RNA–Protein interactions for RNA: ENST00000416108.5

RBM39-208, Transcript of RNA binding motif protein 39, humanhuman

TSL 4

Gene RBM39, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-208ENST00000416108 LCE2CQ5TA81 110 aa4.13□□□□□ -1.75
RBM39-208ENST00000416108 COA5Q86WW8 74 aa4.13□□□□□ -1.75
RBM39-208ENST00000416108 LCA10Q71F78 164 aa4.12□□□□□ -1.75
RBM39-208ENST00000416108 MUC2Q02817 5179 aa4.12□□□□□ -1.75
RBM39-208ENST00000416108 MT1HP80294 61 aa4.1□□□□□ -1.75
RBM39-208ENST00000416108 CSAG1Q6PB30 78 aa4.1□□□□□ -1.75
RBM39-208ENST00000416108 SERP1Q9Y6X1 66 aa4.08□□□□□ -1.76
RBM39-208ENST00000416108 FAT4Q6V0I7 4981 aa4.07□□□□□ -1.76
RBM39-208ENST00000416108 KRTAP3-3Q9BYR6 98 aa4.07□□□□□ -1.76
RBM39-208ENST00000416108 KRTAP3-2Q9BYR7 98 aa4.07□□□□□ -1.76
RBM39-208ENST00000416108 FLGP20930 4061 aaPredicted RBP4.06□□□□□ -1.76
RBM39-208ENST00000416108 LCE2AQ5TA79 106 aaPredicted RBP4.01□□□□□ -1.77
RBM39-208ENST00000416108 SEC61GP60059 68 aa4□□□□□ -1.77
RBM39-208ENST00000416108 KRTAP10-6P60371 365 aaPredicted RBP3.98□□□□□ -1.77
RBM39-208ENST00000416108 RPS28P62857 69 aaKnown RBP3.98□□□□□ -1.77
RBM39-208ENST00000416108 H0YAA0 97 aa3.97□□□□□ -1.77
RBM39-208ENST00000416108 SMIM26A0A096LP01 95 aa3.96□□□□□ -1.78
RBM39-208ENST00000416108 ADM2Q7Z4H4 148 aa3.96□□□□□ -1.78
RBM39-208ENST00000416108 A0A1B0GU69 56 aa3.95□□□□□ -1.78
RBM39-208ENST00000416108 PRR15LQ9BU68 103 aa3.95□□□□□ -1.78
RBM39-208ENST00000416108 V9GYY9 64 aa3.95□□□□□ -1.78
RBM39-208ENST00000416108 LORP23490 312 aaPredicted RBP3.94□□□□□ -1.78
RBM39-208ENST00000416108 KRTAP10-10P60014 251 aa3.92□□□□□ -1.78
RBM39-208ENST00000416108 LINC01558Q9Y6Z2 57 aa3.92□□□□□ -1.78
RBM39-208ENST00000416108 MT2AP02795 61 aa3.91□□□□□ -1.78
RBM39-208ENST00000416108 KRTAP9-8Q9BYQ0 159 aa3.9□□□□□ -1.79
RBM39-208ENST00000416108 P0C880 135 aa3.88□□□□□ -1.79
RBM39-208ENST00000416108 Q1T7F1 81 aa3.88□□□□□ -1.79
RBM39-208ENST00000416108 CRIPTQ9P021 101 aa3.88□□□□□ -1.79
RBM39-208ENST00000416108 MT1FP04733 61 aa3.87□□□□□ -1.79
RBM39-208ENST00000416108 R4GN34 69 aa3.86□□□□□ -1.79
RBM39-208ENST00000416108 A0A1B0GU33 70 aa3.84□□□□□ -1.79
RBM39-208ENST00000416108 M0QZ58 72 aa3.84□□□□□ -1.79
RBM39-208ENST00000416108 PSPHP1O15172 72 aa3.84□□□□□ -1.79
RBM39-208ENST00000416108 UQCR11O14957 56 aa3.79□□□□□ -1.8
RBM39-208ENST00000416108 Q5VV11 94 aa3.78□□□□□ -1.8
RBM39-208ENST00000416108 LINC01554Q52M75 96 aa3.77□□□□□ -1.81
RBM39-208ENST00000416108 SPRR2GQ9BYE4 73 aa3.77□□□□□ -1.81
RBM39-208ENST00000416108 KRTAP9-3Q9BYQ3 159 aa3.77□□□□□ -1.81
RBM39-208ENST00000416108 A6NED7 52 aa3.76□□□□□ -1.81
RBM39-208ENST00000416108 SPATA8Q6RVD6 105 aa3.76□□□□□ -1.81
RBM39-208ENST00000416108 KRTAP19-1Q8IUB9 90 aa3.74□□□□□ -1.81
RBM39-208ENST00000416108 MIR22HGQ0VDD5 57 aa3.73□□□□□ -1.81
RBM39-208ENST00000416108 KRTAP13-4Q3LI77 160 aa3.73□□□□□ -1.81
RBM39-208ENST00000416108 A0A0D9SG42 100 aa3.72□□□□□ -1.81
RBM39-208ENST00000416108 PLAC4Q8WY50 150 aa3.7□□□□□ -1.82
RBM39-208ENST00000416108 KRTAP19-8Q3LI54 63 aa3.69□□□□□ -1.82
RBM39-208ENST00000416108 A8MU10 97 aa3.68□□□□□ -1.82
RBM39-208ENST00000416108 LCE2BO14633 110 aa3.68□□□□□ -1.82
RBM39-208ENST00000416108 A6NN06 94 aa3.67□□□□□ -1.82
RBM39-208ENST00000416108 SPINT4Q6UDR6 99 aa3.67□□□□□ -1.82
RBM39-208ENST00000416108 K7ERS5 55 aa3.66□□□□□ -1.82
RBM39-208ENST00000416108 KRTAP9-2Q9BYQ4 174 aa3.65□□□□□ -1.83
RBM39-208ENST00000416108 CDC42SE1Q9NRR8 79 aa3.64□□□□□ -1.83
RBM39-208ENST00000416108 MT1BP07438 61 aa3.63□□□□□ -1.83
RBM39-208ENST00000416108 CAMK2N1Q7Z7J9 78 aa3.62□□□□□ -1.83
RBM39-208ENST00000416108 KRTAP12-1P59990 96 aa3.61□□□□□ -1.83
RBM39-208ENST00000416108 BRK1Q8WUW1 75 aa3.61□□□□□ -1.83
RBM39-208ENST00000416108 KRTAP12-2P59991 146 aa3.59□□□□□ -1.83
RBM39-208ENST00000416108 USH2AO75445 5202 aa3.57□□□□□ -1.84
RBM39-208ENST00000416108 PRO2289Q9P1D8 64 aa3.56□□□□□ -1.84
RBM39-208ENST00000416108 KRTAP19-6Q3LI70 58 aa3.52□□□□□ -1.85
RBM39-208ENST00000416108 CRCT1Q9UGL9 99 aa3.51□□□□□ -1.85
RBM39-208ENST00000416108 KRTAP10-5P60370 271 aa3.5□□□□□ -1.85
RBM39-208ENST00000416108 FSIP2Q5CZC0 6907 aa3.49□□□□□ -1.85
RBM39-208ENST00000416108 MT1XP80297 61 aa3.48□□□□□ -1.85
RBM39-208ENST00000416108 SSPOA2VEC9 5147 aa3.48□□□□□ -1.85
RBM39-208ENST00000416108 KRTAP9-6A0A140TA67 174 aa3.44□□□□□ -1.86
RBM39-208ENST00000416108 PRO0628Q9UI54 55 aa3.43□□□□□ -1.86
RBM39-208ENST00000416108 ROMO1P60602 79 aa3.42□□□□□ -1.86
RBM39-208ENST00000416108 C10orf95Q9H7T3 257 aa3.42□□□□□ -1.86
RBM39-208ENST00000416108 TNP1P09430 55 aa3.41□□□□□ -1.86
RBM39-208ENST00000416108 PMAIP1Q13794 54 aa3.4□□□□□ -1.87
RBM39-208ENST00000416108 KRTAP25-1Q3LHN0 102 aa3.37□□□□□ -1.87
RBM39-208ENST00000416108 KRTAP10-7P60409 375 aaPredicted RBP3.34□□□□□ -1.87
RBM39-208ENST00000416108 FCGBPQ9Y6R7 5405 aaPredicted RBP3.33□□□□□ -1.88
RBM39-208ENST00000416108 KRTAP10-12P60413 245 aa3.32□□□□□ -1.88
RBM39-208ENST00000416108 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.25□□□□□ -1.89
RBM39-208ENST00000416108 KRTAP8-1Q8IUC2 63 aa3.25□□□□□ -1.89
RBM39-208ENST00000416108 MACF1Q9UPN3 7388 aaKnown RBP3.25□□□□□ -1.89
RBM39-208ENST00000416108 LCE3AQ5TA76 89 aa3.24□□□□□ -1.89
RBM39-208ENST00000416108 KRTAP4-8A0A0G2JLE6 195 aa3.23□□□□□ -1.89
RBM39-208ENST00000416108 KRTAP23-1A1A580 65 aa3.23□□□□□ -1.89
RBM39-208ENST00000416108 PP632Q6XCG6 107 aa3.23□□□□□ -1.89
RBM39-208ENST00000416108 KRTAP4-8Q9BYQ9 185 aa3.23□□□□□ -1.89
RBM39-208ENST00000416108 KTN1-AS1Q86SY8 53 aa3.22□□□□□ -1.89
RBM39-208ENST00000416108 SYNE2Q8WXH0 6885 aaKnown RBP3.17□□□□□ -1.9
RBM39-208ENST00000416108 LOC100996750A0A140TA64 210 aa3.17□□□□□ -1.9
RBM39-208ENST00000416108 PRAC1Q96KF2 57 aa3.17□□□□□ -1.9
RBM39-208ENST00000416108 KRTAP4-6Q9BYQ5 205 aa3.17□□□□□ -1.9
RBM39-208ENST00000416108 KMT2DO14686 5537 aa3.16□□□□□ -1.9
RBM39-208ENST00000416108 KRTAP6-3Q3LI67 103 aa3.15□□□□□ -1.91
RBM39-208ENST00000416108 SPRR2FQ96RM1 72 aa3.15□□□□□ -1.91
RBM39-208ENST00000416108 KRTAP19-5Q3LI72 72 aa3.14□□□□□ -1.91
RBM39-208ENST00000416108 KRTAP9-7A8MTY7 169 aa3.13□□□□□ -1.91
RBM39-208ENST00000416108 KRTAP12-3P60328 96 aa3.13□□□□□ -1.91
RBM39-208ENST00000416108 KRTAP5-9P26371 169 aa3.11□□□□□ -1.91
RBM39-208ENST00000416108 KRTAP19-7Q3SYF9 63 aa3.1□□□□□ -1.91
RBM39-208ENST00000416108 SVIPQ8NHG7 77 aa3.09□□□□□ -1.91
RBM39-208ENST00000416108 MT1EP04732 61 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms