RNA–Protein interactions for RNA: ENST00000423113.5

ITGB1-205, Transcript of integrin subunit beta 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene ITGB1, Length 3,729 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-205ENST00000423113 Q8N1X5 172 aa2.85□□□□□ -1.95
ITGB1-205ENST00000423113 LINC00304Q8N9R0 145 aa2.85□□□□□ -1.95
ITGB1-205ENST00000423113 KRTAP10-2P60368 255 aa2.85□□□□□ -1.95
ITGB1-205ENST00000423113 KRTAP17-1Q9BYP8 105 aa2.85□□□□□ -1.95
ITGB1-205ENST00000423113 MUC17Q685J3 4493 aa2.84□□□□□ -1.95
ITGB1-205ENST00000423113 ANAPC11Q9NYG5 84 aa2.84□□□□□ -1.95
ITGB1-205ENST00000423113 MYCBP2O75592 4640 aa2.83□□□□□ -1.96
ITGB1-205ENST00000423113 KRTAP10-1P60331 282 aa2.82□□□□□ -1.96
ITGB1-205ENST00000423113 PSORS1C2Q9UIG4 136 aa2.82□□□□□ -1.96
ITGB1-205ENST00000423113 A0A0D9SG42 100 aa2.81□□□□□ -1.96
ITGB1-205ENST00000423113 KRTAP23-1A1A580 65 aa2.81□□□□□ -1.96
ITGB1-205ENST00000423113 SPRR1BP22528 89 aa2.81□□□□□ -1.96
ITGB1-205ENST00000423113 KRTAP11-1Q8IUC1 163 aa2.81□□□□□ -1.96
ITGB1-205ENST00000423113 KIAA1109Q2LD37 5005 aa2.8□□□□□ -1.96
ITGB1-205ENST00000423113 PANO1I0J062 215 aa2.79□□□□□ -1.96
ITGB1-205ENST00000423113 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP2.79□□□□□ -1.96
ITGB1-205ENST00000423113 Q96NJ1 140 aa2.79□□□□□ -1.96
ITGB1-205ENST00000423113 Q5VSD8 79 aa2.78□□□□□ -1.96
ITGB1-205ENST00000423113 PCLOQ9Y6V0 5065 aa2.78□□□□□ -1.96
ITGB1-205ENST00000423113 H0YAA0 97 aa2.77□□□□□ -1.97
ITGB1-205ENST00000423113 H1FX-AS1Q4G0G2 97 aa2.77□□□□□ -1.97
ITGB1-205ENST00000423113 CAMK2N1Q7Z7J9 78 aa2.76□□□□□ -1.97
ITGB1-205ENST00000423113 C10orf95Q9H7T3 257 aa2.76□□□□□ -1.97
ITGB1-205ENST00000423113 KRTAP1-4P0C5Y4 121 aa2.75□□□□□ -1.97
ITGB1-205ENST00000423113 RPS29P62273 56 aaKnown RBP2.75□□□□□ -1.97
ITGB1-205ENST00000423113 TYMSOSQ8TAI1 123 aa2.73□□□□□ -1.97
ITGB1-205ENST00000423113 RPL37P61927 97 aaKnown RBP2.73□□□□□ -1.97
ITGB1-205ENST00000423113 KRTAP10-8P60410 259 aa2.73□□□□□ -1.97
ITGB1-205ENST00000423113 LRP1Q07954 4544 aaKnown RBP2.73□□□□□ -1.97
ITGB1-205ENST00000423113 MT1HL1P0DM35 61 aa2.72□□□□□ -1.97
ITGB1-205ENST00000423113 SRRM2Q9UQ35 2752 aaKnown RBP2.7□□□□□ -1.98
ITGB1-205ENST00000423113 SMR3BP02814 79 aaPredicted RBP2.7□□□□□ -1.98
ITGB1-205ENST00000423113 HMCN2Q8NDA2 5059 aa2.7□□□□□ -1.98
ITGB1-205ENST00000423113 KRTAP4-8Q9BYQ9 185 aa2.7□□□□□ -1.98
ITGB1-205ENST00000423113 KRTAP4-5Q9BYR2 181 aa2.7□□□□□ -1.98
ITGB1-205ENST00000423113 KRTAP13-3Q3SY46 172 aa2.69□□□□□ -1.98
ITGB1-205ENST00000423113 LCE2CQ5TA81 110 aa2.69□□□□□ -1.98
ITGB1-205ENST00000423113 TPRXLQ17RH7 258 aa2.68□□□□□ -1.98
ITGB1-205ENST00000423113 COX6B2Q6YFQ2 88 aa2.68□□□□□ -1.98
ITGB1-205ENST00000423113 LORP23490 312 aaPredicted RBP2.67□□□□□ -1.98
ITGB1-205ENST00000423113 KRTAP15-1Q3LI76 137 aa2.66□□□□□ -1.98
ITGB1-205ENST00000423113 KRTAP13-2Q52LG2 175 aa2.64□□□□□ -1.99
ITGB1-205ENST00000423113 C9orf92A6NGG3 77 aa2.63□□□□□ -1.99
ITGB1-205ENST00000423113 XP32Q5T750 250 aa2.63□□□□□ -1.99
ITGB1-205ENST00000423113 KRTAP9-2Q9BYQ4 174 aa2.6□□□□□ -1.99
ITGB1-205ENST00000423113 HERC1Q15751 4861 aa2.6□□□□□ -1.99
ITGB1-205ENST00000423113 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.6□□□□□ -1.99
ITGB1-205ENST00000423113 KRTAP9-6A0A140TA67 174 aa2.58□□□□□ -2
ITGB1-205ENST00000423113 S4R3F8 94 aa2.58□□□□□ -2
ITGB1-205ENST00000423113 PLAC4Q8WY50 150 aa2.58□□□□□ -2
ITGB1-205ENST00000423113 FLGP20930 4061 aaPredicted RBP2.57□□□□□ -2
ITGB1-205ENST00000423113 LPAP08519 4548 aa2.53□□□□□ -2
ITGB1-205ENST00000423113 KRTAP4-12Q9BQ66 201 aa2.52□□□□□ -2.01
ITGB1-205ENST00000423113 LCE3BQ5TA77 95 aa2.51□□□□□ -2.01
ITGB1-205ENST00000423113 KRTAP4-8A0A0G2JLE6 195 aa2.5□□□□□ -2.01
ITGB1-205ENST00000423113 KRTAP13-4Q3LI77 160 aa2.5□□□□□ -2.01
ITGB1-205ENST00000423113 KRTAP19-2Q3LHN2 52 aa2.49□□□□□ -2.01
ITGB1-205ENST00000423113 KRTAP12-2P59991 146 aa2.49□□□□□ -2.01
ITGB1-205ENST00000423113 KRTAP3-1Q9BYR8 98 aa2.48□□□□□ -2.01
ITGB1-205ENST00000423113 KRTAP9-9Q9BYP9 154 aa2.48□□□□□ -2.01
ITGB1-205ENST00000423113 KRTAP9-4Q9BYQ2 154 aa2.48□□□□□ -2.01
ITGB1-205ENST00000423113 LRP2P98164 4655 aa2.48□□□□□ -2.01
ITGB1-205ENST00000423113 RNF213Q63HN8 5207 aa2.45□□□□□ -2.02
ITGB1-205ENST00000423113 KRTAP10-6P60371 365 aaPredicted RBP2.44□□□□□ -2.02
ITGB1-205ENST00000423113 R4GN34 69 aa2.44□□□□□ -2.02
ITGB1-205ENST00000423113 M0QZ58 72 aa2.44□□□□□ -2.02
ITGB1-205ENST00000423113 KRTAP4-7Q9BYR0 210 aa2.44□□□□□ -2.02
ITGB1-205ENST00000423113 KRTAP12-1P59990 96 aa2.43□□□□□ -2.02
ITGB1-205ENST00000423113 UBR4Q5T4S7 5183 aa2.4□□□□□ -2.03
ITGB1-205ENST00000423113 KRTAP19-1Q8IUB9 90 aa2.39□□□□□ -2.03
ITGB1-205ENST00000423113 LCE1DQ5T752 114 aa2.39□□□□□ -2.03
ITGB1-205ENST00000423113 KRTAP4-1Q9BYQ7 146 aa2.37□□□□□ -2.03
ITGB1-205ENST00000423113 PRO2289Q9P1D8 64 aa2.37□□□□□ -2.03
ITGB1-205ENST00000423113 KRTAP4-9Q9BYQ8 210 aa2.35□□□□□ -2.03
ITGB1-205ENST00000423113 PP632Q6XCG6 107 aa2.35□□□□□ -2.03
ITGB1-205ENST00000423113 FAT4Q6V0I7 4981 aa2.33□□□□□ -2.04
ITGB1-205ENST00000423113 KRTAP4-2Q9BYR5 136 aa2.31□□□□□ -2.04
ITGB1-205ENST00000423113 MUC2Q02817 5179 aa2.29□□□□□ -2.04
ITGB1-205ENST00000423113 MT1HP80294 61 aa2.28□□□□□ -2.04
ITGB1-205ENST00000423113 TNP1P09430 55 aa2.26□□□□□ -2.05
ITGB1-205ENST00000423113 INE1O15225 51 aa2.26□□□□□ -2.05
ITGB1-205ENST00000423113 KRTAP9-8Q9BYQ0 159 aa2.23□□□□□ -2.05
ITGB1-205ENST00000423113 KRTAP4-11Q9BYQ6 195 aa2.22□□□□□ -2.05
ITGB1-205ENST00000423113 M0R2T5 61 aa2.18□□□□□ -2.06
ITGB1-205ENST00000423113 KRTAP5-3Q6L8H2 238 aa2.18□□□□□ -2.06
ITGB1-205ENST00000423113 KRTAP9-3Q9BYQ3 159 aa2.16□□□□□ -2.06
ITGB1-205ENST00000423113 MT2AP02795 61 aa2.15□□□□□ -2.07
ITGB1-205ENST00000423113 SPRR2GQ9BYE4 73 aa2.14□□□□□ -2.07
ITGB1-205ENST00000423113 SSPOA2VEC9 5147 aa2.13□□□□□ -2.07
ITGB1-205ENST00000423113 KRTAP19-8Q3LI54 63 aa2.13□□□□□ -2.07
ITGB1-205ENST00000423113 MT1FP04733 61 aa2.11□□□□□ -2.07
ITGB1-205ENST00000423113 KRTAP19-4Q3LI73 84 aa2.09□□□□□ -2.07
ITGB1-205ENST00000423113 CRCT1Q9UGL9 99 aa2.08□□□□□ -2.08
ITGB1-205ENST00000423113 USH2AO75445 5202 aa2.08□□□□□ -2.08
ITGB1-205ENST00000423113 LCE5AQ5TCM9 118 aa2.08□□□□□ -2.08
ITGB1-205ENST00000423113 KRTAP19-6Q3LI70 58 aa2.07□□□□□ -2.08
ITGB1-205ENST00000423113 SPRR5A0A1B0GTR4 108 aa2.07□□□□□ -2.08
ITGB1-205ENST00000423113 KRTAP10-10P60014 251 aa2.06□□□□□ -2.08
ITGB1-205ENST00000423113 MT1BP07438 61 aa2.03□□□□□ -2.08
ITGB1-205ENST00000423113 LCE4AQ5TA78 99 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms