RNA–Protein interactions for RNA: ENST00000423487.6

ABCA1-203, Transcript of ATP binding cassette subfamily A member 1, humanhuman

TSL 2 BASIC

Gene ABCA1, Length 1,540 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1-203ENST00000423487 S4R3F8 94 aa7.83□□□□□ -1.16
ABCA1-203ENST00000423487 FLGP20930 4061 aaPredicted RBP7.82□□□□□ -1.16
ABCA1-203ENST00000423487 TMEM258P61165 79 aa7.78□□□□□ -1.16
ABCA1-203ENST00000423487 M0R2T5 61 aa7.78□□□□□ -1.16
ABCA1-203ENST00000423487 ATP5EP56381 51 aaPredicted RBP7.78□□□□□ -1.16
ABCA1-203ENST00000423487 LCA10Q71F78 164 aa7.77□□□□□ -1.17
ABCA1-203ENST00000423487 LCE2AQ5TA79 106 aaPredicted RBP7.75□□□□□ -1.17
ABCA1-203ENST00000423487 CHKB-CPT1BH3BT56 60 aa7.72□□□□□ -1.17
ABCA1-203ENST00000423487 CSAG1Q6PB30 78 aa7.7□□□□□ -1.18
ABCA1-203ENST00000423487 COA5Q86WW8 74 aa7.69□□□□□ -1.18
ABCA1-203ENST00000423487 SPTSSBQ8NFR3 76 aa7.65□□□□□ -1.18
ABCA1-203ENST00000423487 KRTAP10-6P60371 365 aaPredicted RBP7.61□□□□□ -1.19
ABCA1-203ENST00000423487 LORP23490 312 aaPredicted RBP7.57□□□□□ -1.2
ABCA1-203ENST00000423487 SERP1Q9Y6X1 66 aa7.54□□□□□ -1.2
ABCA1-203ENST00000423487 LCE2BO14633 110 aa7.53□□□□□ -1.2
ABCA1-203ENST00000423487 KRTAP9-8Q9BYQ0 159 aa7.5□□□□□ -1.21
ABCA1-203ENST00000423487 H0YAA0 97 aa7.49□□□□□ -1.21
ABCA1-203ENST00000423487 MT2AP02795 61 aa7.46□□□□□ -1.22
ABCA1-203ENST00000423487 ADM2Q7Z4H4 148 aa7.42□□□□□ -1.22
ABCA1-203ENST00000423487 KRTAP10-10P60014 251 aa7.41□□□□□ -1.22
ABCA1-203ENST00000423487 MT1FP04733 61 aa7.4□□□□□ -1.22
ABCA1-203ENST00000423487 RPS28P62857 69 aaKnown RBP7.38□□□□□ -1.23
ABCA1-203ENST00000423487 SEC61GP60059 68 aa7.37□□□□□ -1.23
ABCA1-203ENST00000423487 P0C880 135 aa7.32□□□□□ -1.24
ABCA1-203ENST00000423487 SMIM26A0A096LP01 95 aa7.31□□□□□ -1.24
ABCA1-203ENST00000423487 A0A1B0GU69 56 aa7.3□□□□□ -1.24
ABCA1-203ENST00000423487 CRIPTQ9P021 101 aa7.3□□□□□ -1.24
ABCA1-203ENST00000423487 LINC01558Q9Y6Z2 57 aa7.3□□□□□ -1.24
ABCA1-203ENST00000423487 V9GYY9 64 aa7.27□□□□□ -1.25
ABCA1-203ENST00000423487 PRR15LQ9BU68 103 aa7.26□□□□□ -1.25
ABCA1-203ENST00000423487 KRTAP9-3Q9BYQ3 159 aa7.25□□□□□ -1.25
ABCA1-203ENST00000423487 Q1T7F1 81 aa7.22□□□□□ -1.25
ABCA1-203ENST00000423487 R4GN34 69 aa7.21□□□□□ -1.26
ABCA1-203ENST00000423487 M0QZ58 72 aa7.17□□□□□ -1.26
ABCA1-203ENST00000423487 SPRR2GQ9BYE4 73 aa7.17□□□□□ -1.26
ABCA1-203ENST00000423487 A0A1B0GU33 70 aa7.17□□□□□ -1.26
ABCA1-203ENST00000423487 KRTAP19-1Q8IUB9 90 aa7.16□□□□□ -1.26
ABCA1-203ENST00000423487 PSPHP1O15172 72 aa7.11□□□□□ -1.27
ABCA1-203ENST00000423487 Q5VV11 94 aa7.07□□□□□ -1.28
ABCA1-203ENST00000423487 KRTAP13-4Q3LI77 160 aa7.06□□□□□ -1.28
ABCA1-203ENST00000423487 LINC01554Q52M75 96 aa7.04□□□□□ -1.28
ABCA1-203ENST00000423487 KRTAP9-2Q9BYQ4 174 aa7.04□□□□□ -1.28
ABCA1-203ENST00000423487 KRTAP19-8Q3LI54 63 aa7.03□□□□□ -1.28
ABCA1-203ENST00000423487 SPATA8Q6RVD6 105 aa7.03□□□□□ -1.28
ABCA1-203ENST00000423487 UQCR11O14957 56 aa7.02□□□□□ -1.29
ABCA1-203ENST00000423487 USH2AO75445 5202 aa6.94□□□□□ -1.3
ABCA1-203ENST00000423487 MT1BP07438 61 aa6.94□□□□□ -1.3
ABCA1-203ENST00000423487 A0A0D9SG42 100 aa6.93□□□□□ -1.3
ABCA1-203ENST00000423487 A6NN06 94 aa6.93□□□□□ -1.3
ABCA1-203ENST00000423487 MIR22HGQ0VDD5 57 aa6.91□□□□□ -1.3
ABCA1-203ENST00000423487 A6NED7 52 aa6.91□□□□□ -1.3
ABCA1-203ENST00000423487 PLAC4Q8WY50 150 aa6.91□□□□□ -1.3
ABCA1-203ENST00000423487 A8MU10 97 aa6.88□□□□□ -1.31
ABCA1-203ENST00000423487 LOC100996750A0A140TA64 210 aa6.83□□□□□ -1.32
ABCA1-203ENST00000423487 KRTAP4-6Q9BYQ5 205 aa6.83□□□□□ -1.32
ABCA1-203ENST00000423487 SPINT4Q6UDR6 99 aa6.81□□□□□ -1.32
ABCA1-203ENST00000423487 FSIP2Q5CZC0 6907 aa6.81□□□□□ -1.32
ABCA1-203ENST00000423487 KRTAP9-6A0A140TA67 174 aa6.8□□□□□ -1.32
ABCA1-203ENST00000423487 KRTAP12-1P59990 96 aa6.8□□□□□ -1.32
ABCA1-203ENST00000423487 SSPOA2VEC9 5147 aa6.79□□□□□ -1.32
ABCA1-203ENST00000423487 KRTAP12-2P59991 146 aa6.76□□□□□ -1.33
ABCA1-203ENST00000423487 KRTAP19-6Q3LI70 58 aa6.76□□□□□ -1.33
ABCA1-203ENST00000423487 CRCT1Q9UGL9 99 aa6.76□□□□□ -1.33
ABCA1-203ENST00000423487 CDC42SE1Q9NRR8 79 aa6.74□□□□□ -1.33
ABCA1-203ENST00000423487 CAMK2N1Q7Z7J9 78 aa6.72□□□□□ -1.33
ABCA1-203ENST00000423487 K7ERS5 55 aa6.7□□□□□ -1.34
ABCA1-203ENST00000423487 PRO2289Q9P1D8 64 aa6.68□□□□□ -1.34
ABCA1-203ENST00000423487 KRTAP10-5P60370 271 aa6.67□□□□□ -1.34
ABCA1-203ENST00000423487 MT1XP80297 61 aa6.65□□□□□ -1.35
ABCA1-203ENST00000423487 BRK1Q8WUW1 75 aa6.6□□□□□ -1.35
ABCA1-203ENST00000423487 FCGBPQ9Y6R7 5405 aaPredicted RBP6.52□□□□□ -1.37
ABCA1-203ENST00000423487 PRO0628Q9UI54 55 aa6.5□□□□□ -1.37
ABCA1-203ENST00000423487 C10orf95Q9H7T3 257 aa6.45□□□□□ -1.38
ABCA1-203ENST00000423487 KRTAP10-7P60409 375 aaPredicted RBP6.36□□□□□ -1.39
ABCA1-203ENST00000423487 TNP1P09430 55 aa6.35□□□□□ -1.39
ABCA1-203ENST00000423487 KRTAP10-12P60413 245 aa6.33□□□□□ -1.4
ABCA1-203ENST00000423487 ROMO1P60602 79 aa6.33□□□□□ -1.4
ABCA1-203ENST00000423487 KRTAP25-1Q3LHN0 102 aa6.27□□□□□ -1.41
ABCA1-203ENST00000423487 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.25□□□□□ -1.41
ABCA1-203ENST00000423487 PMAIP1Q13794 54 aa6.24□□□□□ -1.41
ABCA1-203ENST00000423487 MACF1Q9UPN3 7388 aaKnown RBP6.22□□□□□ -1.41
ABCA1-203ENST00000423487 KRTAP4-8Q9BYQ9 185 aa6.21□□□□□ -1.42
ABCA1-203ENST00000423487 KRTAP4-8A0A0G2JLE6 195 aa6.18□□□□□ -1.42
ABCA1-203ENST00000423487 KRTAP8-1Q8IUC2 63 aa6.14□□□□□ -1.43
ABCA1-203ENST00000423487 KMT2DO14686 5537 aa6.12□□□□□ -1.43
ABCA1-203ENST00000423487 KRTAP9-7A8MTY7 169 aa6.11□□□□□ -1.43
ABCA1-203ENST00000423487 LCE3AQ5TA76 89 aa6.09□□□□□ -1.43
ABCA1-203ENST00000423487 KRTAP23-1A1A580 65 aa6.07□□□□□ -1.44
ABCA1-203ENST00000423487 SYNE2Q8WXH0 6885 aaKnown RBP6.06□□□□□ -1.44
ABCA1-203ENST00000423487 KRTAP6-3Q3LI67 103 aa6.04□□□□□ -1.44
ABCA1-203ENST00000423487 PP632Q6XCG6 107 aa6□□□□□ -1.45
ABCA1-203ENST00000423487 KRTAP5-9P26371 169 aa5.99□□□□□ -1.45
ABCA1-203ENST00000423487 SPRR2FQ96RM1 72 aa5.96□□□□□ -1.46
ABCA1-203ENST00000423487 KRTAP19-5Q3LI72 72 aa5.94□□□□□ -1.46
ABCA1-203ENST00000423487 KRTAP19-7Q3SYF9 63 aa5.94□□□□□ -1.46
ABCA1-203ENST00000423487 KTN1-AS1Q86SY8 53 aa5.93□□□□□ -1.46
ABCA1-203ENST00000423487 LCE3BQ5TA77 95 aa5.89□□□□□ -1.47
ABCA1-203ENST00000423487 KRTAP4-12Q9BQ66 201 aa5.89□□□□□ -1.47
ABCA1-203ENST00000423487 KRTAP12-3P60328 96 aa5.88□□□□□ -1.47
ABCA1-203ENST00000423487 MT1EP04732 61 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms