RNA–Protein interactions for RNA: ENST00000424747.1

SLC52A1-202, Transcript of solute carrier family 52 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC52A1, Length 2,412 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1-202ENST00000424747 RYR1P21817 5038 aa8.9□□□□□ -0.98
SLC52A1-202ENST00000424747 H1FX-AS1Q4G0G2 97 aa8.9□□□□□ -0.98
SLC52A1-202ENST00000424747 LINC01554Q52M75 96 aa8.86□□□□□ -0.99
SLC52A1-202ENST00000424747 CSAG1Q6PB30 78 aa8.86□□□□□ -0.99
SLC52A1-202ENST00000424747 DMBT1Q9UGM3 2413 aaPredicted RBP8.84□□□□□ -0.99
SLC52A1-202ENST00000424747 KIAA1109Q2LD37 5005 aa8.81□□□□□ -1
SLC52A1-202ENST00000424747 MT1HL1P0DM35 61 aa8.75□□□□□ -1.01
SLC52A1-202ENST00000424747 RPL37P61927 97 aaKnown RBP8.73□□□□□ -1.01
SLC52A1-202ENST00000424747 MYCBP2O75592 4640 aa8.73□□□□□ -1.01
SLC52A1-202ENST00000424747 XP32Q5T750 250 aa8.72□□□□□ -1.01
SLC52A1-202ENST00000424747 KRTAP3-3Q9BYR6 98 aa8.7□□□□□ -1.02
SLC52A1-202ENST00000424747 EPPK1P58107 5090 aaKnown RBP8.68□□□□□ -1.02
SLC52A1-202ENST00000424747 K7ERS5 55 aa8.64□□□□□ -1.03
SLC52A1-202ENST00000424747 KRTAP10-6P60371 365 aaPredicted RBP8.64□□□□□ -1.03
SLC52A1-202ENST00000424747 KRTAP25-1Q3LHN0 102 aa8.63□□□□□ -1.03
SLC52A1-202ENST00000424747 S4R3F8 94 aa8.59□□□□□ -1.03
SLC52A1-202ENST00000424747 KRTAP3-2Q9BYR7 98 aa8.58□□□□□ -1.04
SLC52A1-202ENST00000424747 KRTAP13-4Q3LI77 160 aa8.55□□□□□ -1.04
SLC52A1-202ENST00000424747 KRTAP4-5Q9BYR2 181 aa8.53□□□□□ -1.04
SLC52A1-202ENST00000424747 ROMO1P60602 79 aa8.48□□□□□ -1.05
SLC52A1-202ENST00000424747 TPRXLQ17RH7 258 aa8.48□□□□□ -1.05
SLC52A1-202ENST00000424747 A0A0D9SG42 100 aa8.46□□□□□ -1.05
SLC52A1-202ENST00000424747 P0C880 135 aa8.45□□□□□ -1.06
SLC52A1-202ENST00000424747 CRIPTQ9P021 101 aa8.45□□□□□ -1.06
SLC52A1-202ENST00000424747 LRP2P98164 4655 aa8.42□□□□□ -1.06
SLC52A1-202ENST00000424747 ABCA13Q86UQ4 5058 aa8.39□□□□□ -1.07
SLC52A1-202ENST00000424747 LPAP08519 4548 aa8.39□□□□□ -1.07
SLC52A1-202ENST00000424747 KRTAP12-2P59991 146 aa8.28□□□□□ -1.08
SLC52A1-202ENST00000424747 J3QL48 77 aa8.28□□□□□ -1.08
SLC52A1-202ENST00000424747 KRTAP12-1P59990 96 aa8.23□□□□□ -1.09
SLC52A1-202ENST00000424747 LOC100996750A0A140TA64 210 aa8.19□□□□□ -1.1
