9.88□□□□□ -0.83
PMPCB-202ENST00000428154 LINC01554Q52M75 96 aa9.87□□□□□ -0.83
PMPCB-202ENST00000428154 J3QL48 77 aa9.84□□□□□ -0.83
PMPCB-202ENST00000428154 LRP2P98164 4655 aa9.83□□□□□ -0.84
PMPCB-202ENST00000428154 M0QZ58 72 aa9.82□□□□□ -0.84
PMPCB-202ENST00000428154 ROMO1P60602 79 aa9.8□□□□□ -0.84
PMPCB-202ENST00000428154 A0A0D9SG42 100 aa9.78□□□□□ -0.84
PMPCB-202ENST00000428154 KRTAP25-1Q3LHN0 102 aa9.78□□□□□ -0.84
PMPCB-202ENST00000428154 LPAP08519 4548 aa9.71□□□□□ -0.86
PMPCB-202ENST00000428154 H3BS24 57 aa9.63□□□□□ -0.87
PMPCB-202ENST00000428154 ABCA13Q86UQ4 5058 aa9.6□□□□□ -0.87
PMPCB-202ENST00000428154 KRTAP12-1P59990 96 aa9.6□□□□□ -0.87
PMPCB-202ENST00000428154 KRTAP12-2P59991 146 aa9.59□□□□□ -0.87
PMPCB-202ENST00000428154 MUC17Q685J3 4493 aa9.57□□□□□ -0.88
PMPCB-202ENST00000428154 KRTAP4-1Q9BYQ7 146 aa9.55□□□□□ -0.88
PMPCB-202ENST00000428154 SPINT4Q6UDR6 99 aa9.53□□□□□ -0.88
PMPCB-202ENST00000428154 R4GN34 69 aa9.51□□□□□ -0.89
PMPCB-202ENST00000428154 HERC2O95714 4834 aa9.47□□□□□ -0.89
PMPCB-202ENST00000428154 KRTAP19-2Q3LHN2 52 aa9.47□□□□□ -0.89
PMPCB-202ENST00000428154 CRIPTQ9P021 101 aa9.42□□□□□ -0.9
PMPCB-202ENST00000428154 BIRC6Q9NR09 4857 aa9.38□□□□□ -0.91
PMPCB-202ENST00000428154 LORP23490 312 aaPredicted RBP9.23□□□□□ -0.93
PMPCB-202ENST00000428154 C10orf95Q9H7T3 257 aa9.19□□□□□ -0.94
PMPCB-202ENST00000428154 FLGP20930 4061 aaPredicted RBP9.17□□□□□ -0.94
PMPCB-202ENST00000428154 HERC1Q15751 4861 aa8.99□□□□□ -0.97
PMPCB-202ENST00000428154 CAMK2N1Q7Z7J9 78 aa8.99□□□□□ -0.97
PMPCB-202ENST00000428154 HMCN2Q8NDA2 5059 aa8.96□□□□□ -0.98
PMPCB-202ENST00000428154 LCE2CQ5TA81 110 aa8.95□□□□□ -0.98
PMPCB-202ENST00000428154 PP632Q6XCG6 107 aa8.91□□□□□ -0.98
PMPCB-202ENST00000428154 PCLOQ9Y6V0 5065 aa8.86□□□□□ -0.99
PMPCB-202ENST00000428154 KRTAP15-1Q3LI76 137 aa8.83□□□□□ -1
PMPCB-202ENST00000428154 MUC2Q02817 5179 aa8.81□□□□□ -1
PMPCB-202ENST00000428154 SPRR2GQ9BYE4 73 aa8.8□□□□□ -1
PMPCB-202ENST00000428154 M0R2T5 61 aa8.75□□□□□ -1.01
PMPCB-202ENST00000428154 KRTAP23-1A1A580 65 aa8.74□□□□□ -1.01
PMPCB-202ENST00000428154 MT1HP80294 61 aa8.74□□□□□ -1.01
PMPCB-202ENST00000428154 TNP1P09430 55 aa8.71□□□□□ -1.02
PMPCB-202ENST00000428154 PLAC4Q8WY50 150 aa8.69□□□□□ -1.02
PMPCB-202ENST00000428154 KRTAP19-1Q8IUB9 90 aa8.64□□□□□ -1.03
PMPCB-202ENST00000428154 MT2AP02795 61 aa8.56□□□□□ -1.04
PMPCB-202ENST00000428154 KRTAP10-10P60014 251 aa8.54□□□□□ -1.04
PMPCB-202ENST00000428154 KRTAP9-8Q9BYQ0 159 aa8.52□□□□□ -1.05
