RNA–Protein interactions for RNA: ENST00000422026.1

SSX2IP-202, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 3

Gene SSX2IP, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-202ENST00000422026 COX6B2Q6YFQ2 88 aa7.39□□□□□ -1.23
SSX2IP-202ENST00000422026 KRTAP4-12Q9BQ66 201 aa7.38□□□□□ -1.23
SSX2IP-202ENST00000422026 ACYP2P14621 99 aa7.36□□□□□ -1.23
SSX2IP-202ENST00000422026 MPLKIPQ8TAP9 179 aa7.35□□□□□ -1.23
SSX2IP-202ENST00000422026 KRTAP4-1Q9BYQ7 146 aa7.32□□□□□ -1.24
SSX2IP-202ENST00000422026 KRTAP9-9Q9BYP9 154 aa7.31□□□□□ -1.24
SSX2IP-202ENST00000422026 KRTAP9-4Q9BYQ2 154 aa7.31□□□□□ -1.24
SSX2IP-202ENST00000422026 SERP1Q9Y6X1 66 aa7.29□□□□□ -1.24
SSX2IP-202ENST00000422026 KRTAP3-1Q9BYR8 98 aa7.27□□□□□ -1.25
SSX2IP-202ENST00000422026 CHKB-CPT1BH3BT56 60 aa7.25□□□□□ -1.25
SSX2IP-202ENST00000422026 H1FX-AS1Q4G0G2 97 aa7.25□□□□□ -1.25
SSX2IP-202ENST00000422026 COA5Q86WW8 74 aa7.25□□□□□ -1.25
SSX2IP-202ENST00000422026 RPS28P62857 69 aaKnown RBP7.23□□□□□ -1.25
SSX2IP-202ENST00000422026 UBR4Q5T4S7 5183 aa7.21□□□□□ -1.25
SSX2IP-202ENST00000422026 KRTAP19-1Q8IUB9 90 aa7.21□□□□□ -1.26
SSX2IP-202ENST00000422026 KRTAP4-8A0A0G2JLE6 195 aa7.2□□□□□ -1.26
SSX2IP-202ENST00000422026 SPTSSBQ8NFR3 76 aa7.19□□□□□ -1.26
SSX2IP-202ENST00000422026 S4R3F8 94 aa7.17□□□□□ -1.26
SSX2IP-202ENST00000422026 RNF213Q63HN8 5207 aa7.17□□□□□ -1.26
SSX2IP-202ENST00000422026 KRTAP19-2Q3LHN2 52 aa7.13□□□□□ -1.27
SSX2IP-202ENST00000422026 MUC2Q02817 5179 aa7.1□□□□□ -1.27
SSX2IP-202ENST00000422026 LCA10Q71F78 164 aa7.1□□□□□ -1.27
SSX2IP-202ENST00000422026 SMIM26A0A096LP01 95 aa7.08□□□□□ -1.28
SSX2IP-202ENST00000422026 CSAG1Q6PB30 78 aa7.05□□□□□ -1.28
SSX2IP-202ENST00000422026 V9GYY9 64 aa7.03□□□□□ -1.28
SSX2IP-202ENST00000422026 KRTAP4-7Q9BYR0 210 aa6.97□□□□□ -1.29
SSX2IP-202ENST00000422026 Q1T7F1 81 aa6.96□□□□□ -1.3
SSX2IP-202ENST00000422026 LCE1DQ5T752 114 aa6.96□□□□□ -1.3
SSX2IP-202ENST00000422026 FLGP20930 4061 aaPredicted RBP6.95□□□□□ -1.3
SSX2IP-202ENST00000422026 SEC61GP60059 68 aa6.95□□□□□ -1.3
SSX2IP-202ENST00000422026 LINC01558Q9Y6Z2 57 aa6.95□□□□□ -1.3
SSX2IP-202ENST00000422026 PRR15LQ9BU68 103 aa6.93□□□□□ -1.3
SSX2IP-202ENST00000422026 FAT4Q6V0I7 4981 aa6.93□□□□□ -1.3
SSX2IP-202ENST00000422026 MT1HP80294 61 aa6.92□□□□□ -1.3
SSX2IP-202ENST00000422026 A0A1B0GU69 56 aa6.9□□□□□ -1.3
SSX2IP-202ENST00000422026 H0YAA0 97 aa6.9□□□□□ -1.3
SSX2IP-202ENST00000422026 M0R2T5 61 aa6.9□□□□□ -1.3
SSX2IP-202ENST00000422026 ADM2Q7Z4H4 148 aa6.81□□□□□ -1.32
SSX2IP-202ENST00000422026 PSPHP1O15172 72 aa6.79□□□□□ -1.32
SSX2IP-202ENST00000422026 KRTAP4-9Q9BYQ8 210 aa6.77□□□□□ -1.33
SSX2IP-202ENST00000422026 KRTAP10-6P60371 365 aaPredicted RBP6.74□□□□□ -1.33
SSX2IP-202ENST00000422026 Q5VV11 94 aa6.74□□□□□ -1.33
SSX2IP-202ENST00000422026 A0A1B0GU33 70 aa6.71□□□□□ -1.34
SSX2IP-202ENST00000422026 P0C880 135 aa6.7□□□□□ -1.34
SSX2IP-202ENST00000422026 UQCR11O14957 56 aa6.68□□□□□ -1.34
SSX2IP-202ENST00000422026 CRIPTQ9P021 101 aa6.68□□□□□ -1.34
SSX2IP-202ENST00000422026 KRTAP4-2Q9BYR5 136 aa6.67□□□□□ -1.34
SSX2IP-202ENST00000422026 M0QZ58 72 aa6.65□□□□□ -1.34
SSX2IP-202ENST00000422026 A6NED7 52 aa6.64□□□□□ -1.35
SSX2IP-202ENST00000422026 KRTAP9-8Q9BYQ0 159 aa6.63□□□□□ -1.35
SSX2IP-202ENST00000422026 R4GN34 69 aa6.62□□□□□ -1.35
SSX2IP-202ENST00000422026 MT2AP02795 61 aa6.61□□□□□ -1.35
SSX2IP-202ENST00000422026 KRTAP10-10P60014 251 aa6.59□□□□□ -1.35
SSX2IP-202ENST00000422026 MIR22HGQ0VDD5 57 aa6.57□□□□□ -1.36
SSX2IP-202ENST00000422026 MT1FP04733 61 aa6.56□□□□□ -1.36
SSX2IP-202ENST00000422026 LCE4AQ5TA78 99 aa6.54□□□□□ -1.36
SSX2IP-202ENST00000422026 SPATA8Q6RVD6 105 aa6.54□□□□□ -1.36
SSX2IP-202ENST00000422026 CDC42SE1Q9NRR8 79 aa6.52□□□□□ -1.37
SSX2IP-202ENST00000422026 KRTAP13-4Q3LI77 160 aa6.51□□□□□ -1.37
SSX2IP-202ENST00000422026 KRTAP4-11Q9BYQ6 195 aa6.49□□□□□ -1.37
SSX2IP-202ENST00000422026 SPRR2GQ9BYE4 73 aa6.48□□□□□ -1.37
SSX2IP-202ENST00000422026 BRK1Q8WUW1 75 aa6.45□□□□□ -1.38
SSX2IP-202ENST00000422026 LINC01554Q52M75 96 aa6.42□□□□□ -1.38
SSX2IP-202ENST00000422026 A0A0D9SG42 100 aa6.41□□□□□ -1.38
SSX2IP-202ENST00000422026 A6NN06 94 aa6.41□□□□□ -1.38
SSX2IP-202ENST00000422026 A8MU10 97 aa6.41□□□□□ -1.38
SSX2IP-202ENST00000422026 KRTAP9-3Q9BYQ3 159 aa6.4□□□□□ -1.38
SSX2IP-202ENST00000422026 K7ERS5 55 aa6.39□□□□□ -1.39
SSX2IP-202ENST00000422026 KRTAP9-7A8MTY7 169 aa6.34□□□□□ -1.39
SSX2IP-202ENST00000422026 KRTAP19-8Q3LI54 63 aa6.32□□□□□ -1.4
SSX2IP-202ENST00000422026 SPINT4Q6UDR6 99 aa6.31□□□□□ -1.4
SSX2IP-202ENST00000422026 KRTAP12-1P59990 96 aa6.3□□□□□ -1.4
SSX2IP-202ENST00000422026 KRTAP19-4Q3LI73 84 aa6.3□□□□□ -1.4
SSX2IP-202ENST00000422026 LCE5AQ5TCM9 118 aa6.28□□□□□ -1.4
SSX2IP-202ENST00000422026 PLAC4Q8WY50 150 aa6.28□□□□□ -1.4
SSX2IP-202ENST00000422026 PRO0628Q9UI54 55 aa6.28□□□□□ -1.4
SSX2IP-202ENST00000422026 KRTAP12-2P59991 146 aa6.26□□□□□ -1.41
SSX2IP-202ENST00000422026 MT1BP07438 61 aa6.19□□□□□ -1.42
SSX2IP-202ENST00000422026 CAMK2N1Q7Z7J9 78 aa6.19□□□□□ -1.42
SSX2IP-202ENST00000422026 PMAIP1Q13794 54 aa6.11□□□□□ -1.43
SSX2IP-202ENST00000422026 KRTAP5-3Q6L8H2 238 aa6.08□□□□□ -1.44
SSX2IP-202ENST00000422026 PRO2289Q9P1D8 64 aa6.06□□□□□ -1.44
SSX2IP-202ENST00000422026 USH2AO75445 5202 aa6.06□□□□□ -1.44
SSX2IP-202ENST00000422026 ROMO1P60602 79 aa6.03□□□□□ -1.44
SSX2IP-202ENST00000422026 MT1XP80297 61 aa5.97□□□□□ -1.45
SSX2IP-202ENST00000422026 KRTAP10-5P60370 271 aa5.96□□□□□ -1.46
SSX2IP-202ENST00000422026 C10orf95Q9H7T3 257 aa5.95□□□□□ -1.46
SSX2IP-202ENST00000422026 KRTAP19-6Q3LI70 58 aa5.94□□□□□ -1.46
SSX2IP-202ENST00000422026 TNP1P09430 55 aa5.89□□□□□ -1.47
SSX2IP-202ENST00000422026 KRTAP25-1Q3LHN0 102 aa5.89□□□□□ -1.47
SSX2IP-202ENST00000422026 SSPOA2VEC9 5147 aa5.87□□□□□ -1.47
SSX2IP-202ENST00000422026 KTN1-AS1Q86SY8 53 aa5.85□□□□□ -1.47
SSX2IP-202ENST00000422026 H3BS24 57 aa5.84□□□□□ -1.47
SSX2IP-202ENST00000422026 FSIP2Q5CZC0 6907 aa5.81□□□□□ -1.48
SSX2IP-202ENST00000422026 CRCT1Q9UGL9 99 aa5.77□□□□□ -1.49
SSX2IP-202ENST00000422026 KRTAP23-1A1A580 65 aa5.72□□□□□ -1.49
SSX2IP-202ENST00000422026 KRTAP10-7P60409 375 aaPredicted RBP5.7□□□□□ -1.5
SSX2IP-202ENST00000422026 KRTAP10-12P60413 245 aa5.7□□□□□ -1.5
SSX2IP-202ENST00000422026 PP632Q6XCG6 107 aa5.7□□□□□ -1.5
SSX2IP-202ENST00000422026 PRAC1Q96KF2 57 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 139.3 ms