RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 A0A087WVE0 104 aa7.42□□□□□ -1.22
LINC00404-201ENST00000418660 KLKP1Q107X0 134 aa7.41□□□□□ -1.22
LINC00404-201ENST00000418660 PCP4P48539 62 aa7.39□□□□□ -1.23
LINC00404-201ENST00000418660 KRTAP19-8Q3LI54 63 aa7.39□□□□□ -1.23
LINC00404-201ENST00000418660 MT1BP07438 61 aa7.38□□□□□ -1.23
LINC00404-201ENST00000418660 Q5VV11 94 aa7.38□□□□□ -1.23
LINC00404-201ENST00000418660 J3QR89 54 aa7.36□□□□□ -1.23
LINC00404-201ENST00000418660 NDUFC1O43677 76 aa7.33□□□□□ -1.24
LINC00404-201ENST00000418660 LINC00208Q96KT6 92 aa7.33□□□□□ -1.24
LINC00404-201ENST00000418660 IMUPQ9GZP8 106 aa7.33□□□□□ -1.24
LINC00404-201ENST00000418660 A8MUN3 132 aa7.32□□□□□ -1.24
LINC00404-201ENST00000418660 OCR1Q9BZK8 76 aa7.32□□□□□ -1.24
LINC00404-201ENST00000418660 CRIPTQ9P021 101 aa7.32□□□□□ -1.24
LINC00404-201ENST00000418660 SYNE2Q8WXH0 6885 aaKnown RBP7.32□□□□□ -1.24
LINC00404-201ENST00000418660 A6NN06 94 aa7.3□□□□□ -1.24
LINC00404-201ENST00000418660 MP68P56378 58 aa7.29□□□□□ -1.24
LINC00404-201ENST00000418660 KRTAP6-3Q3LI67 103 aa7.28□□□□□ -1.24
LINC00404-201ENST00000418660 H0YAA0 97 aa7.27□□□□□ -1.25
LINC00404-201ENST00000418660 SCGB1A1P11684 91 aa7.27□□□□□ -1.25
LINC00404-201ENST00000418660 KRTAP10-5P60370 271 aa7.22□□□□□ -1.25
LINC00404-201ENST00000418660 H3BPC8 53 aa7.2□□□□□ -1.26
LINC00404-201ENST00000418660 ADM2Q7Z4H4 148 aa7.18□□□□□ -1.26
LINC00404-201ENST00000418660 DMAC1Q96GE9 116 aa7.1□□□□□ -1.27
LINC00404-201ENST00000418660 C20orf197Q8N268 126 aa7.02□□□□□ -1.29
LINC00404-201ENST00000418660 P0C880 135 aa7.01□□□□□ -1.29
LINC00404-201ENST00000418660 R4GN34 69 aa7□□□□□ -1.29
LINC00404-201ENST00000418660 MT-ATP8P03928 68 aa6.99□□□□□ -1.29
LINC00404-201ENST00000418660 SMIM20Q8N5G0 67 aa6.97□□□□□ -1.29
LINC00404-201ENST00000418660 PLAC4Q8WY50 150 aa6.97□□□□□ -1.29
LINC00404-201ENST00000418660 TRAV7A0A075B6U4 112 aa6.96□□□□□ -1.3
LINC00404-201ENST00000418660 PRO2289Q9P1D8 64 aa6.96□□□□□ -1.3
LINC00404-201ENST00000418660 M0QZ58 72 aa6.94□□□□□ -1.3
LINC00404-201ENST00000418660 ACYP2P14621 99 aa6.94□□□□□ -1.3
LINC00404-201ENST00000418660 KRTAP5-9P26371 169 aa6.94□□□□□ -1.3
LINC00404-201ENST00000418660 MT1XP80297 61 aa6.92□□□□□ -1.3
LINC00404-201ENST00000418660 ANAPC13Q9BS18 74 aa6.91□□□□□ -1.3
LINC00404-201ENST00000418660 NEBP20929 6669 aa6.89□□□□□ -1.31
LINC00404-201ENST00000418660 SPTSSBQ8NFR3 76 aa6.86□□□□□ -1.31
LINC00404-201ENST00000418660 LINC01554Q52M75 96 aa6.83□□□□□ -1.32
LINC00404-201ENST00000418660 MUC12Q9UKN1 5478 aa6.82□□□□□ -1.32
LINC00404-201ENST00000418660 SNURFQ9Y675 71 aa6.81□□□□□ -1.32
LINC00404-201ENST00000418660 CHKB-CPT1BH3BT56 60 aa6.79□□□□□ -1.32
LINC00404-201ENST00000418660 KRTAP12-2P59991 146 aa6.77□□□□□ -1.33
LINC00404-201ENST00000418660 KMT2DO14686 5537 aa6.74□□□□□ -1.33
LINC00404-201ENST00000418660 SPANXA2-OT1Q8N9U9 137 aa6.74□□□□□ -1.33
LINC00404-201ENST00000418660 KRTAP20-1Q3LI63 56 aa6.73□□□□□ -1.33
LINC00404-201ENST00000418660 SERP2Q8N6R1 65 aa6.72□□□□□ -1.33
LINC00404-201ENST00000418660 SPRR2FQ96RM1 72 aa6.72□□□□□ -1.33
LINC00404-201ENST00000418660 KRTAP8-1Q8IUC2 63 aa6.71□□□□□ -1.34
LINC00404-201ENST00000418660 CCDC179H3BU77 68 aa6.65□□□□□ -1.34
LINC00404-201ENST00000418660 SPRR2EP22531 72 aa6.63□□□□□ -1.35
LINC00404-201ENST00000418660 SPRR2BP35325 72 aa6.63□□□□□ -1.35
LINC00404-201ENST00000418660 SPRR2AP35326 72 aa6.63□□□□□ -1.35
LINC00404-201ENST00000418660 KRTAP4-8A0A0G2JLE6 195 aa6.62□□□□□ -1.35
LINC00404-201ENST00000418660 COX7CP15954 63 aa6.62□□□□□ -1.35
LINC00404-201ENST00000418660 SVIPQ8NHG7 77 aa6.62□□□□□ -1.35
LINC00404-201ENST00000418660 KRTAP4-8Q9BYQ9 185 aa6.62□□□□□ -1.35
LINC00404-201ENST00000418660 MDN1Q9NU22 5596 aa6.62□□□□□ -1.35
LINC00404-201ENST00000418660 KRTAP10-7P60409 375 aaPredicted RBP6.6□□□□□ -1.35
LINC00404-201ENST00000418660 KRTAP10-12P60413 245 aa6.58□□□□□ -1.36
LINC00404-201ENST00000418660 KRTAP2-3P0C7H8 128 aa6.57□□□□□ -1.36
LINC00404-201ENST00000418660 KRTAP2-4Q9BYR9 128 aa6.57□□□□□ -1.36
LINC00404-201ENST00000418660 TMEM258P61165 79 aa6.55□□□□□ -1.36
LINC00404-201ENST00000418660 LCE1AQ5T7P2 110 aa6.55□□□□□ -1.36
LINC00404-201ENST00000418660 KRTAP13-4Q3LI77 160 aa6.54□□□□□ -1.36
LINC00404-201ENST00000418660 COA5Q86WW8 74 aa6.54□□□□□ -1.36
LINC00404-201ENST00000418660 RPS28P62857 69 aaKnown RBP6.51□□□□□ -1.37
LINC00404-201ENST00000418660 SEC61GP60059 68 aa6.45□□□□□ -1.38
LINC00404-201ENST00000418660 CAMK2N1Q7Z7J9 78 aa6.44□□□□□ -1.38
LINC00404-201ENST00000418660 SERP1Q9Y6X1 66 aa6.43□□□□□ -1.38
LINC00404-201ENST00000418660 ATP5EP56381 51 aaPredicted RBP6.42□□□□□ -1.38
LINC00404-201ENST00000418660 SPRR2DP22532 72 aa6.41□□□□□ -1.38
LINC00404-201ENST00000418660 H7BZZ5 65 aa6.4□□□□□ -1.38
LINC00404-201ENST00000418660 CYSTM1Q9H1C7 97 aa6.38□□□□□ -1.39
LINC00404-201ENST00000418660 KRTAP2-2Q9BYT5 123 aa6.36□□□□□ -1.39
LINC00404-201ENST00000418660 KRTAP2-1Q9BYU5 128 aa6.36□□□□□ -1.39
LINC00404-201ENST00000418660 A0A0D9SG42 100 aa6.34□□□□□ -1.39
LINC00404-201ENST00000418660 A0A1B0GU33 70 aa6.33□□□□□ -1.4
LINC00404-201ENST00000418660 SPATA8Q6RVD6 105 aa6.33□□□□□ -1.4
LINC00404-201ENST00000418660 SPINT4Q6UDR6 99 aa6.26□□□□□ -1.41
LINC00404-201ENST00000418660 LCE3BQ5TA77 95 aa6.24□□□□□ -1.41
LINC00404-201ENST00000418660 SMIM26A0A096LP01 95 aa6.23□□□□□ -1.41
LINC00404-201ENST00000418660 KRTAP12-1P59990 96 aa6.22□□□□□ -1.41
LINC00404-201ENST00000418660 A0A1B0GU69 56 aa6.21□□□□□ -1.42
LINC00404-201ENST00000418660 KRTAP19-7Q3SYF9 63 aa6.19□□□□□ -1.42
LINC00404-201ENST00000418660 MT1EP04732 61 aa6.14□□□□□ -1.43
LINC00404-201ENST00000418660 LCE5AQ5TCM9 118 aa6.1□□□□□ -1.43
LINC00404-201ENST00000418660 A8MU10 97 aa6.09□□□□□ -1.43
LINC00404-201ENST00000418660 KRTAP19-3Q7Z4W3 81 aa6.09□□□□□ -1.43
LINC00404-201ENST00000418660 PRO0628Q9UI54 55 aa6.06□□□□□ -1.44
LINC00404-201ENST00000418660 V9GYY9 64 aa6.05□□□□□ -1.44
LINC00404-201ENST00000418660 KRTAP19-5Q3LI72 72 aa6.03□□□□□ -1.44
LINC00404-201ENST00000418660 PRR15LQ9BU68 103 aa6.03□□□□□ -1.44
LINC00404-201ENST00000418660 Q1T7F1 81 aa5.98□□□□□ -1.45
LINC00404-201ENST00000418660 LINC01558Q9Y6Z2 57 aa5.97□□□□□ -1.45
LINC00404-201ENST00000418660 MT1GP13640 62 aa5.96□□□□□ -1.46
LINC00404-201ENST00000418660 C10orf95Q9H7T3 257 aa5.95□□□□□ -1.46
LINC00404-201ENST00000418660 TNP1P09430 55 aa5.94□□□□□ -1.46
LINC00404-201ENST00000418660 DSTQ03001 7570 aaKnown RBP5.93□□□□□ -1.46
LINC00404-201ENST00000418660 BRK1Q8WUW1 75 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms