RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 BIRC6Q9NR09 4857 aa6□□□□□ -1.45
SEC61A1-202ENST00000424880 KRTAP13-4Q3LI77 160 aa6□□□□□ -1.45
SEC61A1-202ENST00000424880 A0A0A0MQY5 61 aa5.97□□□□□ -1.45
SEC61A1-202ENST00000424880 RPL37P61927 97 aaKnown RBP5.94□□□□□ -1.46
SEC61A1-202ENST00000424880 DYNC1H1Q14204 4646 aaKnown RBP5.94□□□□□ -1.46
SEC61A1-202ENST00000424880 A0A1B0GVY2 172 aa5.91□□□□□ -1.46
SEC61A1-202ENST00000424880 SMR3BP02814 79 aaPredicted RBP5.9□□□□□ -1.46
SEC61A1-202ENST00000424880 FAT1Q14517 4588 aa5.9□□□□□ -1.47
SEC61A1-202ENST00000424880 KRTAP10-6P60371 365 aaPredicted RBP5.88□□□□□ -1.47
SEC61A1-202ENST00000424880 APOBP04114 4563 aaKnown RBP5.87□□□□□ -1.47
SEC61A1-202ENST00000424880 MYCBP2O75592 4640 aa5.86□□□□□ -1.47
SEC61A1-202ENST00000424880 EPPK1P58107 5090 aaKnown RBP5.85□□□□□ -1.47
SEC61A1-202ENST00000424880 KRTAP12-2P59991 146 aa5.83□□□□□ -1.48
SEC61A1-202ENST00000424880 HERC2O95714 4834 aa5.82□□□□□ -1.48
SEC61A1-202ENST00000424880 KRTAP3-3Q9BYR6 98 aa5.8□□□□□ -1.48
SEC61A1-202ENST00000424880 S4R3F8 94 aa5.78□□□□□ -1.48
SEC61A1-202ENST00000424880 KRTAP3-2Q9BYR7 98 aa5.78□□□□□ -1.48
SEC61A1-202ENST00000424880 KRTAP10-4P60372 401 aaPredicted RBP5.77□□□□□ -1.49
SEC61A1-202ENST00000424880 HSPG2P98160 4391 aa5.77□□□□□ -1.49
SEC61A1-202ENST00000424880 RPS29P62273 56 aaKnown RBP5.75□□□□□ -1.49
SEC61A1-202ENST00000424880 KRTAP10-8P60410 259 aa5.74□□□□□ -1.49
SEC61A1-202ENST00000424880 LPAP08519 4548 aa5.72□□□□□ -1.49
SEC61A1-202ENST00000424880 LRP1Q07954 4544 aaKnown RBP5.7□□□□□ -1.5
SEC61A1-202ENST00000424880 PKHD1L1Q86WI1 4243 aa5.7□□□□□ -1.5
SEC61A1-202ENST00000424880 KIAA1109Q2LD37 5005 aa5.68□□□□□ -1.5
SEC61A1-202ENST00000424880 LUZP6Q538Z0 58 aa5.68□□□□□ -1.5
SEC61A1-202ENST00000424880 XP32Q5T750 250 aa5.67□□□□□ -1.5
SEC61A1-202ENST00000424880 KRTAP12-1P59990 96 aa5.66□□□□□ -1.5
SEC61A1-202ENST00000424880 KRTAP17-1Q9BYP8 105 aa5.66□□□□□ -1.5
SEC61A1-202ENST00000424880 RYR1P21817 5038 aa5.65□□□□□ -1.5
SEC61A1-202ENST00000424880 TNXBP22105 4242 aa5.61□□□□□ -1.51
SEC61A1-202ENST00000424880 FAT3Q8TDW7 4589 aa5.58□□□□□ -1.52
SEC61A1-202ENST00000424880 Q5VSD8 79 aa5.57□□□□□ -1.52
SEC61A1-202ENST00000424880 KRTAP4-5Q9BYR2 181 aa5.55□□□□□ -1.52
SEC61A1-202ENST00000424880 PCLOQ9Y6V0 5065 aa5.51□□□□□ -1.53
SEC61A1-202ENST00000424880 PLAC4Q8WY50 150 aa5.49□□□□□ -1.53
SEC61A1-202ENST00000424880 LRP2P98164 4655 aa5.48□□□□□ -1.53
SEC61A1-202ENST00000424880 ABCA13Q86UQ4 5058 aa5.46□□□□□ -1.53
SEC61A1-202ENST00000424880 M0QZ58 72 aa5.44□□□□□ -1.54
SEC61A1-202ENST00000424880 MT1HL1P0DM35 61 aa5.42□□□□□ -1.54
SEC61A1-202ENST00000424880 R4GN34 69 aa5.37□□□□□ -1.55
SEC61A1-202ENST00000424880 LORP23490 312 aaPredicted RBP5.35□□□□□ -1.55
SEC61A1-202ENST00000424880 SEC61BP60468 96 aaKnown RBP5.35□□□□□ -1.55
SEC61A1-202ENST00000424880 J3QL48 77 aa5.34□□□□□ -1.55
SEC61A1-202ENST00000424880 HERC1Q15751 4861 aa5.22□□□□□ -1.57
SEC61A1-202ENST00000424880 MUC2Q02817 5179 aa5.21□□□□□ -1.58
SEC61A1-202ENST00000424880 PP632Q6XCG6 107 aa5.21□□□□□ -1.58
SEC61A1-202ENST00000424880 CAMK2N1Q7Z7J9 78 aa5.19□□□□□ -1.58
SEC61A1-202ENST00000424880 HMCN2Q8NDA2 5059 aa5.12□□□□□ -1.59
SEC61A1-202ENST00000424880 SPRR5A0A1B0GTR4 108 aa5.12□□□□□ -1.59
SEC61A1-202ENST00000424880 PRO2289Q9P1D8 64 aa5.05□□□□□ -1.6
SEC61A1-202ENST00000424880 MUC17Q685J3 4493 aa5.03□□□□□ -1.6
SEC61A1-202ENST00000424880 KRTAP4-1Q9BYQ7 146 aa5.01□□□□□ -1.61
SEC61A1-202ENST00000424880 KRTAP23-1A1A580 65 aa4.97□□□□□ -1.61
SEC61A1-202ENST00000424880 UBR4Q5T4S7 5183 aa4.9□□□□□ -1.62
SEC61A1-202ENST00000424880 TNP1P09430 55 aa4.9□□□□□ -1.62
SEC61A1-202ENST00000424880 INE1O15225 51 aa4.89□□□□□ -1.63
SEC61A1-202ENST00000424880 KRTAP19-2Q3LHN2 52 aa4.89□□□□□ -1.63
SEC61A1-202ENST00000424880 LCE2DQ5TA82 110 aaPredicted RBP4.88□□□□□ -1.63
SEC61A1-202ENST00000424880 FAT4Q6V0I7 4981 aa4.87□□□□□ -1.63
SEC61A1-202ENST00000424880 RNF213Q63HN8 5207 aa4.8□□□□□ -1.64
SEC61A1-202ENST00000424880 FLGP20930 4061 aaPredicted RBP4.76□□□□□ -1.65
SEC61A1-202ENST00000424880 LCE2AQ5TA79 106 aaPredicted RBP4.72□□□□□ -1.65
SEC61A1-202ENST00000424880 LCE3AQ5TA76 89 aa4.71□□□□□ -1.66
SEC61A1-202ENST00000424880 LCE2CQ5TA81 110 aa4.68□□□□□ -1.66
SEC61A1-202ENST00000424880 MT1HP80294 61 aa4.55□□□□□ -1.68
SEC61A1-202ENST00000424880 FSIP2Q5CZC0 6907 aa4.53□□□□□ -1.68
SEC61A1-202ENST00000424880 KRTAP9-2Q9BYQ4 174 aa4.52□□□□□ -1.69
SEC61A1-202ENST00000424880 KRTAP19-1Q8IUB9 90 aa4.5□□□□□ -1.69
SEC61A1-202ENST00000424880 M0R2T5 61 aa4.48□□□□□ -1.69
SEC61A1-202ENST00000424880 KMT2DO14686 5537 aa4.46□□□□□ -1.69
SEC61A1-202ENST00000424880 KRTAP8-1Q8IUC2 63 aa4.44□□□□□ -1.7
SEC61A1-202ENST00000424880 KRTAP9-8Q9BYQ0 159 aa4.43□□□□□ -1.7
SEC61A1-202ENST00000424880 KRTAP9-6A0A140TA67 174 aa4.42□□□□□ -1.7
SEC61A1-202ENST00000424880 SPRR2GQ9BYE4 73 aa4.42□□□□□ -1.7
SEC61A1-202ENST00000424880 MT1FP04733 61 aa4.42□□□□□ -1.7
SEC61A1-202ENST00000424880 MT2AP02795 61 aa4.41□□□□□ -1.7
SEC61A1-202ENST00000424880 KRTAP12-3P60328 96 aa4.4□□□□□ -1.71
SEC61A1-202ENST00000424880 KRTAP10-10P60014 251 aa4.37□□□□□ -1.71
SEC61A1-202ENST00000424880 KRTAP10-12P60413 245 aa4.36□□□□□ -1.71
SEC61A1-202ENST00000424880 USH2AO75445 5202 aa4.35□□□□□ -1.71
SEC61A1-202ENST00000424880 LCE2BO14633 110 aa4.31□□□□□ -1.72
SEC61A1-202ENST00000424880 KRTAP10-7P60409 375 aaPredicted RBP4.31□□□□□ -1.72
SEC61A1-202ENST00000424880 CRCT1Q9UGL9 99 aa4.29□□□□□ -1.72
SEC61A1-202ENST00000424880 KRTAP10-5P60370 271 aa4.29□□□□□ -1.72
SEC61A1-202ENST00000424880 MT1XP80297 61 aa4.27□□□□□ -1.73
SEC61A1-202ENST00000424880 KRTAP9-3Q9BYQ3 159 aa4.25□□□□□ -1.73
SEC61A1-202ENST00000424880 KRTAP19-8Q3LI54 63 aa4.22□□□□□ -1.73
SEC61A1-202ENST00000424880 MT1BP07438 61 aa4.21□□□□□ -1.73
SEC61A1-202ENST00000424880 KRTAP9-6A8MVA2 160 aa4.16□□□□□ -1.74
SEC61A1-202ENST00000424880 KRTAP19-5Q3LI72 72 aa4.15□□□□□ -1.75
SEC61A1-202ENST00000424880 KRTAP4-7Q9BYR0 210 aa4.14□□□□□ -1.75
SEC61A1-202ENST00000424880 LCE3CQ5T5A8 94 aa4.12□□□□□ -1.75
SEC61A1-202ENST00000424880 KRTAP4-8A0A0G2JLE6 195 aa4.08□□□□□ -1.76
SEC61A1-202ENST00000424880 KRTAP4-8Q9BYQ9 185 aa4.08□□□□□ -1.76
SEC61A1-202ENST00000424880 KRTAP2-3P0C7H8 128 aa4.06□□□□□ -1.76
SEC61A1-202ENST00000424880 KRTAP2-4Q9BYR9 128 aa4.06□□□□□ -1.76
SEC61A1-202ENST00000424880 KRTAP2-1Q9BYU5 128 aa4.06□□□□□ -1.76
SEC61A1-202ENST00000424880 OBSCNQ5VST9 7968 aa4.04□□□□□ -1.76
SEC61A1-202ENST00000424880 KRTAP19-6Q3LI70 58 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 127.3 ms