PMPCB-202ENST00000428154 MT1FP04733 61 aa8.51□□□□□ -1.05
PMPCB-202ENST00000428154 RNF213Q63HN8 5207 aa8.48□□□□□ -1.05
PMPCB-202ENST00000428154 KRTAP19-8Q3LI54 63 aa8.46□□□□□ -1.05
PMPCB-202ENST00000428154 FAT4Q6V0I7 4981 aa8.43□□□□□ -1.06
PMPCB-202ENST00000428154 NDUFAF8A1L188 74 aa8.43□□□□□ -1.06
PMPCB-202ENST00000428154 A0A0A0MQY5 61 aa8.42□□□□□ -1.06
PMPCB-202ENST00000428154 LCE2DQ5TA82 110 aaPredicted RBP8.32□□□□□ -1.08
PMPCB-202ENST00000428154 UBR4Q5T4S7 5183 aa8.32□□□□□ -1.08
PMPCB-202ENST00000428154 MT1BP07438 61 aa8.23□□□□□ -1.09
PMPCB-202ENST00000428154 LUZP6Q538Z0 58 aa8.23□□□□□ -1.09
PMPCB-202ENST00000428154 KRTAP9-3Q9BYQ3 159 aa8.19□□□□□ -1.1
PMPCB-202ENST00000428154 KRTAP10-5P60370 271 aa8.13□□□□□ -1.11
PMPCB-202ENST00000428154 LCE3AQ5TA76 89 aa8.12□□□□□ -1.11
PMPCB-202ENST00000428154 SPRR5A0A1B0GTR4 108 aa8.12□□□□□ -1.11
PMPCB-202ENST00000428154 MT1XP80297 61 aa8.12□□□□□ -1.11
PMPCB-202ENST00000428154 KRTAP8-1Q8IUC2 63 aa8.07□□□□□ -1.12
PMPCB-202ENST00000428154 PRO2289Q9P1D8 64 aa8.06□□□□□ -1.12
PMPCB-202ENST00000428154 KRTAP10-12P60413 245 aa7.96□□□□□ -1.14
PMPCB-202ENST00000428154 LCE2AQ5TA79 106 aaPredicted RBP7.91□□□□□ -1.14
PMPCB-202ENST00000428154 KRTAP12-3P60328 96 aa7.82□□□□□ -1.16
PMPCB-202ENST00000428154 LCE2BO14633 110 aa7.81□□□□□ -1.16
PMPCB-202ENST00000428154 KRTAP10-7P60409 375 aaPredicted RBP7.8□□□□□ -1.16
PMPCB-202ENST00000428154 KRTAP19-5Q3LI72 72 aa7.49□□□□□ -1.21
PMPCB-202ENST00000428154 KRTAP19-4Q3LI73 84 aa7.41□□□□□ -1.22
PMPCB-202ENST00000428154 LCE3CQ5T5A8 94 aa7.36□□□□□ -1.23
PMPCB-202ENST00000428154 USH2AO75445 5202 aa7.29□□□□□ -1.24
PMPCB-202ENST00000428154 KRTAP4-8A0A0G2JLE6 195 aa7.29□□□□□ -1.24
PMPCB-202ENST00000428154 KRTAP4-8Q9BYQ9 185 aa7.29□□□□□ -1.24
PMPCB-202ENST00000428154 KRTAP19-6Q3LI70 58 aa7.24□□□□□ -1.25
PMPCB-202ENST00000428154 KRTAP19-7Q3SYF9 63 aa7.24□□□□□ -1.25
PMPCB-202ENST00000428154 SSPOA2VEC9 5147 aa7.08□□□□□ -1.28
PMPCB-202ENST00000428154 INE1O15225 51 aa7.08□□□□□ -1.28
PMPCB-202ENST00000428154 MT1EP04732 61 aa7.08□□□□□ -1.28
PMPCB-202ENST00000428154 MT1LQ93083 61 aa7.04□□□□□ -1.28
PMPCB-202ENST00000428154 LOC100996750A0A140TA64 210 aa7.01□□□□□ -1.29
PMPCB-202ENST00000428154 KRTAP4-6Q9BYQ5 205 aa7.01□□□□□ -1.29
PMPCB-202ENST00000428154 KMT2DO14686 5537 aa7.01□□□□□ -1.29
PMPCB-202ENST00000428154 KRTAP9-6A8MVA2 160 aa6.91□□□□□ -1.3
PMPCB-202ENST00000428154 KRTAP4-7Q9BYR0 210 aa6.82□□□□□ -1.32
PMPCB-202ENST00000428154 KRTAP2-3P0C7H8 128 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms