RNA–Protein interactions for RNA: ENST00000424443.7

TSPAN3-203, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-203ENST00000424443 SNURFQ9Y675 71 aa11.9□□□□□ -0.5
TSPAN3-203ENST00000424443 DMAC1Q96GE9 116 aa11.87□□□□□ -0.51
TSPAN3-203ENST00000424443 C20orf197Q8N268 126 aa11.86□□□□□ -0.51
TSPAN3-203ENST00000424443 KRTAP9-3Q9BYQ3 159 aa11.86□□□□□ -0.51
TSPAN3-203ENST00000424443 KRTAP9-6A0A140TA67 174 aa11.76□□□□□ -0.53
TSPAN3-203ENST00000424443 CRCT1Q9UGL9 99 aa11.75□□□□□ -0.53
TSPAN3-203ENST00000424443 ACYP2P14621 99 aa11.74□□□□□ -0.53
TSPAN3-203ENST00000424443 COX7CP15954 63 aa11.72□□□□□ -0.53
TSPAN3-203ENST00000424443 FSIP2Q5CZC0 6907 aa11.7□□□□□ -0.54
TSPAN3-203ENST00000424443 LCE2BO14633 110 aa11.7□□□□□ -0.54
TSPAN3-203ENST00000424443 SPANXA2-OT1Q8N9U9 137 aa11.65□□□□□ -0.54
TSPAN3-203ENST00000424443 H0YAA0 97 aa11.62□□□□□ -0.55
TSPAN3-203ENST00000424443 PCP4P48539 62 aa11.6□□□□□ -0.55
TSPAN3-203ENST00000424443 ANAPC13Q9BS18 74 aa11.6□□□□□ -0.55
TSPAN3-203ENST00000424443 CHKB-CPT1BH3BT56 60 aa11.56□□□□□ -0.56
TSPAN3-203ENST00000424443 ADM2Q7Z4H4 148 aa11.54□□□□□ -0.56
TSPAN3-203ENST00000424443 SPTSSBQ8NFR3 76 aa11.54□□□□□ -0.56
TSPAN3-203ENST00000424443 USH2AO75445 5202 aa11.52□□□□□ -0.57
TSPAN3-203ENST00000424443 CRIPTQ9P021 101 aa11.5□□□□□ -0.57
TSPAN3-203ENST00000424443 KRTAP19-1Q8IUB9 90 aa11.48□□□□□ -0.57
TSPAN3-203ENST00000424443 SPRR2GQ9BYE4 73 aa11.44□□□□□ -0.58
TSPAN3-203ENST00000424443 H7BZZ5 65 aa11.4□□□□□ -0.58
TSPAN3-203ENST00000424443 CYSTM1Q9H1C7 97 aa11.39□□□□□ -0.59
TSPAN3-203ENST00000424443 Q5VV11 94 aa11.31□□□□□ -0.6
TSPAN3-203ENST00000424443 COA5Q86WW8 74 aa11.31□□□□□ -0.6
TSPAN3-203ENST00000424443 CCDC179H3BU77 68 aa11.3□□□□□ -0.6
TSPAN3-203ENST00000424443 SSPOA2VEC9 5147 aa11.3□□□□□ -0.6
TSPAN3-203ENST00000424443 P0C880 135 aa11.3□□□□□ -0.6
TSPAN3-203ENST00000424443 KRTAP19-8Q3LI54 63 aa11.27□□□□□ -0.61
TSPAN3-203ENST00000424443 KRTAP3-2Q9BYR7 98 aa11.25□□□□□ -0.61
TSPAN3-203ENST00000424443 R4GN34 69 aa11.25□□□□□ -0.61
TSPAN3-203ENST00000424443 KRTAP19-6Q3LI70 58 aa11.23□□□□□ -0.61
TSPAN3-203ENST00000424443 MT1BP07438 61 aa11.19□□□□□ -0.62
TSPAN3-203ENST00000424443 M0QZ58 72 aa11.16□□□□□ -0.62
TSPAN3-203ENST00000424443 ATP5EP56381 51 aaPredicted RBP11.07□□□□□ -0.64
TSPAN3-203ENST00000424443 SEC61GP60059 68 aa11.02□□□□□ -0.65
TSPAN3-203ENST00000424443 FCGBPQ9Y6R7 5405 aaPredicted RBP11.01□□□□□ -0.65
TSPAN3-203ENST00000424443 LINC01554Q52M75 96 aa11□□□□□ -0.65
TSPAN3-203ENST00000424443 A6NN06 94 aa10.98□□□□□ -0.65
TSPAN3-203ENST00000424443 SERP1Q9Y6X1 66 aa10.97□□□□□ -0.65
TSPAN3-203ENST00000424443 PLAC4Q8WY50 150 aa10.96□□□□□ -0.65
TSPAN3-203ENST00000424443 TMEM258P61165 79 aa10.94□□□□□ -0.66
TSPAN3-203ENST00000424443 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.89□□□□□ -0.67
TSPAN3-203ENST00000424443 KRTAP10-5P60370 271 aa10.86□□□□□ -0.67
TSPAN3-203ENST00000424443 A0A1B0GU69 56 aa10.76□□□□□ -0.69
TSPAN3-203ENST00000424443 PRO2289Q9P1D8 64 aa10.75□□□□□ -0.69
TSPAN3-203ENST00000424443 KRTAP13-4Q3LI77 160 aa10.73□□□□□ -0.69
TSPAN3-203ENST00000424443 A0A1B0GU33 70 aa10.71□□□□□ -0.69
TSPAN3-203ENST00000424443 KRTAP9-7A8MTY7 169 aa10.63□□□□□ -0.71
TSPAN3-203ENST00000424443 MT1XP80297 61 aa10.62□□□□□ -0.71
TSPAN3-203ENST00000424443 PRR15LQ9BU68 103 aa10.62□□□□□ -0.71
TSPAN3-203ENST00000424443 SPATA8Q6RVD6 105 aa10.59□□□□□ -0.71
TSPAN3-203ENST00000424443 MACF1Q9UPN3 7388 aaKnown RBP10.59□□□□□ -0.71
TSPAN3-203ENST00000424443 A0A0D9SG42 100 aa10.55□□□□□ -0.72
TSPAN3-203ENST00000424443 LINC01558Q9Y6Z2 57 aa10.54□□□□□ -0.72
TSPAN3-203ENST00000424443 CAMK2N1Q7Z7J9 78 aa10.44□□□□□ -0.74
TSPAN3-203ENST00000424443 SMIM26A0A096LP01 95 aa10.43□□□□□ -0.74
TSPAN3-203ENST00000424443 SYNE2Q8WXH0 6885 aaKnown RBP10.4□□□□□ -0.75
TSPAN3-203ENST00000424443 SPINT4Q6UDR6 99 aa10.38□□□□□ -0.75
TSPAN3-203ENST00000424443 KRTAP6-3Q3LI67 103 aa10.36□□□□□ -0.75
TSPAN3-203ENST00000424443 V9GYY9 64 aa10.3□□□□□ -0.76
TSPAN3-203ENST00000424443 A8MU10 97 aa10.28□□□□□ -0.76
TSPAN3-203ENST00000424443 KRTAP12-1P59990 96 aa10.28□□□□□ -0.76
TSPAN3-203ENST00000424443 KRTAP12-2P59991 146 aa10.28□□□□□ -0.76
TSPAN3-203ENST00000424443 RPS28P62857 69 aaKnown RBP10.28□□□□□ -0.76
TSPAN3-203ENST00000424443 UQCR11O14957 56 aa10.25□□□□□ -0.77
TSPAN3-203ENST00000424443 Q1T7F1 81 aa10.19□□□□□ -0.78
TSPAN3-203ENST00000424443 KRTAP10-7P60409 375 aaPredicted RBP10.16□□□□□ -0.78
TSPAN3-203ENST00000424443 PSPHP1O15172 72 aa10.13□□□□□ -0.79
TSPAN3-203ENST00000424443 KRTAP10-12P60413 245 aa10.1□□□□□ -0.79
TSPAN3-203ENST00000424443 KRTAP8-1Q8IUC2 63 aa10.08□□□□□ -0.8
TSPAN3-203ENST00000424443 KRTAP5-9P26371 169 aa10.06□□□□□ -0.8
TSPAN3-203ENST00000424443 MIR22HGQ0VDD5 57 aa10.05□□□□□ -0.8
TSPAN3-203ENST00000424443 KMT2DO14686 5537 aa10.04□□□□□ -0.8
TSPAN3-203ENST00000424443 KRTAP4-8A0A0G2JLE6 195 aa10.02□□□□□ -0.81
TSPAN3-203ENST00000424443 KRTAP4-8Q9BYQ9 185 aa10.02□□□□□ -0.81
TSPAN3-203ENST00000424443 SPRR2FQ96RM1 72 aa9.95□□□□□ -0.82
TSPAN3-203ENST00000424443 A6NED7 52 aa9.86□□□□□ -0.83
TSPAN3-203ENST00000424443 K7ERS5 55 aa9.84□□□□□ -0.83
TSPAN3-203ENST00000424443 MUC12Q9UKN1 5478 aa9.8□□□□□ -0.84
TSPAN3-203ENST00000424443 C10orf95Q9H7T3 257 aa9.77□□□□□ -0.84
TSPAN3-203ENST00000424443 TNP1P09430 55 aa9.74□□□□□ -0.85
TSPAN3-203ENST00000424443 SPRR2EP22531 72 aa9.68□□□□□ -0.86
TSPAN3-203ENST00000424443 SPRR2BP35325 72 aa9.68□□□□□ -0.86
TSPAN3-203ENST00000424443 SPRR2AP35326 72 aa9.68□□□□□ -0.86
TSPAN3-203ENST00000424443 NEBP20929 6669 aa9.65□□□□□ -0.86
TSPAN3-203ENST00000424443 MDN1Q9NU22 5596 aa9.62□□□□□ -0.87
TSPAN3-203ENST00000424443 LCE1AQ5T7P2 110 aa9.57□□□□□ -0.88
TSPAN3-203ENST00000424443 SVIPQ8NHG7 77 aa9.48□□□□□ -0.89
TSPAN3-203ENST00000424443 KRTAP19-7Q3SYF9 63 aa9.47□□□□□ -0.89
TSPAN3-203ENST00000424443 CDC42SE1Q9NRR8 79 aa9.47□□□□□ -0.89
TSPAN3-203ENST00000424443 LCE3AQ5TA76 89 aa9.46□□□□□ -0.9
TSPAN3-203ENST00000424443 KRTAP25-1Q3LHN0 102 aa9.41□□□□□ -0.9
TSPAN3-203ENST00000424443 KRTAP19-5Q3LI72 72 aa9.41□□□□□ -0.9
TSPAN3-203ENST00000424443 MT1EP04732 61 aa9.39□□□□□ -0.91
TSPAN3-203ENST00000424443 KRTAP20-1Q3LI63 56 aa9.39□□□□□ -0.91
TSPAN3-203ENST00000424443 PRO0628Q9UI54 55 aa9.36□□□□□ -0.91
TSPAN3-203ENST00000424443 SPRR2DP22532 72 aa9.36□□□□□ -0.91
TSPAN3-203ENST00000424443 BRK1Q8WUW1 75 aa9.36□□□□□ -0.91
TSPAN3-203ENST00000424443 KRTAP2-3P0C7H8 128 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 130.7 ms