RNA–Protein interactions for RNA: ENST00000418224.7

PMS1-206, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 3,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-206ENST00000418224 KRTAP10-6P60371 365 aaPredicted RBP9.09□□□□□ -0.95
PMS1-206ENST00000418224 SACSQ9NZJ4 4579 aa9.08□□□□□ -0.96
PMS1-206ENST00000418224 DYNC1H1Q14204 4646 aaKnown RBP9.05□□□□□ -0.96
PMS1-206ENST00000418224 KRTAP10-4P60372 401 aaPredicted RBP8.97□□□□□ -0.97
PMS1-206ENST00000418224 S4R3F8 94 aa8.97□□□□□ -0.97
PMS1-206ENST00000418224 KRTAP3-2Q9BYR7 98 aa8.95□□□□□ -0.98
PMS1-206ENST00000418224 KRTAP3-3Q9BYR6 98 aa8.94□□□□□ -0.98
PMS1-206ENST00000418224 KRTAP12-2P59991 146 aa8.93□□□□□ -0.98
PMS1-206ENST00000418224 A0A0A0MQY5 61 aa8.91□□□□□ -0.98
PMS1-206ENST00000418224 PKHD1L1Q86WI1 4243 aa8.91□□□□□ -0.98
PMS1-206ENST00000418224 APOBP04114 4563 aaKnown RBP8.9□□□□□ -0.98
PMS1-206ENST00000418224 A0A1B0GVY2 172 aa8.87□□□□□ -0.99
PMS1-206ENST00000418224 LRP1Q07954 4544 aaKnown RBP8.77□□□□□ -1
PMS1-206ENST00000418224 KRTAP10-8P60410 259 aa8.77□□□□□ -1.01
PMS1-206ENST00000418224 KRTAP12-1P59990 96 aa8.77□□□□□ -1.01
PMS1-206ENST00000418224 FAT3Q8TDW7 4589 aa8.74□□□□□ -1.01
PMS1-206ENST00000418224 XP32Q5T750 250 aa8.72□□□□□ -1.01
PMS1-206ENST00000418224 HSPG2P98160 4391 aa8.71□□□□□ -1.01
PMS1-206ENST00000418224 MYCBP2O75592 4640 aa8.71□□□□□ -1.02
PMS1-206ENST00000418224 LUZP6Q538Z0 58 aa8.66□□□□□ -1.02
PMS1-206ENST00000418224 Q5VSD8 79 aa8.63□□□□□ -1.03
PMS1-206ENST00000418224 TNXBP22105 4242 aa8.6□□□□□ -1.03
PMS1-206ENST00000418224 RYR2Q92736 4967 aa8.57□□□□□ -1.04
PMS1-206ENST00000418224 KMT2CQ8NEZ4 4911 aaKnown RBP8.53□□□□□ -1.04
PMS1-206ENST00000418224 PLAC4Q8WY50 150 aa8.53□□□□□ -1.04
PMS1-206ENST00000418224 M0QZ58 72 aa8.46□□□□□ -1.06
PMS1-206ENST00000418224 KRTAP21-3Q3LHN1 58 aa8.43□□□□□ -1.06
PMS1-206ENST00000418224 LPAP08519 4548 aa8.4□□□□□ -1.07
PMS1-206ENST00000418224 KRTAP17-1Q9BYP8 105 aa8.37□□□□□ -1.07
PMS1-206ENST00000418224 MT1HL1P0DM35 61 aa8.35□□□□□ -1.07
PMS1-206ENST00000418224 LRP2P98164 4655 aa8.35□□□□□ -1.07
PMS1-206ENST00000418224 RYR1P21817 5038 aa8.31□□□□□ -1.08
PMS1-206ENST00000418224 KIAA1109Q2LD37 5005 aa8.29□□□□□ -1.08
PMS1-206ENST00000418224 R4GN34 69 aa8.28□□□□□ -1.08
PMS1-206ENST00000418224 RYR3Q15413 4870 aa8.22□□□□□ -1.09
PMS1-206ENST00000418224 LORP23490 312 aaPredicted RBP8.08□□□□□ -1.12
PMS1-206ENST00000418224 ABCA13Q86UQ4 5058 aa8.04□□□□□ -1.12
PMS1-206ENST00000418224 CAMK2N1Q7Z7J9 78 aa7.99□□□□□ -1.13
PMS1-206ENST00000418224 PP632Q6XCG6 107 aa7.98□□□□□ -1.13
PMS1-206ENST00000418224 SEC61BP60468 96 aaKnown RBP7.96□□□□□ -1.13
PMS1-206ENST00000418224 KRTAP4-5Q9BYR2 181 aa7.92□□□□□ -1.14
PMS1-206ENST00000418224 EPPK1P58107 5090 aaKnown RBP7.9□□□□□ -1.14
PMS1-206ENST00000418224 KRTAP4-1Q9BYQ7 146 aa7.89□□□□□ -1.15
PMS1-206ENST00000418224 MUC17Q685J3 4493 aa7.84□□□□□ -1.15
PMS1-206ENST00000418224 J3QL48 77 aa7.76□□□□□ -1.17
PMS1-206ENST00000418224 TNP1P09430 55 aa7.66□□□□□ -1.18
PMS1-206ENST00000418224 KRTAP19-2Q3LHN2 52 aa7.65□□□□□ -1.18
PMS1-206ENST00000418224 SPRR5A0A1B0GTR4 108 aa7.64□□□□□ -1.19
PMS1-206ENST00000418224 MUC2Q02817 5179 aa7.63□□□□□ -1.19
PMS1-206ENST00000418224 HERC2O95714 4834 aa7.53□□□□□ -1.2
PMS1-206ENST00000418224 PRO2289Q9P1D8 64 aa7.51□□□□□ -1.21
PMS1-206ENST00000418224 FLGP20930 4061 aaPredicted RBP7.44□□□□□ -1.22
PMS1-206ENST00000418224 KRTAP23-1A1A580 65 aa7.42□□□□□ -1.22
PMS1-206ENST00000418224 PCLOQ9Y6V0 5065 aa7.34□□□□□ -1.23
PMS1-206ENST00000418224 BIRC6Q9NR09 4857 aa7.31□□□□□ -1.24
PMS1-206ENST00000418224 FAT4Q6V0I7 4981 aa7.25□□□□□ -1.25
PMS1-206ENST00000418224 INE1O15225 51 aa7.25□□□□□ -1.25
PMS1-206ENST00000418224 HERC1Q15751 4861 aa7.25□□□□□ -1.25
PMS1-206ENST00000418224 LCE3AQ5TA76 89 aa7.22□□□□□ -1.25
PMS1-206ENST00000418224 M0R2T5 61 aa7.22□□□□□ -1.25
PMS1-206ENST00000418224 SPRR2GQ9BYE4 73 aa7.15□□□□□ -1.27
PMS1-206ENST00000418224 LCE2CQ5TA81 110 aa7.14□□□□□ -1.27
PMS1-206ENST00000418224 KRTAP19-1Q8IUB9 90 aa7.14□□□□□ -1.27
PMS1-206ENST00000418224 HMCN2Q8NDA2 5059 aa7.07□□□□□ -1.28
PMS1-206ENST00000418224 KRTAP10-10P60014 251 aa7.04□□□□□ -1.28
PMS1-206ENST00000418224 RNF213Q63HN8 5207 aa6.98□□□□□ -1.29
PMS1-206ENST00000418224 MT1HP80294 61 aa6.97□□□□□ -1.29
PMS1-206ENST00000418224 MT1FP04733 61 aa6.96□□□□□ -1.29
PMS1-206ENST00000418224 MT2AP02795 61 aa6.93□□□□□ -1.3
PMS1-206ENST00000418224 KRTAP8-1Q8IUC2 63 aa6.89□□□□□ -1.31
PMS1-206ENST00000418224 UBR4Q5T4S7 5183 aa6.86□□□□□ -1.31
PMS1-206ENST00000418224 KRTAP9-8Q9BYQ0 159 aa6.82□□□□□ -1.32
PMS1-206ENST00000418224 KRTAP12-3P60328 96 aa6.82□□□□□ -1.32
PMS1-206ENST00000418224 KRTAP10-5P60370 271 aa6.76□□□□□ -1.33
PMS1-206ENST00000418224 KRTAP19-8Q3LI54 63 aa6.76□□□□□ -1.33
PMS1-206ENST00000418224 MT1XP80297 61 aa6.75□□□□□ -1.33
PMS1-206ENST00000418224 KRTAP10-12P60413 245 aa6.75□□□□□ -1.33
PMS1-206ENST00000418224 MT1BP07438 61 aa6.74□□□□□ -1.33
PMS1-206ENST00000418224 KRTAP10-7P60409 375 aaPredicted RBP6.64□□□□□ -1.35
PMS1-206ENST00000418224 KRTAP9-3Q9BYQ3 159 aa6.52□□□□□ -1.37
PMS1-206ENST00000418224 LCE3CQ5T5A8 94 aa6.41□□□□□ -1.38
PMS1-206ENST00000418224 KRTAP19-5Q3LI72 72 aa6.4□□□□□ -1.39
PMS1-206ENST00000418224 KMT2DO14686 5537 aa6.33□□□□□ -1.4
PMS1-206ENST00000418224 USH2AO75445 5202 aa6.32□□□□□ -1.4
PMS1-206ENST00000418224 KRTAP9-6A8MVA2 160 aa6.31□□□□□ -1.4
PMS1-206ENST00000418224 LCE2BO14633 110 aa6.27□□□□□ -1.41
PMS1-206ENST00000418224 KRTAP4-8A0A0G2JLE6 195 aa6.23□□□□□ -1.41
PMS1-206ENST00000418224 KRTAP4-8Q9BYQ9 185 aa6.23□□□□□ -1.41
PMS1-206ENST00000418224 KRTAP2-3P0C7H8 128 aa6.17□□□□□ -1.42
PMS1-206ENST00000418224 KRTAP2-4Q9BYR9 128 aa6.17□□□□□ -1.42
PMS1-206ENST00000418224 KRTAP2-1Q9BYU5 128 aa6.17□□□□□ -1.42
PMS1-206ENST00000418224 KRTAP4-7Q9BYR0 210 aa6.13□□□□□ -1.43
PMS1-206ENST00000418224 KRTAP19-7Q3SYF9 63 aa6□□□□□ -1.45
PMS1-206ENST00000418224 LCE2AQ5TA79 106 aaPredicted RBP5.9□□□□□ -1.46
PMS1-206ENST00000418224 FSIP2Q5CZC0 6907 aa5.9□□□□□ -1.47
PMS1-206ENST00000418224 MT1LQ93083 61 aa5.85□□□□□ -1.47
PMS1-206ENST00000418224 MT1EP04732 61 aa5.82□□□□□ -1.48
PMS1-206ENST00000418224 KRTAP12-4P60329 112 aa5.77□□□□□ -1.49
PMS1-206ENST00000418224 KRTAP19-4Q3LI73 84 aa5.7□□□□□ -1.5
PMS1-206ENST00000418224 LOC100996750A0A140TA64 210 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms