RNA–Protein interactions for RNA: ENST00000416774.1

LINC01342-201, Transcript of long intergenic non-protein coding RNA 1342, humanhuman

TSL 1 (best) BASIC

Gene LINC01342, Length 1,620 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01342-201ENST00000416774 SEC61BP60468 96 aaKnown RBP12.04□□□□□ -0.48
LINC01342-201ENST00000416774 BRK1Q8WUW1 75 aa12.04□□□□□ -0.48
LINC01342-201ENST00000416774 PRO0628Q9UI54 55 aa12□□□□□ -0.49
LINC01342-201ENST00000416774 A6NED7 52 aa11.95□□□□□ -0.5
LINC01342-201ENST00000416774 RBM12B-AS1Q9P1G2 102 aa11.93□□□□□ -0.5
LINC01342-201ENST00000416774 SEC61GP60059 68 aa11.92□□□□□ -0.5
LINC01342-201ENST00000416774 RNF213Q63HN8 5207 aa11.91□□□□□ -0.5
LINC01342-201ENST00000416774 H1FX-AS1Q4G0G2 97 aa11.9□□□□□ -0.5
LINC01342-201ENST00000416774 S4R3F8 94 aa11.86□□□□□ -0.51
LINC01342-201ENST00000416774 CDC42SE1Q9NRR8 79 aa11.84□□□□□ -0.51
LINC01342-201ENST00000416774 LCA10Q71F78 164 aa11.82□□□□□ -0.52
LINC01342-201ENST00000416774 KRTAP3-3Q9BYR6 98 aa11.82□□□□□ -0.52
LINC01342-201ENST00000416774 MUC17Q685J3 4493 aa11.79□□□□□ -0.52
LINC01342-201ENST00000416774 UQCR11O14957 56 aa11.77□□□□□ -0.53
LINC01342-201ENST00000416774 SVIPQ8NHG7 77 aa11.74□□□□□ -0.53
LINC01342-201ENST00000416774 MUC2Q02817 5179 aa11.74□□□□□ -0.53
LINC01342-201ENST00000416774 SPATA8Q6RVD6 105 aa11.7□□□□□ -0.54
LINC01342-201ENST00000416774 A8MU10 97 aa11.68□□□□□ -0.54
LINC01342-201ENST00000416774 KRTAP4-1Q9BYQ7 146 aa11.66□□□□□ -0.54
LINC01342-201ENST00000416774 MIR22HGQ0VDD5 57 aa11.64□□□□□ -0.55
LINC01342-201ENST00000416774 A0A1B0GU33 70 aa11.6□□□□□ -0.55
LINC01342-201ENST00000416774 CSAG1Q6PB30 78 aa11.59□□□□□ -0.55
LINC01342-201ENST00000416774 KRTAP10-6P60371 365 aaPredicted RBP11.5□□□□□ -0.57
LINC01342-201ENST00000416774 KRTAP3-2Q9BYR7 98 aa11.49□□□□□ -0.57
LINC01342-201ENST00000416774 KRTAP19-2Q3LHN2 52 aa11.46□□□□□ -0.57
LINC01342-201ENST00000416774 H0YAA0 97 aa11.42□□□□□ -0.58
LINC01342-201ENST00000416774 PMAIP1Q13794 54 aa11.42□□□□□ -0.58
LINC01342-201ENST00000416774 FAT4Q6V0I7 4981 aa11.36□□□□□ -0.59
LINC01342-201ENST00000416774 ADM2Q7Z4H4 148 aa11.35□□□□□ -0.59
LINC01342-201ENST00000416774 A6NN06 94 aa11.33□□□□□ -0.6
LINC01342-201ENST00000416774 P0C880 135 aa11.31□□□□□ -0.6
LINC01342-201ENST00000416774 LCE2AQ5TA79 106 aaPredicted RBP11.27□□□□□ -0.6
LINC01342-201ENST00000416774 LCE2CQ5TA81 110 aa11.26□□□□□ -0.61
LINC01342-201ENST00000416774 KRTAP13-4Q3LI77 160 aa11.19□□□□□ -0.62
LINC01342-201ENST00000416774 M0QZ58 72 aa11.17□□□□□ -0.62
LINC01342-201ENST00000416774 FLGP20930 4061 aaPredicted RBP11.11□□□□□ -0.63
LINC01342-201ENST00000416774 K7ERS5 55 aa11.1□□□□□ -0.63
LINC01342-201ENST00000416774 MT1HP80294 61 aa11.1□□□□□ -0.63
LINC01342-201ENST00000416774 KTN1-AS1Q86SY8 53 aa11.06□□□□□ -0.64
LINC01342-201ENST00000416774 LCE2DQ5TA82 110 aaPredicted RBP11□□□□□ -0.65
LINC01342-201ENST00000416774 A0A0D9SG42 100 aa10.98□□□□□ -0.65
LINC01342-201ENST00000416774 M0R2T5 61 aa10.95□□□□□ -0.66
LINC01342-201ENST00000416774 R4GN34 69 aa10.95□□□□□ -0.66
LINC01342-201ENST00000416774 LORP23490 312 aaPredicted RBP10.83□□□□□ -0.68
LINC01342-201ENST00000416774 CRIPTQ9P021 101 aa10.83□□□□□ -0.68
LINC01342-201ENST00000416774 KRTAP12-1P59990 96 aa10.82□□□□□ -0.68
LINC01342-201ENST00000416774 KRTAP12-2P59991 146 aa10.78□□□□□ -0.68
LINC01342-201ENST00000416774 SPINT4Q6UDR6 99 aa10.73□□□□□ -0.69
LINC01342-201ENST00000416774 LINC01554Q52M75 96 aa10.69□□□□□ -0.7
LINC01342-201ENST00000416774 ROMO1P60602 79 aa10.67□□□□□ -0.7
LINC01342-201ENST00000416774 KRTAP9-2Q9BYQ4 174 aa10.66□□□□□ -0.7
LINC01342-201ENST00000416774 PRAC1Q96KF2 57 aa10.59□□□□□ -0.71
LINC01342-201ENST00000416774 KRTAP9-8Q9BYQ0 159 aa10.56□□□□□ -0.72
LINC01342-201ENST00000416774 SPRR2GQ9BYE4 73 aa10.47□□□□□ -0.73
LINC01342-201ENST00000416774 MT2AP02795 61 aa10.46□□□□□ -0.74
LINC01342-201ENST00000416774 MT1FP04733 61 aa10.39□□□□□ -0.75
LINC01342-201ENST00000416774 KRTAP10-10P60014 251 aa10.38□□□□□ -0.75
LINC01342-201ENST00000416774 KRTAP25-1Q3LHN0 102 aa10.36□□□□□ -0.75
LINC01342-201ENST00000416774 KRTAP19-1Q8IUB9 90 aa10.36□□□□□ -0.75
LINC01342-201ENST00000416774 CAMK2N1Q7Z7J9 78 aa10.28□□□□□ -0.76
LINC01342-201ENST00000416774 KRTAP9-3Q9BYQ3 159 aa10.22□□□□□ -0.77
LINC01342-201ENST00000416774 C10orf95Q9H7T3 257 aa10.22□□□□□ -0.77
LINC01342-201ENST00000416774 PLAC4Q8WY50 150 aa10.18□□□□□ -0.78
LINC01342-201ENST00000416774 KRTAP9-6A0A140TA67 174 aa10.16□□□□□ -0.78
LINC01342-201ENST00000416774 KRTAP19-8Q3LI54 63 aa10.15□□□□□ -0.78
LINC01342-201ENST00000416774 CRCT1Q9UGL9 99 aa10.14□□□□□ -0.79
LINC01342-201ENST00000416774 FSIP2Q5CZC0 6907 aa10.12□□□□□ -0.79
LINC01342-201ENST00000416774 LCE2BO14633 110 aa10.09□□□□□ -0.79
LINC01342-201ENST00000416774 USH2AO75445 5202 aa9.98□□□□□ -0.81
LINC01342-201ENST00000416774 MT1BP07438 61 aa9.93□□□□□ -0.82
LINC01342-201ENST00000416774 TNP1P09430 55 aa9.88□□□□□ -0.83
LINC01342-201ENST00000416774 PP632Q6XCG6 107 aa9.83□□□□□ -0.84
LINC01342-201ENST00000416774 SSPOA2VEC9 5147 aa9.79□□□□□ -0.84
LINC01342-201ENST00000416774 KRTAP23-1A1A580 65 aa9.78□□□□□ -0.84
LINC01342-201ENST00000416774 KRTAP10-5P60370 271 aa9.67□□□□□ -0.86
LINC01342-201ENST00000416774 MT1XP80297 61 aa9.67□□□□□ -0.86
LINC01342-201ENST00000416774 KRTAP19-6Q3LI70 58 aa9.65□□□□□ -0.86
LINC01342-201ENST00000416774 PRO2289Q9P1D8 64 aa9.6□□□□□ -0.87
LINC01342-201ENST00000416774 FCGBPQ9Y6R7 5405 aaPredicted RBP9.56□□□□□ -0.88
LINC01342-201ENST00000416774 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.42□□□□□ -0.9
LINC01342-201ENST00000416774 LCE3AQ5TA76 89 aa9.34□□□□□ -0.91
LINC01342-201ENST00000416774 KRTAP10-12P60413 245 aa9.3□□□□□ -0.92
LINC01342-201ENST00000416774 KRTAP10-7P60409 375 aaPredicted RBP9.27□□□□□ -0.92
LINC01342-201ENST00000416774 KRTAP15-1Q3LI76 137 aa9.25□□□□□ -0.93
LINC01342-201ENST00000416774 KRTAP8-1Q8IUC2 63 aa9.25□□□□□ -0.93
LINC01342-201ENST00000416774 KRTAP9-7A8MTY7 169 aa9.18□□□□□ -0.94
LINC01342-201ENST00000416774 MACF1Q9UPN3 7388 aaKnown RBP9.16□□□□□ -0.94
LINC01342-201ENST00000416774 KRTAP12-3P60328 96 aa8.99□□□□□ -0.97
LINC01342-201ENST00000416774 SYNE2Q8WXH0 6885 aaKnown RBP8.98□□□□□ -0.97
LINC01342-201ENST00000416774 KRTAP6-3Q3LI67 103 aa8.92□□□□□ -0.98
LINC01342-201ENST00000416774 LOC100996750A0A140TA64 210 aa8.9□□□□□ -0.99
LINC01342-201ENST00000416774 KRTAP4-6Q9BYQ5 205 aa8.9□□□□□ -0.99
LINC01342-201ENST00000416774 SPRR5A0A1B0GTR4 108 aa8.82□□□□□ -1
LINC01342-201ENST00000416774 KRTAP4-8A0A0G2JLE6 195 aa8.8□□□□□ -1
LINC01342-201ENST00000416774 KRTAP19-5Q3LI72 72 aa8.8□□□□□ -1
LINC01342-201ENST00000416774 KRTAP4-8Q9BYQ9 185 aa8.8□□□□□ -1
LINC01342-201ENST00000416774 KMT2DO14686 5537 aa8.68□□□□□ -1.02
LINC01342-201ENST00000416774 KRTAP5-9P26371 169 aa8.66□□□□□ -1.02
LINC01342-201ENST00000416774 LUZP6Q538Z0 58 aa8.65□□□□□ -1.02
LINC01342-201ENST00000416774 KRTAP19-7Q3SYF9 63 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms