RNA–Protein interactions for RNA: ENST00000424643.3

SDCBPP2-201, Transcript of syndecan binding protein pseudogene 2, humanhuman

BASIC

Gene SDCBPP2, Length 885 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP2-201ENST00000424643 HIST1H4AP62805 103 aaKnown RBP2.06□□□□□ -2.08
SDCBPP2-201ENST00000424643 SPINK1P00995 79 aa2.05□□□□□ -2.08
SDCBPP2-201ENST00000424643 C1orf195Q5TG92 126 aa2.05□□□□□ -2.08
SDCBPP2-201ENST00000424643 ATP5EP2Q5VTU8 51 aa2.05□□□□□ -2.08
SDCBPP2-201ENST00000424643 VPS25Q9BRG1 176 aa2.05□□□□□ -2.08
SDCBPP2-201ENST00000424643 UBL5Q9BZL1 73 aa2.05□□□□□ -2.08
SDCBPP2-201ENST00000424643 NREPQ16612 68 aa2.04□□□□□ -2.08
SDCBPP2-201ENST00000424643 C9orf153Q5TBE3 101 aa2.04□□□□□ -2.08
SDCBPP2-201ENST00000424643 SPAG11AQ6PDA7 123 aa2.04□□□□□ -2.08
SDCBPP2-201ENST00000424643 FLG2Q5D862 2391 aaPredicted RBP2.03□□□□□ -2.08
SDCBPP2-201ENST00000424643 IGKV3D-7A0A0C4DH55 119 aa2.03□□□□□ -2.08
SDCBPP2-201ENST00000424643 SCGB1A1P11684 91 aa2.03□□□□□ -2.08
SDCBPP2-201ENST00000424643 PRR15Q8IV56 129 aa2.03□□□□□ -2.08
SDCBPP2-201ENST00000424643 A0A087WVE0 104 aa2.02□□□□□ -2.09
SDCBPP2-201ENST00000424643 J3KT08 172 aa2.02□□□□□ -2.09
SDCBPP2-201ENST00000424643 K7EQZ3 153 aa2.02□□□□□ -2.09
SDCBPP2-201ENST00000424643 HRCT1Q6UXD1 115 aa2.02□□□□□ -2.09
SDCBPP2-201ENST00000424643 SS18L2Q9UHA2 77 aa2.02□□□□□ -2.09
SDCBPP2-201ENST00000424643 MMP24-AS1A0A0U1RRL7 71 aa2.01□□□□□ -2.09
SDCBPP2-201ENST00000424643 MYCBP2O75592 4640 aa2□□□□□ -2.09
SDCBPP2-201ENST00000424643 HERC1Q15751 4861 aa2□□□□□ -2.09
SDCBPP2-201ENST00000424643 LIMD2Q9BT23 127 aa2□□□□□ -2.09
SDCBPP2-201ENST00000424643 FAM236AA0A1B0GUQ0 79 aa1.98□□□□□ -2.09
SDCBPP2-201ENST00000424643 FAM236BA0A1B0GV22 79 aa1.98□□□□□ -2.09
SDCBPP2-201ENST00000424643 HCG22E2RYF7 251 aa1.98□□□□□ -2.09
SDCBPP2-201ENST00000424643 NDUFB1O75438 58 aa1.97□□□□□ -2.09
SDCBPP2-201ENST00000424643 FP248Q71RG6 208 aaPredicted RBP1.97□□□□□ -2.09
SDCBPP2-201ENST00000424643 TMEM254Q8TBM7 123 aa1.97□□□□□ -2.09
SDCBPP2-201ENST00000424643 C20orf166-AS1Q96NR2 134 aa1.97□□□□□ -2.09
SDCBPP2-201ENST00000424643 TRAV7A0A075B6U4 112 aa1.96□□□□□ -2.1
SDCBPP2-201ENST00000424643 hDV103S1A0JD37 113 aa1.96□□□□□ -2.1
SDCBPP2-201ENST00000424643 ATOX1O00244 68 aa1.96□□□□□ -2.1
SDCBPP2-201ENST00000424643 CASC2Q6XLA1 102 aa1.96□□□□□ -2.1
SDCBPP2-201ENST00000424643 SERP2Q8N6R1 65 aa1.96□□□□□ -2.1
SDCBPP2-201ENST00000424643 ZCCHC13Q8WW36 166 aaKnown RBP1.96□□□□□ -2.1
SDCBPP2-201ENST00000424643 MRPL34Q9BQ48 92 aaKnown RBP1.96□□□□□ -2.1
SDCBPP2-201ENST00000424643 H3BPC8 53 aa1.95□□□□□ -2.1
SDCBPP2-201ENST00000424643 COX7CP15954 63 aa1.95□□□□□ -2.1
SDCBPP2-201ENST00000424643 SMIM20Q8N5G0 67 aa1.95□□□□□ -2.1
SDCBPP2-201ENST00000424643 RETNLBQ9BQ08 111 aa1.95□□□□□ -2.1
SDCBPP2-201ENST00000424643 KLKP1Q107X0 134 aa1.94□□□□□ -2.1
SDCBPP2-201ENST00000424643 PMAIP1Q13794 54 aa1.94□□□□□ -2.1
SDCBPP2-201ENST00000424643 TPRXLQ17RH7 258 aa1.94□□□□□ -2.1
SDCBPP2-201ENST00000424643 WFDC13Q8IUB5 93 aa1.94□□□□□ -2.1
SDCBPP2-201ENST00000424643 CYSTM1Q9H1C7 97 aa1.94□□□□□ -2.1
SDCBPP2-201ENST00000424643 LPAP08519 4548 aa1.93□□□□□ -2.1
SDCBPP2-201ENST00000424643 CCDC179H3BU77 68 aa1.93□□□□□ -2.1
SDCBPP2-201ENST00000424643 UQCRQO14949 82 aa1.93□□□□□ -2.1
SDCBPP2-201ENST00000424643 TP53AIP1Q9HCN2 124 aa1.93□□□□□ -2.1
SDCBPP2-201ENST00000424643 UBR4Q5T4S7 5183 aa1.91□□□□□ -2.1
SDCBPP2-201ENST00000424643 C9orf92A6NGG3 77 aa1.91□□□□□ -2.1
SDCBPP2-201ENST00000424643 A8MUN3 132 aa1.91□□□□□ -2.1
SDCBPP2-201ENST00000424643 H7BZZ5 65 aa1.91□□□□□ -2.1
SDCBPP2-201ENST00000424643 RPL37P61927 97 aaKnown RBP1.91□□□□□ -2.1
SDCBPP2-201ENST00000424643 LRP2P98164 4655 aa1.9□□□□□ -2.1
SDCBPP2-201ENST00000424643 MUC17Q685J3 4493 aa1.9□□□□□ -2.11
SDCBPP2-201ENST00000424643 TRAV22A0A0B4J277 110 aa1.9□□□□□ -2.11
SDCBPP2-201ENST00000424643 C20orf197Q8N268 126 aa1.9□□□□□ -2.11
SDCBPP2-201ENST00000424643 CYP4F30PQ9H0H9 118 aa1.9□□□□□ -2.11
SDCBPP2-201ENST00000424643 H0Y9P7 68 aa1.89□□□□□ -2.11
SDCBPP2-201ENST00000424643 RNF213Q63HN8 5207 aa1.89□□□□□ -2.11
SDCBPP2-201ENST00000424643 MUC19Q7Z5P9 8384 aa1.89□□□□□ -2.11
SDCBPP2-201ENST00000424643 LOC101927531A0A1B0GV80 90 aa1.88□□□□□ -2.11
SDCBPP2-201ENST00000424643 NDUFC1O43677 76 aa1.88□□□□□ -2.11
SDCBPP2-201ENST00000424643 KRTAP19-2Q3LHN2 52 aa1.88□□□□□ -2.11
SDCBPP2-201ENST00000424643 LINC00208Q96KT6 92 aa1.88□□□□□ -2.11
SDCBPP2-201ENST00000424643 SNURFQ9Y675 71 aa1.88□□□□□ -2.11
SDCBPP2-201ENST00000424643 KRTAP4-1Q9BYQ7 146 aa1.87□□□□□ -2.11
SDCBPP2-201ENST00000424643 HMCN2Q8NDA2 5059 aa1.87□□□□□ -2.11
SDCBPP2-201ENST00000424643 KRTAP5-7Q6L8G8 165 aa1.86□□□□□ -2.11
SDCBPP2-201ENST00000424643 SPINK7P58062 85 aa1.85□□□□□ -2.11
SDCBPP2-201ENST00000424643 TMEM258P61165 79 aa1.85□□□□□ -2.11
SDCBPP2-201ENST00000424643 PCOTHQ58A44 107 aa1.85□□□□□ -2.11
SDCBPP2-201ENST00000424643 ATP11AUNQ6ZP68 121 aa1.84□□□□□ -2.11
SDCBPP2-201ENST00000424643 C7orf65Q6ZTY9 151 aa1.84□□□□□ -2.11
SDCBPP2-201ENST00000424643 RPS28P62857 69 aaKnown RBP1.83□□□□□ -2.12
SDCBPP2-201ENST00000424643 DMAC1Q96GE9 116 aa1.83□□□□□ -2.12
SDCBPP2-201ENST00000424643 FAM236DA0A1B0GTK5 79 aa1.82□□□□□ -2.12
SDCBPP2-201ENST00000424643 FAM236CP0DP71 79 aa1.82□□□□□ -2.12
SDCBPP2-201ENST00000424643 ATP5EP56381 51 aaPredicted RBP1.82□□□□□ -2.12
SDCBPP2-201ENST00000424643 COX6B2Q6YFQ2 88 aa1.82□□□□□ -2.12
SDCBPP2-201ENST00000424643 PRO2289Q9P1D8 64 aa1.81□□□□□ -2.12
SDCBPP2-201ENST00000424643 KRTAP6-3Q3LI67 103 aa1.8□□□□□ -2.12
SDCBPP2-201ENST00000424643 MUC2Q02817 5179 aa1.8□□□□□ -2.12
SDCBPP2-201ENST00000424643 SERP1Q9Y6X1 66 aa1.79□□□□□ -2.12
SDCBPP2-201ENST00000424643 M0R2T5 61 aa1.78□□□□□ -2.12
SDCBPP2-201ENST00000424643 ACYP2P14621 99 aa1.78□□□□□ -2.12
SDCBPP2-201ENST00000424643 KTN1-AS1Q86SY8 53 aa1.78□□□□□ -2.12
SDCBPP2-201ENST00000424643 H1FX-AS1Q4G0G2 97 aa1.77□□□□□ -2.13
SDCBPP2-201ENST00000424643 COA5Q86WW8 74 aa1.77□□□□□ -2.13
SDCBPP2-201ENST00000424643 LCA10Q71F78 164 aa1.75□□□□□ -2.13
SDCBPP2-201ENST00000424643 FLGP20930 4061 aaPredicted RBP1.75□□□□□ -2.13
SDCBPP2-201ENST00000424643 Q1T7F1 81 aa1.74□□□□□ -2.13
SDCBPP2-201ENST00000424643 KRTAP12-3P60328 96 aa1.73□□□□□ -2.13
SDCBPP2-201ENST00000424643 MT1HP80294 61 aa1.73□□□□□ -2.13
SDCBPP2-201ENST00000424643 LINC01558Q9Y6Z2 57 aa1.73□□□□□ -2.13
SDCBPP2-201ENST00000424643 H0YAA0 97 aa1.72□□□□□ -2.13
SDCBPP2-201ENST00000424643 KRTAP12-1P59990 96 aa1.72□□□□□ -2.13
SDCBPP2-201ENST00000424643 FAT4Q6V0I7 4981 aa1.72□□□□□ -2.13
SDCBPP2-201ENST00000424643 S4R3F8 94 aa1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms