RNA–Protein interactions for RNA: ENST00000421832.2

CTU1-201, Transcript of cytosolic thiouridylase subunit 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CTU1, Length 2,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTU1-201ENST00000421832 MIR22HGQ0VDD5 57 aa13.64□□□□□ -0.23
CTU1-201ENST00000421832 J3QL48 77 aa13.55□□□□□ -0.24
CTU1-201ENST00000421832 IGKV2-30P06310 120 aa13.52□□□□□ -0.25
CTU1-201ENST00000421832 H3BS24 57 aa13.38□□□□□ -0.27
CTU1-201ENST00000421832 CSAG1Q6PB30 78 aa13.38□□□□□ -0.27
CTU1-201ENST00000421832 C9orf92A6NGG3 77 aa13.36□□□□□ -0.27
CTU1-201ENST00000421832 HERC1Q15751 4861 aa13.32□□□□□ -0.28
CTU1-201ENST00000421832 KRTAP16-1A8MUX0 517 aa13.32□□□□□ -0.28
CTU1-201ENST00000421832 IGKV2D-30A0A075B6S6 120 aa13.25□□□□□ -0.29
CTU1-201ENST00000421832 LPAP08519 4548 aa13.23□□□□□ -0.29
CTU1-201ENST00000421832 TPRXLQ17RH7 258 aa13.11□□□□□ -0.31
CTU1-201ENST00000421832 XP32Q5T750 250 aa13.1□□□□□ -0.31
CTU1-201ENST00000421832 LRP2P98164 4655 aa13.09□□□□□ -0.31
CTU1-201ENST00000421832 C20orf166-AS1Q96NR2 134 aa13.09□□□□□ -0.31
CTU1-201ENST00000421832 A8MUU9 505 aa13.08□□□□□ -0.32
CTU1-201ENST00000421832 HMCN2Q8NDA2 5059 aa13.05□□□□□ -0.32
CTU1-201ENST00000421832 KRTAP25-1Q3LHN0 102 aa13.04□□□□□ -0.32
CTU1-201ENST00000421832 RPL37P61927 97 aaKnown RBP12.95□□□□□ -0.34
CTU1-201ENST00000421832 H0YAA0 97 aa12.93□□□□□ -0.34
CTU1-201ENST00000421832 ROMO1P60602 79 aa12.91□□□□□ -0.34
CTU1-201ENST00000421832 A0A1B0GU33 70 aa12.82□□□□□ -0.36
CTU1-201ENST00000421832 H1FX-AS1Q4G0G2 97 aa12.77□□□□□ -0.36
CTU1-201ENST00000421832 K7ERS5 55 aa12.69□□□□□ -0.38
CTU1-201ENST00000421832 MUC17Q685J3 4493 aa12.69□□□□□ -0.38
CTU1-201ENST00000421832 SEC61BP60468 96 aaKnown RBP12.63□□□□□ -0.39
CTU1-201ENST00000421832 KRTAP4-1Q9BYQ7 146 aa12.55□□□□□ -0.4
CTU1-201ENST00000421832 UBR4Q5T4S7 5183 aa12.54□□□□□ -0.4
CTU1-201ENST00000421832 KRTAP3-1Q9BYR8 98 aa12.52□□□□□ -0.4
CTU1-201ENST00000421832 MUC2Q02817 5179 aa12.49□□□□□ -0.41
CTU1-201ENST00000421832 P0C880 135 aa12.47□□□□□ -0.41
CTU1-201ENST00000421832 COX6B2Q6YFQ2 88 aa12.43□□□□□ -0.42
CTU1-201ENST00000421832 RNF213Q63HN8 5207 aa12.37□□□□□ -0.43
CTU1-201ENST00000421832 CRIPTQ9P021 101 aa12.34□□□□□ -0.43
CTU1-201ENST00000421832 SPINT4Q6UDR6 99 aa12.18□□□□□ -0.46
CTU1-201ENST00000421832 KRTAP19-2Q3LHN2 52 aa12.15□□□□□ -0.46
CTU1-201ENST00000421832 KRTAP10-6P60371 365 aaPredicted RBP12.12□□□□□ -0.47
CTU1-201ENST00000421832 KRTAP15-1Q3LI76 137 aa12.06□□□□□ -0.48
CTU1-201ENST00000421832 KRTAP13-4Q3LI77 160 aa12.01□□□□□ -0.49
CTU1-201ENST00000421832 FAT4Q6V0I7 4981 aa11.98□□□□□ -0.49
CTU1-201ENST00000421832 KRTAP3-2Q9BYR7 98 aa11.98□□□□□ -0.49
CTU1-201ENST00000421832 KRTAP3-3Q9BYR6 98 aa11.96□□□□□ -0.49
CTU1-201ENST00000421832 FLGP20930 4061 aaPredicted RBP11.96□□□□□ -0.49
CTU1-201ENST00000421832 LCE2CQ5TA81 110 aa11.96□□□□□ -0.5
CTU1-201ENST00000421832 A0A0D9SG42 100 aa11.93□□□□□ -0.5
CTU1-201ENST00000421832 NDUFAF8A1L188 74 aa11.9□□□□□ -0.5
CTU1-201ENST00000421832 S4R3F8 94 aa11.89□□□□□ -0.51
CTU1-201ENST00000421832 C10orf95Q9H7T3 257 aa11.87□□□□□ -0.51
CTU1-201ENST00000421832 KRTAP12-2P59991 146 aa11.71□□□□□ -0.54
CTU1-201ENST00000421832 MT1HP80294 61 aa11.71□□□□□ -0.54
CTU1-201ENST00000421832 KRTAP12-1P59990 96 aa11.65□□□□□ -0.54
CTU1-201ENST00000421832 M0R2T5 61 aa11.53□□□□□ -0.56
CTU1-201ENST00000421832 M0QZ58 72 aa11.51□□□□□ -0.57
CTU1-201ENST00000421832 LCE2AQ5TA79 106 aaPredicted RBP11.42□□□□□ -0.58
CTU1-201ENST00000421832 KRTAP9-8Q9BYQ0 159 aa11.25□□□□□ -0.61
CTU1-201ENST00000421832 LORP23490 312 aaPredicted RBP11.24□□□□□ -0.61
CTU1-201ENST00000421832 MT2AP02795 61 aa11.2□□□□□ -0.62
CTU1-201ENST00000421832 PLAC4Q8WY50 150 aa11.18□□□□□ -0.62
CTU1-201ENST00000421832 A0A0A0MQY5 61 aa11.16□□□□□ -0.62
CTU1-201ENST00000421832 MT1FP04733 61 aa11.14□□□□□ -0.63
CTU1-201ENST00000421832 LUZP6Q538Z0 58 aa11.07□□□□□ -0.64
CTU1-201ENST00000421832 KRTAP10-10P60014 251 aa11.06□□□□□ -0.64
CTU1-201ENST00000421832 R4GN34 69 aa10.97□□□□□ -0.65
CTU1-201ENST00000421832 PP632Q6XCG6 107 aa10.93□□□□□ -0.66
CTU1-201ENST00000421832 KRTAP19-1Q8IUB9 90 aa10.85□□□□□ -0.67
CTU1-201ENST00000421832 KRTAP9-3Q9BYQ3 159 aa10.85□□□□□ -0.67
CTU1-201ENST00000421832 SPRR2GQ9BYE4 73 aa10.8□□□□□ -0.68
CTU1-201ENST00000421832 LCE2BO14633 110 aa10.62□□□□□ -0.71
CTU1-201ENST00000421832 KRTAP19-8Q3LI54 63 aa10.56□□□□□ -0.72
CTU1-201ENST00000421832 MT1BP07438 61 aa10.49□□□□□ -0.73
CTU1-201ENST00000421832 USH2AO75445 5202 aa10.49□□□□□ -0.73
CTU1-201ENST00000421832 KRTAP23-1A1A580 65 aa10.48□□□□□ -0.73
CTU1-201ENST00000421832 CAMK2N1Q7Z7J9 78 aa10.46□□□□□ -0.73
CTU1-201ENST00000421832 SPRR5A0A1B0GTR4 108 aa10.42□□□□□ -0.74
CTU1-201ENST00000421832 LCE2DQ5TA82 110 aaPredicted RBP10.38□□□□□ -0.75
CTU1-201ENST00000421832 TNP1P09430 55 aa10.24□□□□□ -0.77
CTU1-201ENST00000421832 FSIP2Q5CZC0 6907 aa10.22□□□□□ -0.77
CTU1-201ENST00000421832 SSPOA2VEC9 5147 aa10.21□□□□□ -0.78
CTU1-201ENST00000421832 KRTAP9-2Q9BYQ4 174 aa10.18□□□□□ -0.78
CTU1-201ENST00000421832 MT1XP80297 61 aa10.1□□□□□ -0.79
CTU1-201ENST00000421832 KRTAP10-5P60370 271 aa10.06□□□□□ -0.8
CTU1-201ENST00000421832 PRO2289Q9P1D8 64 aa9.96□□□□□ -0.81
CTU1-201ENST00000421832 KRTAP19-6Q3LI70 58 aa9.95□□□□□ -0.82
CTU1-201ENST00000421832 INE1O15225 51 aa9.81□□□□□ -0.84
CTU1-201ENST00000421832 FCGBPQ9Y6R7 5405 aaPredicted RBP9.78□□□□□ -0.84
CTU1-201ENST00000421832 CRCT1Q9UGL9 99 aa9.76□□□□□ -0.85
CTU1-201ENST00000421832 KRTAP10-7P60409 375 aaPredicted RBP9.7□□□□□ -0.86
CTU1-201ENST00000421832 KRTAP9-6A0A140TA67 174 aa9.68□□□□□ -0.86
CTU1-201ENST00000421832 KMT2DO14686 5537 aa9.54□□□□□ -0.88
CTU1-201ENST00000421832 KRTAP10-12P60413 245 aa9.54□□□□□ -0.88
CTU1-201ENST00000421832 LCE3AQ5TA76 89 aa9.51□□□□□ -0.89
CTU1-201ENST00000421832 KRTAP8-1Q8IUC2 63 aa9.42□□□□□ -0.9
CTU1-201ENST00000421832 KRTAP4-8A0A0G2JLE6 195 aa9.41□□□□□ -0.9
CTU1-201ENST00000421832 KRTAP4-8Q9BYQ9 185 aa9.41□□□□□ -0.9
CTU1-201ENST00000421832 MACF1Q9UPN3 7388 aaKnown RBP9.29□□□□□ -0.92
CTU1-201ENST00000421832 KRTAP12-3P60328 96 aa9.08□□□□□ -0.96
CTU1-201ENST00000421832 SYNE2Q8WXH0 6885 aaKnown RBP9.06□□□□□ -0.96
CTU1-201ENST00000421832 KRTAP19-5Q3LI72 72 aa9.06□□□□□ -0.96
CTU1-201ENST00000421832 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.05□□□□□ -0.96
CTU1-201ENST00000421832 KRTAP19-7Q3SYF9 63 aa9.01□□□□□ -0.97
CTU1-201ENST00000421832 MUC12Q9UKN1 5478 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms