RNA–Protein interactions for RNA: ENST00000422748.5

CALD1-205, Transcript of caldesmon 1, humanhuman

TSL 2 BASIC

Gene CALD1, Length 2,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-205ENST00000422748 RYR2Q92736 4967 aa6.97□□□□□ -1.29
CALD1-205ENST00000422748 C9orf92A6NGG3 77 aa6.95□□□□□ -1.3
CALD1-205ENST00000422748 KRTAP13-4Q3LI77 160 aa6.95□□□□□ -1.3
CALD1-205ENST00000422748 KMT2CQ8NEZ4 4911 aaKnown RBP6.94□□□□□ -1.3
CALD1-205ENST00000422748 DYNC1H1Q14204 4646 aaKnown RBP6.94□□□□□ -1.3
CALD1-205ENST00000422748 VPS13BQ7Z7G8 4022 aa6.93□□□□□ -1.3
CALD1-205ENST00000422748 KRTAP10-6P60371 365 aaPredicted RBP6.91□□□□□ -1.3
CALD1-205ENST00000422748 APOBP04114 4563 aaKnown RBP6.86□□□□□ -1.31
CALD1-205ENST00000422748 DMBT1Q9UGM3 2413 aaPredicted RBP6.85□□□□□ -1.31
CALD1-205ENST00000422748 A0A1B0GVY2 172 aa6.84□□□□□ -1.31
CALD1-205ENST00000422748 KRTAP23-1A1A580 65 aa6.82□□□□□ -1.32
CALD1-205ENST00000422748 RPS29P62273 56 aaKnown RBP6.81□□□□□ -1.32
CALD1-205ENST00000422748 KRTAP3-2Q9BYR7 98 aa6.81□□□□□ -1.32
CALD1-205ENST00000422748 S4R3F8 94 aa6.8□□□□□ -1.32
CALD1-205ENST00000422748 KRTAP3-3Q9BYR6 98 aa6.79□□□□□ -1.32
CALD1-205ENST00000422748 FAT1Q14517 4588 aa6.79□□□□□ -1.32
CALD1-205ENST00000422748 RYR3Q15413 4870 aa6.78□□□□□ -1.32
CALD1-205ENST00000422748 KRTAP12-2P59991 146 aa6.76□□□□□ -1.33
CALD1-205ENST00000422748 KRTAP10-4P60372 401 aaPredicted RBP6.68□□□□□ -1.34
CALD1-205ENST00000422748 SMR3BP02814 79 aaPredicted RBP6.67□□□□□ -1.34
CALD1-205ENST00000422748 XP32Q5T750 250 aa6.67□□□□□ -1.34
CALD1-205ENST00000422748 PKHD1L1Q86WI1 4243 aa6.66□□□□□ -1.34
CALD1-205ENST00000422748 KRTAP12-1P59990 96 aa6.66□□□□□ -1.34
CALD1-205ENST00000422748 HSPG2P98160 4391 aa6.65□□□□□ -1.35
CALD1-205ENST00000422748 RYR1P21817 5038 aa6.6□□□□□ -1.35
CALD1-205ENST00000422748 KRTAP10-8P60410 259 aa6.56□□□□□ -1.36
CALD1-205ENST00000422748 TNXBP22105 4242 aa6.52□□□□□ -1.37
CALD1-205ENST00000422748 EPPK1P58107 5090 aaKnown RBP6.52□□□□□ -1.37
CALD1-205ENST00000422748 LRP1Q07954 4544 aaKnown RBP6.51□□□□□ -1.37
CALD1-205ENST00000422748 KIAA1109Q2LD37 5005 aa6.5□□□□□ -1.37
CALD1-205ENST00000422748 KRTAP17-1Q9BYP8 105 aa6.5□□□□□ -1.37
CALD1-205ENST00000422748 FAT3Q8TDW7 4589 aa6.48□□□□□ -1.37
CALD1-205ENST00000422748 PLAC4Q8WY50 150 aa6.47□□□□□ -1.37
CALD1-205ENST00000422748 Q5VSD8 79 aa6.44□□□□□ -1.38
CALD1-205ENST00000422748 M0QZ58 72 aa6.42□□□□□ -1.38
CALD1-205ENST00000422748 MYCBP2O75592 4640 aa6.38□□□□□ -1.39
CALD1-205ENST00000422748 PRO2289Q9P1D8 64 aa6.37□□□□□ -1.39
CALD1-205ENST00000422748 R4GN34 69 aa6.35□□□□□ -1.39
CALD1-205ENST00000422748 MT1HL1P0DM35 61 aa6.28□□□□□ -1.4
CALD1-205ENST00000422748 KRTAP4-5Q9BYR2 181 aa6.22□□□□□ -1.41
CALD1-205ENST00000422748 LPAP08519 4548 aa6.21□□□□□ -1.42
CALD1-205ENST00000422748 ABCA13Q86UQ4 5058 aa6.19□□□□□ -1.42
CALD1-205ENST00000422748 BIRC6Q9NR09 4857 aa6.17□□□□□ -1.42
CALD1-205ENST00000422748 HERC2O95714 4834 aa6.17□□□□□ -1.42
CALD1-205ENST00000422748 PP632Q6XCG6 107 aa6.1□□□□□ -1.43
CALD1-205ENST00000422748 LORP23490 312 aaPredicted RBP6.08□□□□□ -1.44
CALD1-205ENST00000422748 LRP2P98164 4655 aa6.05□□□□□ -1.44
CALD1-205ENST00000422748 SPRR5A0A1B0GTR4 108 aa5.92□□□□□ -1.46
CALD1-205ENST00000422748 PCLOQ9Y6V0 5065 aa5.9□□□□□ -1.47
CALD1-205ENST00000422748 INE1O15225 51 aa5.88□□□□□ -1.47
CALD1-205ENST00000422748 HERC1Q15751 4861 aa5.85□□□□□ -1.47
CALD1-205ENST00000422748 MUC17Q685J3 4493 aa5.84□□□□□ -1.47
CALD1-205ENST00000422748 HMCN2Q8NDA2 5059 aa5.79□□□□□ -1.48
CALD1-205ENST00000422748 TNP1P09430 55 aa5.77□□□□□ -1.49
CALD1-205ENST00000422748 LCE2AQ5TA79 106 aaPredicted RBP5.77□□□□□ -1.49
CALD1-205ENST00000422748 KRTAP4-1Q9BYQ7 146 aa5.74□□□□□ -1.49
CALD1-205ENST00000422748 LCE2CQ5TA81 110 aa5.73□□□□□ -1.49
CALD1-205ENST00000422748 MUC2Q02817 5179 aa5.66□□□□□ -1.5
CALD1-205ENST00000422748 KRTAP19-2Q3LHN2 52 aa5.64□□□□□ -1.51
CALD1-205ENST00000422748 LCE2DQ5TA82 110 aaPredicted RBP5.62□□□□□ -1.51
CALD1-205ENST00000422748 FLGP20930 4061 aaPredicted RBP5.56□□□□□ -1.52
CALD1-205ENST00000422748 UBR4Q5T4S7 5183 aa5.5□□□□□ -1.53
CALD1-205ENST00000422748 RNF213Q63HN8 5207 aa5.49□□□□□ -1.53
CALD1-205ENST00000422748 LCE3AQ5TA76 89 aa5.45□□□□□ -1.54
CALD1-205ENST00000422748 FAT4Q6V0I7 4981 aa5.43□□□□□ -1.54
CALD1-205ENST00000422748 LCE2BO14633 110 aa5.35□□□□□ -1.55
CALD1-205ENST00000422748 MT1HP80294 61 aa5.27□□□□□ -1.57
CALD1-205ENST00000422748 KRTAP8-1Q8IUC2 63 aa5.26□□□□□ -1.57
CALD1-205ENST00000422748 SPRR2GQ9BYE4 73 aa5.24□□□□□ -1.57
CALD1-205ENST00000422748 KRTAP19-1Q8IUB9 90 aa5.22□□□□□ -1.57
CALD1-205ENST00000422748 KRTAP10-12P60413 245 aa5.16□□□□□ -1.58
CALD1-205ENST00000422748 M0R2T5 61 aa5.14□□□□□ -1.59
CALD1-205ENST00000422748 KRTAP12-3P60328 96 aa5.13□□□□□ -1.59
CALD1-205ENST00000422748 KRTAP9-8Q9BYQ0 159 aa5.12□□□□□ -1.59
CALD1-205ENST00000422748 MT2AP02795 61 aa5.1□□□□□ -1.59
CALD1-205ENST00000422748 MT1FP04733 61 aa5.08□□□□□ -1.6
CALD1-205ENST00000422748 KRTAP10-10P60014 251 aa5.03□□□□□ -1.6
CALD1-205ENST00000422748 KRTAP10-5P60370 271 aa5□□□□□ -1.61
CALD1-205ENST00000422748 MT1XP80297 61 aa4.97□□□□□ -1.61
CALD1-205ENST00000422748 KRTAP9-3Q9BYQ3 159 aa4.92□□□□□ -1.62
CALD1-205ENST00000422748 KRTAP10-7P60409 375 aaPredicted RBP4.91□□□□□ -1.62
CALD1-205ENST00000422748 KRTAP19-8Q3LI54 63 aa4.91□□□□□ -1.62
CALD1-205ENST00000422748 MT1BP07438 61 aa4.88□□□□□ -1.63
CALD1-205ENST00000422748 LCE3CQ5T5A8 94 aa4.86□□□□□ -1.63
CALD1-205ENST00000422748 KRTAP2-2Q9BYT5 123 aa4.85□□□□□ -1.63
CALD1-205ENST00000422748 KRTAP9-6A8MVA2 160 aa4.79□□□□□ -1.64
CALD1-205ENST00000422748 KRTAP19-5Q3LI72 72 aa4.78□□□□□ -1.64
CALD1-205ENST00000422748 KRTAP2-3P0C7H8 128 aa4.74□□□□□ -1.65
CALD1-205ENST00000422748 KRTAP2-4Q9BYR9 128 aa4.74□□□□□ -1.65
CALD1-205ENST00000422748 KRTAP2-1Q9BYU5 128 aa4.74□□□□□ -1.65
CALD1-205ENST00000422748 USH2AO75445 5202 aa4.69□□□□□ -1.66
CALD1-205ENST00000422748 LCE5AQ5TCM9 118 aa4.62□□□□□ -1.67
CALD1-205ENST00000422748 KMT2DO14686 5537 aa4.61□□□□□ -1.67
CALD1-205ENST00000422748 KRTAP4-7Q9BYR0 210 aa4.57□□□□□ -1.68
CALD1-205ENST00000422748 SSPOA2VEC9 5147 aa4.52□□□□□ -1.69
CALD1-205ENST00000422748 KRTAP4-8A0A0G2JLE6 195 aa4.51□□□□□ -1.69
CALD1-205ENST00000422748 KRTAP4-8Q9BYQ9 185 aa4.51□□□□□ -1.69
CALD1-205ENST00000422748 LCE1AQ5T7P2 110 aa4.47□□□□□ -1.69
CALD1-205ENST00000422748 KRTAP19-7Q3SYF9 63 aa4.42□□□□□ -1.7
CALD1-205ENST00000422748 LCE1FQ5T754 118 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms