RNA–Protein interactions for RNA: ENST00000424964.6

TMEM248-204, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-204ENST00000424964 CSAG1Q6PB30 78 aa7.01□□□□□ -1.29
TMEM248-204ENST00000424964 A8MUN3 132 aa6.98□□□□□ -1.29
TMEM248-204ENST00000424964 KRTAP9-3Q9BYQ3 159 aa6.95□□□□□ -1.3
TMEM248-204ENST00000424964 KRTAP9-6A0A140TA67 174 aa6.92□□□□□ -1.3
TMEM248-204ENST00000424964 NDUFC1O43677 76 aa6.92□□□□□ -1.3
TMEM248-204ENST00000424964 CRCT1Q9UGL9 99 aa6.9□□□□□ -1.3
TMEM248-204ENST00000424964 SERP2Q8N6R1 65 aa6.89□□□□□ -1.31
TMEM248-204ENST00000424964 SNURFQ9Y675 71 aa6.88□□□□□ -1.31
TMEM248-204ENST00000424964 DMAC1Q96GE9 116 aa6.87□□□□□ -1.31
TMEM248-204ENST00000424964 C20orf197Q8N268 126 aa6.85□□□□□ -1.31
TMEM248-204ENST00000424964 FSIP2Q5CZC0 6907 aa6.84□□□□□ -1.32
TMEM248-204ENST00000424964 ACYP2P14621 99 aa6.79□□□□□ -1.32
TMEM248-204ENST00000424964 COX7CP15954 63 aa6.75□□□□□ -1.33
TMEM248-204ENST00000424964 H0YAA0 97 aa6.73□□□□□ -1.33
TMEM248-204ENST00000424964 ADM2Q7Z4H4 148 aa6.72□□□□□ -1.33
TMEM248-204ENST00000424964 SPANXA2-OT1Q8N9U9 137 aa6.72□□□□□ -1.33
TMEM248-204ENST00000424964 KRTAP19-1Q8IUB9 90 aa6.71□□□□□ -1.34
TMEM248-204ENST00000424964 USH2AO75445 5202 aa6.7□□□□□ -1.34
TMEM248-204ENST00000424964 CHKB-CPT1BH3BT56 60 aa6.69□□□□□ -1.34
TMEM248-204ENST00000424964 SPTSSBQ8NFR3 76 aa6.67□□□□□ -1.34
TMEM248-204ENST00000424964 ANAPC13Q9BS18 74 aa6.67□□□□□ -1.34
TMEM248-204ENST00000424964 SPRR2GQ9BYE4 73 aa6.67□□□□□ -1.34
TMEM248-204ENST00000424964 CRIPTQ9P021 101 aa6.67□□□□□ -1.34
TMEM248-204ENST00000424964 Q5VV11 94 aa6.6□□□□□ -1.35
TMEM248-204ENST00000424964 CYSTM1Q9H1C7 97 aa6.59□□□□□ -1.35
TMEM248-204ENST00000424964 SSPOA2VEC9 5147 aa6.58□□□□□ -1.36
TMEM248-204ENST00000424964 H7BZZ5 65 aa6.58□□□□□ -1.36
TMEM248-204ENST00000424964 P0C880 135 aa6.58□□□□□ -1.36
TMEM248-204ENST00000424964 KRTAP19-8Q3LI54 63 aa6.58□□□□□ -1.36
TMEM248-204ENST00000424964 KRTAP19-6Q3LI70 58 aa6.57□□□□□ -1.36
TMEM248-204ENST00000424964 MT1BP07438 61 aa6.55□□□□□ -1.36
TMEM248-204ENST00000424964 H3BS24 57 aa6.54□□□□□ -1.36
TMEM248-204ENST00000424964 COA5Q86WW8 74 aa6.54□□□□□ -1.36
TMEM248-204ENST00000424964 CCDC179H3BU77 68 aa6.52□□□□□ -1.37
TMEM248-204ENST00000424964 R4GN34 69 aa6.52□□□□□ -1.37
TMEM248-204ENST00000424964 M0QZ58 72 aa6.48□□□□□ -1.37
TMEM248-204ENST00000424964 FCGBPQ9Y6R7 5405 aaPredicted RBP6.45□□□□□ -1.38
TMEM248-204ENST00000424964 A6NN06 94 aa6.41□□□□□ -1.38
TMEM248-204ENST00000424964 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.4□□□□□ -1.38
TMEM248-204ENST00000424964 LINC01554Q52M75 96 aa6.4□□□□□ -1.38
TMEM248-204ENST00000424964 PLAC4Q8WY50 150 aa6.37□□□□□ -1.39
TMEM248-204ENST00000424964 SEC61GP60059 68 aa6.36□□□□□ -1.39
TMEM248-204ENST00000424964 ATP5EP56381 51 aaPredicted RBP6.35□□□□□ -1.39
TMEM248-204ENST00000424964 KRTAP10-5P60370 271 aa6.35□□□□□ -1.39
TMEM248-204ENST00000424964 SERP1Q9Y6X1 66 aa6.34□□□□□ -1.39
TMEM248-204ENST00000424964 TMEM258P61165 79 aa6.28□□□□□ -1.4
TMEM248-204ENST00000424964 KRTAP9-7A8MTY7 169 aa6.26□□□□□ -1.41
TMEM248-204ENST00000424964 KRTAP13-4Q3LI77 160 aa6.24□□□□□ -1.41
TMEM248-204ENST00000424964 PRO2289Q9P1D8 64 aa6.24□□□□□ -1.41
TMEM248-204ENST00000424964 MACF1Q9UPN3 7388 aaKnown RBP6.22□□□□□ -1.41
TMEM248-204ENST00000424964 A0A1B0GU69 56 aa6.22□□□□□ -1.41
TMEM248-204ENST00000424964 A0A1B0GU33 70 aa6.2□□□□□ -1.42
TMEM248-204ENST00000424964 MT1XP80297 61 aa6.2□□□□□ -1.42
TMEM248-204ENST00000424964 LOC100996750A0A140TA64 210 aa6.18□□□□□ -1.42
TMEM248-204ENST00000424964 KRTAP4-6Q9BYQ5 205 aa6.18□□□□□ -1.42
TMEM248-204ENST00000424964 SPATA8Q6RVD6 105 aa6.15□□□□□ -1.42
TMEM248-204ENST00000424964 A0A0D9SG42 100 aa6.13□□□□□ -1.43
TMEM248-204ENST00000424964 PRR15LQ9BU68 103 aa6.11□□□□□ -1.43
TMEM248-204ENST00000424964 LINC01558Q9Y6Z2 57 aa6.09□□□□□ -1.43
TMEM248-204ENST00000424964 KRTAP6-3Q3LI67 103 aa6.07□□□□□ -1.44
TMEM248-204ENST00000424964 SYNE2Q8WXH0 6885 aaKnown RBP6.07□□□□□ -1.44
TMEM248-204ENST00000424964 CAMK2N1Q7Z7J9 78 aa6.05□□□□□ -1.44
TMEM248-204ENST00000424964 SMIM26A0A096LP01 95 aa6.03□□□□□ -1.44
TMEM248-204ENST00000424964 SPINT4Q6UDR6 99 aa6.03□□□□□ -1.44
TMEM248-204ENST00000424964 PCP4P48539 62 aa6.01□□□□□ -1.45
TMEM248-204ENST00000424964 KRTAP12-2P59991 146 aa5.99□□□□□ -1.45
TMEM248-204ENST00000424964 A8MU10 97 aa5.97□□□□□ -1.45
TMEM248-204ENST00000424964 KRTAP12-1P59990 96 aa5.97□□□□□ -1.45
TMEM248-204ENST00000424964 KRTAP10-7P60409 375 aaPredicted RBP5.94□□□□□ -1.46
TMEM248-204ENST00000424964 V9GYY9 64 aa5.91□□□□□ -1.46
TMEM248-204ENST00000424964 UQCR11O14957 56 aa5.9□□□□□ -1.46
TMEM248-204ENST00000424964 KRTAP10-12P60413 245 aa5.89□□□□□ -1.47
TMEM248-204ENST00000424964 KRTAP8-1Q8IUC2 63 aa5.89□□□□□ -1.47
TMEM248-204ENST00000424964 KRTAP5-9P26371 169 aa5.88□□□□□ -1.47
TMEM248-204ENST00000424964 KRTAP4-8A0A0G2JLE6 195 aa5.87□□□□□ -1.47
TMEM248-204ENST00000424964 KRTAP4-8Q9BYQ9 185 aa5.87□□□□□ -1.47
TMEM248-204ENST00000424964 Q1T7F1 81 aa5.86□□□□□ -1.47
TMEM248-204ENST00000424964 KMT2DO14686 5537 aa5.85□□□□□ -1.47
TMEM248-204ENST00000424964 PSPHP1O15172 72 aa5.85□□□□□ -1.47
TMEM248-204ENST00000424964 SPRR2FQ96RM1 72 aa5.82□□□□□ -1.48
TMEM248-204ENST00000424964 RPS28P62857 69 aaKnown RBP5.8□□□□□ -1.48
TMEM248-204ENST00000424964 MIR22HGQ0VDD5 57 aa5.8□□□□□ -1.48
TMEM248-204ENST00000424964 MUC12Q9UKN1 5478 aa5.72□□□□□ -1.49
TMEM248-204ENST00000424964 C10orf95Q9H7T3 257 aa5.69□□□□□ -1.5
TMEM248-204ENST00000424964 SPRR2EP22531 72 aa5.68□□□□□ -1.5
TMEM248-204ENST00000424964 SPRR2BP35325 72 aa5.68□□□□□ -1.5
TMEM248-204ENST00000424964 SPRR2AP35326 72 aa5.68□□□□□ -1.5
TMEM248-204ENST00000424964 NEBP20929 6669 aa5.67□□□□□ -1.5
TMEM248-204ENST00000424964 A6NED7 52 aa5.67□□□□□ -1.5
TMEM248-204ENST00000424964 K7ERS5 55 aa5.66□□□□□ -1.5
TMEM248-204ENST00000424964 TNP1P09430 55 aa5.65□□□□□ -1.5
TMEM248-204ENST00000424964 LCE1AQ5T7P2 110 aa5.61□□□□□ -1.51
TMEM248-204ENST00000424964 KRTAP23-1A1A580 65 aa5.6□□□□□ -1.51
TMEM248-204ENST00000424964 MDN1Q9NU22 5596 aa5.59□□□□□ -1.52
TMEM248-204ENST00000424964 A0A0A0MQY5 61 aa5.53□□□□□ -1.52
TMEM248-204ENST00000424964 KRTAP19-7Q3SYF9 63 aa5.53□□□□□ -1.52
TMEM248-204ENST00000424964 KRTAP20-1Q3LI63 56 aa5.52□□□□□ -1.53
TMEM248-204ENST00000424964 LCE3AQ5TA76 89 aa5.51□□□□□ -1.53
TMEM248-204ENST00000424964 KRTAP4-12Q9BQ66 201 aa5.5□□□□□ -1.53
TMEM248-204ENST00000424964 KRTAP19-5Q3LI72 72 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 116 ms