SLC52A1-202ENST00000424747 M0QZ58 72 aa8.19□□□□□ -1.1
SLC52A1-202ENST00000424747 KRTAP4-6Q9BYQ5 205 aa8.19□□□□□ -1.1
SLC52A1-202ENST00000424747 HERC2O95714 4834 aa8.19□□□□□ -1.1
SLC52A1-202ENST00000424747 SEC61BP60468 96 aaKnown RBP8.19□□□□□ -1.1
SLC52A1-202ENST00000424747 SPINT4Q6UDR6 99 aa8.18□□□□□ -1.1
SLC52A1-202ENST00000424747 C10orf95Q9H7T3 257 aa8.17□□□□□ -1.1
SLC52A1-202ENST00000424747 H3BS24 57 aa8.1□□□□□ -1.11
SLC52A1-202ENST00000424747 KRTAP4-1Q9BYQ7 146 aa8.08□□□□□ -1.12
SLC52A1-202ENST00000424747 MUC17Q685J3 4493 aa8.07□□□□□ -1.12
SLC52A1-202ENST00000424747 BIRC6Q9NR09 4857 aa8.07□□□□□ -1.12
SLC52A1-202ENST00000424747 R4GN34 69 aa7.96□□□□□ -1.14
SLC52A1-202ENST00000424747 KRTAP15-1Q3LI76 137 aa7.89□□□□□ -1.15
SLC52A1-202ENST00000424747 KRTAP19-2Q3LHN2 52 aa7.88□□□□□ -1.15
SLC52A1-202ENST00000424747 LORP23490 312 aaPredicted RBP7.87□□□□□ -1.15
SLC52A1-202ENST00000424747 PCLOQ9Y6V0 5065 aa7.8□□□□□ -1.16
SLC52A1-202ENST00000424747 MUC2Q02817 5179 aa7.79□□□□□ -1.16
SLC52A1-202ENST00000424747 HERC1Q15751 4861 aa7.79□□□□□ -1.16
SLC52A1-202ENST00000424747 HMCN2Q8NDA2 5059 aa7.72□□□□□ -1.17
SLC52A1-202ENST00000424747 NDUFAF8A1L188 74 aa7.68□□□□□ -1.18
SLC52A1-202ENST00000424747 FLGP20930 4061 aaPredicted RBP7.66□□□□□ -1.18
SLC52A1-202ENST00000424747 CAMK2N1Q7Z7J9 78 aa7.56□□□□□ -1.2
SLC52A1-202ENST00000424747 LCE2CQ5TA81 110 aa7.52□□□□□ -1.21
SLC52A1-202ENST00000424747 PLAC4Q8WY50 150 aa7.51□□□□□ -1.21
SLC52A1-202ENST00000424747 PP632Q6XCG6 107 aa7.49□□□□□ -1.21
SLC52A1-202ENST00000424747 FAT4Q6V0I7 4981 aa7.44□□□□□ -1.22
SLC52A1-202ENST00000424747 RNF213Q63HN8 5207 aa7.38□□□□□ -1.23
SLC52A1-202ENST00000424747 UBR4Q5T4S7 5183 aa7.38□□□□□ -1.23
SLC52A1-202ENST00000424747 M0R2T5 61 aa7.37□□□□□ -1.23
SLC52A1-202ENST00000424747 MT1HP80294 61 aa7.33□□□□□ -1.24
SLC52A1-202ENST00000424747 TNP1P09430 55 aa7.3□□□□□ -1.24
SLC52A1-202ENST00000424747 KRTAP23-1A1A580 65 aa7.26□□□□□ -1.25
SLC52A1-202ENST00000424747 SPRR2GQ9BYE4 73 aa7.21□□□□□ -1.25
SLC52A1-202ENST00000424747 KRTAP19-1Q8IUB9 90 aa7.19□□□□□ -1.26
SLC52A1-202ENST00000424747 MT2AP02795 61 aa7.16□□□□□ -1.26
SLC52A1-202ENST00000424747 KRTAP10-10P60014 251 aa7.16□□□□□ -1.26
SLC52A1-202ENST00000424747 KRTAP4-8Q9BYQ9 185 aa7.16□□□□□ -1.26
SLC52A1-202ENST00000424747 MT1FP04733 61 aa7.16□□□□□ -1.26
SLC52A1-202ENST00000424747 LUZP6Q538Z0 58 aa7.16□□□□□ -1.26
SLC52A1-202ENST00000424747 LCE2BO14633 110 aa7.13□□□□□ -1.27
SLC52A1-202ENST00000424747 KRTAP9-8Q9BYQ0 159 aa7.13□□□□□ -1.27
SLC52A1-202ENST00000424747 SPRR5A0A1B0GTR4 108 aa7.03□□□□□ -1.28
SLC52A1-202ENST00000424747 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.97□□□□□ -1.29
SLC52A1-202ENST00000424747 KRTAP9-2Q9BYQ4 174 aa6.96□□□□□ -1.3
SLC52A1-202ENST00000424747 LCE2AQ5TA79 106 aaPredicted RBP6.94□□□□□ -1.3
SLC52A1-202ENST00000424747 KRTAP9-6A0A140TA67 174 aa6.93□□□□□ -1.3
SLC52A1-202ENST00000424747 KRTAP19-8Q3LI54 63 aa6.93□□□□□ -1.3
SLC52A1-202ENST00000424747 LCE3AQ5TA76 89 aa6.92□□□□□ -1.3
SLC52A1-202ENST00000424747 MT1BP07438 61 aa6.86□□□□□ -1.31
SLC52A1-202ENST00000424747 KRTAP9-3Q9BYQ3 159 aa6.85□□□□□ -1.31
SLC52A1-202ENST00000424747 A0A0A0MQY5 61 aa6.84□□□□□ -1.32
SLC52A1-202ENST00000424747 KRTAP10-5P60370 271 aa6.76□□□□□ -1.33
SLC52A1-202ENST00000424747 KRTAP8-1Q8IUC2 63 aa6.76□□□□□ -1.33
SLC52A1-202ENST00000424747 KRTAP4-8A0A0G2JLE6 195 aa6.76□□□□□ -1.33
SLC52A1-202ENST00000424747 MT1XP80297 61 aa6.75□□□□□ -1.33
SLC52A1-202ENST00000424747 LCE3BQ5TA77 95 aa6.72□□□□□ -1.33
SLC52A1-202ENST00000424747 KRTAP10-12P60413 245 aa6.62□□□□□ -1.35
SLC52A1-202ENST00000424747 KRTAP9-9Q9BYP9 154 aa6.6□□□□□ -1.35
SLC52A1-202ENST00000424747 KRTAP9-4Q9BYQ2 154 aa6.6□□□□□ -1.35
SLC52A1-202ENST00000424747 KRTAP4-7Q9BYR0 210 aa6.6□□□□□ -1.35
SLC52A1-202ENST00000424747 KRTAP12-3P60328 96 aa6.58□□□□□ -1.36
SLC52A1-202ENST00000424747 PRO2289Q9P1D8 64 aa6.56□□□□□ -1.36
SLC52A1-202ENST00000424747 KRTAP10-7P60409 375 aaPredicted RBP6.55□□□□□ -1.36
SLC52A1-202ENST00000424747 KRTAP4-12Q9BQ66 201 aa6.49□□□□□ -1.37
SLC52A1-202ENST00000424747 USH2AO75445 5202 aa6.44□□□□□ -1.38
SLC52A1-202ENST00000424747 LCE1DQ5T752 114 aa6.33□□□□□ -1.4
SLC52A1-202ENST00000424747 KRTAP19-5Q3LI72 72 aa6.29□□□□□ -1.4
SLC52A1-202ENST00000424747 KRTAP4-2Q9BYR5 136 aa6.28□□□□□ -1.4
SLC52A1-202ENST00000424747 KRTAP4-9Q9BYQ8 210 aa6.27□□□□□ -1.41
SLC52A1-202ENST00000424747 KRTAP5-3Q6L8H2 238 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 214.7 ms