RNA–Protein interactions for RNA: ENST00000424766.5

PMS1-211, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 3

Gene PMS1, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-211ENST00000424766 KRTAP10-10P60014 251 aa9.75□□□□□ -0.85
PMS1-211ENST00000424766 LCE2BO14633 110 aa9.74□□□□□ -0.85
PMS1-211ENST00000424766 SNURFQ9Y675 71 aa9.73□□□□□ -0.85
PMS1-211ENST00000424766 C20orf197Q8N268 126 aa9.72□□□□□ -0.85
PMS1-211ENST00000424766 DMAC1Q96GE9 116 aa9.72□□□□□ -0.85
PMS1-211ENST00000424766 NDUFC1O43677 76 aa9.68□□□□□ -0.86
PMS1-211ENST00000424766 COX7CP15954 63 aa9.68□□□□□ -0.86
PMS1-211ENST00000424766 KRTAP9-3Q9BYQ3 159 aa9.63□□□□□ -0.87
PMS1-211ENST00000424766 ACYP2P14621 99 aa9.6□□□□□ -0.87
PMS1-211ENST00000424766 SPANXA2-OT1Q8N9U9 137 aa9.59□□□□□ -0.87
PMS1-211ENST00000424766 ANAPC13Q9BS18 74 aa9.56□□□□□ -0.88
PMS1-211ENST00000424766 H0YAA0 97 aa9.49□□□□□ -0.89
PMS1-211ENST00000424766 H7BZZ5 65 aa9.41□□□□□ -0.9
PMS1-211ENST00000424766 SPTSSBQ8NFR3 76 aa9.4□□□□□ -0.9
PMS1-211ENST00000424766 CHKB-CPT1BH3BT56 60 aa9.39□□□□□ -0.91
PMS1-211ENST00000424766 CYSTM1Q9H1C7 97 aa9.39□□□□□ -0.91
PMS1-211ENST00000424766 CRCT1Q9UGL9 99 aa9.39□□□□□ -0.91
PMS1-211ENST00000424766 ADM2Q7Z4H4 148 aa9.36□□□□□ -0.91
PMS1-211ENST00000424766 KRTAP9-6A0A140TA67 174 aa9.35□□□□□ -0.91
PMS1-211ENST00000424766 CRIPTQ9P021 101 aa9.35□□□□□ -0.91
PMS1-211ENST00000424766 CCDC179H3BU77 68 aa9.33□□□□□ -0.92
PMS1-211ENST00000424766 KRTAP19-1Q8IUB9 90 aa9.33□□□□□ -0.92
PMS1-211ENST00000424766 SPRR2GQ9BYE4 73 aa9.31□□□□□ -0.92
PMS1-211ENST00000424766 COA5Q86WW8 74 aa9.26□□□□□ -0.93
PMS1-211ENST00000424766 P0C880 135 aa9.2□□□□□ -0.94
PMS1-211ENST00000424766 USH2AO75445 5202 aa9.19□□□□□ -0.94
PMS1-211ENST00000424766 KRTAP19-8Q3LI54 63 aa9.18□□□□□ -0.94
PMS1-211ENST00000424766 FSIP2Q5CZC0 6907 aa9.17□□□□□ -0.94
PMS1-211ENST00000424766 ATP5EP56381 51 aaPredicted RBP9.12□□□□□ -0.95
PMS1-211ENST00000424766 Q5VV11 94 aa9.12□□□□□ -0.95
PMS1-211ENST00000424766 R4GN34 69 aa9.1□□□□□ -0.95
PMS1-211ENST00000424766 LOC100996750A0A140TA64 210 aa9.09□□□□□ -0.95
PMS1-211ENST00000424766 MT1BP07438 61 aa9.09□□□□□ -0.95
PMS1-211ENST00000424766 KRTAP4-6Q9BYQ5 205 aa9.09□□□□□ -0.95
PMS1-211ENST00000424766 KRTAP19-6Q3LI70 58 aa9.08□□□□□ -0.96
PMS1-211ENST00000424766 M0QZ58 72 aa9.03□□□□□ -0.96
PMS1-211ENST00000424766 TMEM258P61165 79 aa9.03□□□□□ -0.96
PMS1-211ENST00000424766 SSPOA2VEC9 5147 aa8.99□□□□□ -0.97
PMS1-211ENST00000424766 SEC61GP60059 68 aa8.95□□□□□ -0.98
PMS1-211ENST00000424766 SERP1Q9Y6X1 66 aa8.93□□□□□ -0.98
PMS1-211ENST00000424766 LINC01554Q52M75 96 aa8.85□□□□□ -0.99
PMS1-211ENST00000424766 PLAC4Q8WY50 150 aa8.85□□□□□ -0.99
PMS1-211ENST00000424766 FCGBPQ9Y6R7 5405 aaPredicted RBP8.82□□□□□ -1
PMS1-211ENST00000424766 A6NN06 94 aa8.81□□□□□ -1
PMS1-211ENST00000424766 KRTAP10-5P60370 271 aa8.8□□□□□ -1
PMS1-211ENST00000424766 A0A1B0GU69 56 aa8.79□□□□□ -1
PMS1-211ENST00000424766 KRTAP13-4Q3LI77 160 aa8.77□□□□□ -1.01
PMS1-211ENST00000424766 A0A1B0GU33 70 aa8.75□□□□□ -1.01
PMS1-211ENST00000424766 PCP4P48539 62 aa8.75□□□□□ -1.01
PMS1-211ENST00000424766 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.71□□□□□ -1.02
PMS1-211ENST00000424766 LINC01558Q9Y6Z2 57 aa8.7□□□□□ -1.02
PMS1-211ENST00000424766 PRR15LQ9BU68 103 aa8.67□□□□□ -1.02
PMS1-211ENST00000424766 PRO2289Q9P1D8 64 aa8.67□□□□□ -1.02
PMS1-211ENST00000424766 MT1XP80297 61 aa8.63□□□□□ -1.03
PMS1-211ENST00000424766 SPATA8Q6RVD6 105 aa8.63□□□□□ -1.03
PMS1-211ENST00000424766 A0A0D9SG42 100 aa8.54□□□□□ -1.04
PMS1-211ENST00000424766 SMIM26A0A096LP01 95 aa8.52□□□□□ -1.05
PMS1-211ENST00000424766 V9GYY9 64 aa8.49□□□□□ -1.05
PMS1-211ENST00000424766 KRTAP9-7A8MTY7 169 aa8.47□□□□□ -1.05
PMS1-211ENST00000424766 RPS28P62857 69 aaKnown RBP8.45□□□□□ -1.06
PMS1-211ENST00000424766 Q1T7F1 81 aa8.44□□□□□ -1.06
PMS1-211ENST00000424766 KRTAP12-1P59990 96 aa8.42□□□□□ -1.06
PMS1-211ENST00000424766 CAMK2N1Q7Z7J9 78 aa8.42□□□□□ -1.06
PMS1-211ENST00000424766 SPINT4Q6UDR6 99 aa8.41□□□□□ -1.06
PMS1-211ENST00000424766 UQCR11O14957 56 aa8.4□□□□□ -1.06
PMS1-211ENST00000424766 A8MU10 97 aa8.39□□□□□ -1.07
PMS1-211ENST00000424766 KRTAP12-2P59991 146 aa8.36□□□□□ -1.07
PMS1-211ENST00000424766 MACF1Q9UPN3 7388 aaKnown RBP8.33□□□□□ -1.08
PMS1-211ENST00000424766 KRTAP6-3Q3LI67 103 aa8.33□□□□□ -1.08
PMS1-211ENST00000424766 PSPHP1O15172 72 aa8.31□□□□□ -1.08
PMS1-211ENST00000424766 MIR22HGQ0VDD5 57 aa8.24□□□□□ -1.09
PMS1-211ENST00000424766 KRTAP10-7P60409 375 aaPredicted RBP8.23□□□□□ -1.09
PMS1-211ENST00000424766 KRTAP10-12P60413 245 aa8.22□□□□□ -1.09
PMS1-211ENST00000424766 KRTAP4-8Q9BYQ9 185 aa8.21□□□□□ -1.1
PMS1-211ENST00000424766 KRTAP5-9P26371 169 aa8.13□□□□□ -1.11
PMS1-211ENST00000424766 SYNE2Q8WXH0 6885 aaKnown RBP8.11□□□□□ -1.11
PMS1-211ENST00000424766 KRTAP4-8A0A0G2JLE6 195 aa8.1□□□□□ -1.11
PMS1-211ENST00000424766 KRTAP8-1Q8IUC2 63 aa8.1□□□□□ -1.11
PMS1-211ENST00000424766 A6NED7 52 aa8.07□□□□□ -1.12
PMS1-211ENST00000424766 K7ERS5 55 aa8.01□□□□□ -1.13
PMS1-211ENST00000424766 C10orf95Q9H7T3 257 aa8.01□□□□□ -1.13
PMS1-211ENST00000424766 KMT2DO14686 5537 aa7.97□□□□□ -1.13
PMS1-211ENST00000424766 SPRR2FQ96RM1 72 aa7.97□□□□□ -1.13
PMS1-211ENST00000424766 TNP1P09430 55 aa7.91□□□□□ -1.14
PMS1-211ENST00000424766 CDC42SE1Q9NRR8 79 aa7.83□□□□□ -1.16
PMS1-211ENST00000424766 LCE3BQ5TA77 95 aa7.78□□□□□ -1.16
PMS1-211ENST00000424766 SPRR2EP22531 72 aa7.75□□□□□ -1.17
PMS1-211ENST00000424766 SPRR2BP35325 72 aa7.75□□□□□ -1.17
PMS1-211ENST00000424766 SPRR2AP35326 72 aa7.75□□□□□ -1.17
PMS1-211ENST00000424766 KRTAP4-12Q9BQ66 201 aa7.73□□□□□ -1.17
PMS1-211ENST00000424766 MUC12Q9UKN1 5478 aa7.73□□□□□ -1.17
PMS1-211ENST00000424766 LCE1AQ5T7P2 110 aa7.72□□□□□ -1.17
PMS1-211ENST00000424766 KRTAP19-7Q3SYF9 63 aa7.71□□□□□ -1.18
PMS1-211ENST00000424766 KRTAP25-1Q3LHN0 102 aa7.7□□□□□ -1.18
PMS1-211ENST00000424766 KRTAP9-9Q9BYP9 154 aa7.69□□□□□ -1.18
PMS1-211ENST00000424766 KRTAP9-4Q9BYQ2 154 aa7.69□□□□□ -1.18
PMS1-211ENST00000424766 LCE3AQ5TA76 89 aa7.68□□□□□ -1.18
PMS1-211ENST00000424766 KRTAP19-5Q3LI72 72 aa7.63□□□□□ -1.19
PMS1-211ENST00000424766 NEBP20929 6669 aa7.62□□□□□ -1.19
PMS1-211ENST00000424766 MT1EP04732 61 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 112.8 ms