RNA–Protein interactions for RNA: ENST00000423701.6

SEC22C-207, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene SEC22C, Length 1,458 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-207ENST00000423701 FSIP2Q5CZC0 6907 aa10.12□□□□□ -0.79
SEC22C-207ENST00000423701 DMAC1Q96GE9 116 aa10.09□□□□□ -0.79
SEC22C-207ENST00000423701 SNURFQ9Y675 71 aa10.07□□□□□ -0.8
SEC22C-207ENST00000423701 NDUFC1O43677 76 aa10.06□□□□□ -0.8
SEC22C-207ENST00000423701 KRTAP9-6A0A140TA67 174 aa10.04□□□□□ -0.8
SEC22C-207ENST00000423701 LCE2BO14633 110 aa10.04□□□□□ -0.8
SEC22C-207ENST00000423701 C20orf197Q8N268 126 aa10.04□□□□□ -0.8
SEC22C-207ENST00000423701 CRCT1Q9UGL9 99 aa10.02□□□□□ -0.81
SEC22C-207ENST00000423701 USH2AO75445 5202 aa9.95□□□□□ -0.82
SEC22C-207ENST00000423701 COX7CP15954 63 aa9.92□□□□□ -0.82
SEC22C-207ENST00000423701 ACYP2P14621 99 aa9.89□□□□□ -0.83
SEC22C-207ENST00000423701 H0YAA0 97 aa9.87□□□□□ -0.83
SEC22C-207ENST00000423701 SPANXA2-OT1Q8N9U9 137 aa9.87□□□□□ -0.83
SEC22C-207ENST00000423701 KRTAP19-1Q8IUB9 90 aa9.84□□□□□ -0.83
SEC22C-207ENST00000423701 ANAPC13Q9BS18 74 aa9.79□□□□□ -0.84
SEC22C-207ENST00000423701 ADM2Q7Z4H4 148 aa9.79□□□□□ -0.84
SEC22C-207ENST00000423701 SSPOA2VEC9 5147 aa9.78□□□□□ -0.84
SEC22C-207ENST00000423701 SPRR2GQ9BYE4 73 aa9.77□□□□□ -0.85
SEC22C-207ENST00000423701 CYSTM1Q9H1C7 97 aa9.74□□□□□ -0.85
SEC22C-207ENST00000423701 CRIPTQ9P021 101 aa9.73□□□□□ -0.85
SEC22C-207ENST00000423701 CHKB-CPT1BH3BT56 60 aa9.72□□□□□ -0.85
SEC22C-207ENST00000423701 H7BZZ5 65 aa9.7□□□□□ -0.86
SEC22C-207ENST00000423701 SPTSSBQ8NFR3 76 aa9.69□□□□□ -0.86
SEC22C-207ENST00000423701 KRTAP19-8Q3LI54 63 aa9.64□□□□□ -0.87
SEC22C-207ENST00000423701 P0C880 135 aa9.63□□□□□ -0.87
SEC22C-207ENST00000423701 KRTAP3-2Q9BYR7 98 aa9.62□□□□□ -0.87
SEC22C-207ENST00000423701 KRTAP19-6Q3LI70 58 aa9.6□□□□□ -0.87
SEC22C-207ENST00000423701 CCDC179H3BU77 68 aa9.59□□□□□ -0.87
SEC22C-207ENST00000423701 MT1BP07438 61 aa9.59□□□□□ -0.87
SEC22C-207ENST00000423701 Q5VV11 94 aa9.59□□□□□ -0.87
SEC22C-207ENST00000423701 COA5Q86WW8 74 aa9.58□□□□□ -0.88
SEC22C-207ENST00000423701 FCGBPQ9Y6R7 5405 aaPredicted RBP9.51□□□□□ -0.89
SEC22C-207ENST00000423701 R4GN34 69 aa9.5□□□□□ -0.89
SEC22C-207ENST00000423701 M0QZ58 72 aa9.45□□□□□ -0.9
SEC22C-207ENST00000423701 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.34□□□□□ -0.91
SEC22C-207ENST00000423701 ATP5EP56381 51 aaPredicted RBP9.33□□□□□ -0.92
SEC22C-207ENST00000423701 A6NN06 94 aa9.31□□□□□ -0.92
SEC22C-207ENST00000423701 LINC01554Q52M75 96 aa9.29□□□□□ -0.92
SEC22C-207ENST00000423701 KRTAP10-5P60370 271 aa9.28□□□□□ -0.92
SEC22C-207ENST00000423701 TMEM258P61165 79 aa9.24□□□□□ -0.93
SEC22C-207ENST00000423701 PLAC4Q8WY50 150 aa9.23□□□□□ -0.93
SEC22C-207ENST00000423701 SEC61GP60059 68 aa9.22□□□□□ -0.93
SEC22C-207ENST00000423701 SERP1Q9Y6X1 66 aa9.2□□□□□ -0.94
SEC22C-207ENST00000423701 KRTAP13-4Q3LI77 160 aa9.17□□□□□ -0.94
SEC22C-207ENST00000423701 MACF1Q9UPN3 7388 aaKnown RBP9.15□□□□□ -0.94
SEC22C-207ENST00000423701 MT1XP80297 61 aa9.1□□□□□ -0.95
SEC22C-207ENST00000423701 A0A1B0GU69 56 aa9.08□□□□□ -0.96
SEC22C-207ENST00000423701 KRTAP9-7A8MTY7 169 aa9.08□□□□□ -0.96
SEC22C-207ENST00000423701 PRO2289Q9P1D8 64 aa9.08□□□□□ -0.96
SEC22C-207ENST00000423701 A0A1B0GU33 70 aa9.05□□□□□ -0.96
SEC22C-207ENST00000423701 SPATA8Q6RVD6 105 aa8.99□□□□□ -0.97
SEC22C-207ENST00000423701 SYNE2Q8WXH0 6885 aaKnown RBP8.97□□□□□ -0.97
SEC22C-207ENST00000423701 LINC01558Q9Y6Z2 57 aa8.93□□□□□ -0.98
SEC22C-207ENST00000423701 A0A0D9SG42 100 aa8.92□□□□□ -0.98
SEC22C-207ENST00000423701 PRR15LQ9BU68 103 aa8.9□□□□□ -0.98
SEC22C-207ENST00000423701 PCP4P48539 62 aa8.86□□□□□ -0.99
SEC22C-207ENST00000423701 KRTAP6-3Q3LI67 103 aa8.83□□□□□ -1
SEC22C-207ENST00000423701 CAMK2N1Q7Z7J9 78 aa8.79□□□□□ -1
SEC22C-207ENST00000423701 KRTAP12-2P59991 146 aa8.78□□□□□ -1
SEC22C-207ENST00000423701 SMIM26A0A096LP01 95 aa8.77□□□□□ -1
SEC22C-207ENST00000423701 KRTAP12-1P59990 96 aa8.76□□□□□ -1.01
SEC22C-207ENST00000423701 SPINT4Q6UDR6 99 aa8.76□□□□□ -1.01
SEC22C-207ENST00000423701 A8MU10 97 aa8.75□□□□□ -1.01
SEC22C-207ENST00000423701 KRTAP10-7P60409 375 aaPredicted RBP8.7□□□□□ -1.02
SEC22C-207ENST00000423701 KMT2DO14686 5537 aa8.66□□□□□ -1.02
SEC22C-207ENST00000423701 V9GYY9 64 aa8.64□□□□□ -1.03
SEC22C-207ENST00000423701 KRTAP10-12P60413 245 aa8.64□□□□□ -1.03
SEC22C-207ENST00000423701 UQCR11O14957 56 aa8.63□□□□□ -1.03
SEC22C-207ENST00000423701 KRTAP5-9P26371 169 aa8.63□□□□□ -1.03
SEC22C-207ENST00000423701 Q1T7F1 81 aa8.62□□□□□ -1.03
SEC22C-207ENST00000423701 KRTAP4-8A0A0G2JLE6 195 aa8.57□□□□□ -1.04
SEC22C-207ENST00000423701 KRTAP4-8Q9BYQ9 185 aa8.57□□□□□ -1.04
SEC22C-207ENST00000423701 KRTAP8-1Q8IUC2 63 aa8.57□□□□□ -1.04
SEC22C-207ENST00000423701 PSPHP1O15172 72 aa8.56□□□□□ -1.04
SEC22C-207ENST00000423701 RPS28P62857 69 aaKnown RBP8.53□□□□□ -1.04
SEC22C-207ENST00000423701 MIR22HGQ0VDD5 57 aa8.48□□□□□ -1.05
SEC22C-207ENST00000423701 MUC12Q9UKN1 5478 aa8.47□□□□□ -1.05
SEC22C-207ENST00000423701 SPRR2FQ96RM1 72 aa8.46□□□□□ -1.05
SEC22C-207ENST00000423701 NEBP20929 6669 aa8.35□□□□□ -1.07
SEC22C-207ENST00000423701 C10orf95Q9H7T3 257 aa8.33□□□□□ -1.08
SEC22C-207ENST00000423701 MDN1Q9NU22 5596 aa8.32□□□□□ -1.08
SEC22C-207ENST00000423701 A6NED7 52 aa8.28□□□□□ -1.08
SEC22C-207ENST00000423701 SPRR2EP22531 72 aa8.24□□□□□ -1.09
SEC22C-207ENST00000423701 SPRR2BP35325 72 aa8.24□□□□□ -1.09
SEC22C-207ENST00000423701 SPRR2AP35326 72 aa8.24□□□□□ -1.09
SEC22C-207ENST00000423701 K7ERS5 55 aa8.21□□□□□ -1.09
SEC22C-207ENST00000423701 TNP1P09430 55 aa8.21□□□□□ -1.09
SEC22C-207ENST00000423701 LCE1AQ5T7P2 110 aa8.19□□□□□ -1.1
SEC22C-207ENST00000423701 KRTAP19-7Q3SYF9 63 aa8.13□□□□□ -1.11
SEC22C-207ENST00000423701 LCE3AQ5TA76 89 aa8.06□□□□□ -1.12
SEC22C-207ENST00000423701 MT1EP04732 61 aa8.03□□□□□ -1.12
SEC22C-207ENST00000423701 KRTAP19-5Q3LI72 72 aa8.03□□□□□ -1.12
SEC22C-207ENST00000423701 KRTAP20-1Q3LI63 56 aa8□□□□□ -1.13
SEC22C-207ENST00000423701 SVIPQ8NHG7 77 aa8□□□□□ -1.13
SEC22C-207ENST00000423701 CDC42SE1Q9NRR8 79 aa8□□□□□ -1.13
SEC22C-207ENST00000423701 SPRR2DP22532 72 aa7.95□□□□□ -1.14
SEC22C-207ENST00000423701 KRTAP25-1Q3LHN0 102 aa7.95□□□□□ -1.14
SEC22C-207ENST00000423701 KRTAP2-3P0C7H8 128 aa7.88□□□□□ -1.15
SEC22C-207ENST00000423701 KRTAP19-3Q7Z4W3 81 aa7.88□□□□□ -1.15
SEC22C-207ENST00000423701 KRTAP2-4Q9BYR9 128 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms