RNA–Protein interactions for RNA: ENST00000415409.5

HDAC8-211, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 913 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-211ENST00000415409 Q8N9P0 234 aaPredicted RBP3.7□□□□□ -1.82
HDAC8-211ENST00000415409 LINC00208Q96KT6 92 aa3.7□□□□□ -1.82
HDAC8-211ENST00000415409 Q1T7F1 81 aa3.69□□□□□ -1.82
HDAC8-211ENST00000415409 ATP11AUNQ6ZP68 121 aa3.69□□□□□ -1.82
HDAC8-211ENST00000415409 C1orf64Q8NEQ6 169 aa3.69□□□□□ -1.82
HDAC8-211ENST00000415409 FAT3Q8TDW7 4589 aa3.68□□□□□ -1.82
HDAC8-211ENST00000415409 A6NN06 94 aa3.68□□□□□ -1.82
HDAC8-211ENST00000415409 KRTAP16-1A8MUX0 517 aa3.68□□□□□ -1.82
HDAC8-211ENST00000415409 ZCCHC13Q8WW36 166 aaKnown RBP3.68□□□□□ -1.82
HDAC8-211ENST00000415409 RETNLBQ9BQ08 111 aa3.68□□□□□ -1.82
HDAC8-211ENST00000415409 MT1HL1P0DM35 61 aa3.67□□□□□ -1.82
HDAC8-211ENST00000415409 TNXBP22105 4242 aa3.67□□□□□ -1.82
HDAC8-211ENST00000415409 LOC101927531A0A1B0GV80 90 aa3.66□□□□□ -1.82
HDAC8-211ENST00000415409 C9orf92A6NGG3 77 aa3.66□□□□□ -1.82
HDAC8-211ENST00000415409 LRP1Q07954 4544 aaKnown RBP3.65□□□□□ -1.82
HDAC8-211ENST00000415409 IGLV7-46A0A075B6I9 117 aa3.64□□□□□ -1.83
HDAC8-211ENST00000415409 IGKV2-30P06310 120 aa3.64□□□□□ -1.83
HDAC8-211ENST00000415409 LCE1AQ5T7P2 110 aa3.64□□□□□ -1.83
HDAC8-211ENST00000415409 Q5W150 140 aa3.64□□□□□ -1.83
HDAC8-211ENST00000415409 HERC1Q15751 4861 aa3.63□□□□□ -1.83
HDAC8-211ENST00000415409 A8MUU9 505 aa3.63□□□□□ -1.83
HDAC8-211ENST00000415409 KRTAP13-3Q3SY46 172 aa3.63□□□□□ -1.83
HDAC8-211ENST00000415409 C20orf166-AS1Q96NR2 134 aa3.63□□□□□ -1.83
HDAC8-211ENST00000415409 MYCBP2O75592 4640 aa3.62□□□□□ -1.83
HDAC8-211ENST00000415409 PRR4Q16378 134 aa3.62□□□□□ -1.83
HDAC8-211ENST00000415409 MPLKIPQ8TAP9 179 aa3.62□□□□□ -1.83
HDAC8-211ENST00000415409 PCOTHQ58A44 107 aa3.61□□□□□ -1.83
HDAC8-211ENST00000415409 SPANXA2-OT1Q8N9U9 137 aa3.61□□□□□ -1.83
HDAC8-211ENST00000415409 CYP4F30PQ9H0H9 118 aa3.61□□□□□ -1.83
HDAC8-211ENST00000415409 IGKV2D-30A0A075B6S6 120 aa3.59□□□□□ -1.83
HDAC8-211ENST00000415409 RPL37P61927 97 aaKnown RBP3.56□□□□□ -1.84
HDAC8-211ENST00000415409 TPRXLQ17RH7 258 aa3.56□□□□□ -1.84
HDAC8-211ENST00000415409 HRES1P13985 223 aa3.55□□□□□ -1.84
HDAC8-211ENST00000415409 KRTAP10-7P60409 375 aaPredicted RBP3.54□□□□□ -1.84
HDAC8-211ENST00000415409 CDC42SE1Q9NRR8 79 aa3.54□□□□□ -1.84
HDAC8-211ENST00000415409 SPINK7P58062 85 aa3.52□□□□□ -1.85
HDAC8-211ENST00000415409 ACYP2P14621 99 aa3.51□□□□□ -1.85
HDAC8-211ENST00000415409 COA5Q86WW8 74 aa3.51□□□□□ -1.85
HDAC8-211ENST00000415409 Q5VV11 94 aa3.5□□□□□ -1.85
HDAC8-211ENST00000415409 SPTSSBQ8NFR3 76 aa3.5□□□□□ -1.85
HDAC8-211ENST00000415409 DMAC1Q96GE9 116 aa3.5□□□□□ -1.85
HDAC8-211ENST00000415409 KRTAP10-6P60371 365 aaPredicted RBP3.49□□□□□ -1.85
HDAC8-211ENST00000415409 CHKB-CPT1BH3BT56 60 aa3.48□□□□□ -1.85
HDAC8-211ENST00000415409 KRTAP2-2Q9BYT5 123 aa3.45□□□□□ -1.86
HDAC8-211ENST00000415409 HMCN2Q8NDA2 5059 aa3.44□□□□□ -1.86
HDAC8-211ENST00000415409 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.44□□□□□ -1.86
HDAC8-211ENST00000415409 COX6B2Q6YFQ2 88 aa3.44□□□□□ -1.86
HDAC8-211ENST00000415409 KRTAP5-11Q6L8G4 156 aa3.43□□□□□ -1.86
HDAC8-211ENST00000415409 A6NED7 52 aa3.42□□□□□ -1.86
HDAC8-211ENST00000415409 UBR4Q5T4S7 5183 aa3.42□□□□□ -1.86
HDAC8-211ENST00000415409 ROMO1P60602 79 aa3.41□□□□□ -1.86
HDAC8-211ENST00000415409 A8MU10 97 aa3.39□□□□□ -1.87
HDAC8-211ENST00000415409 K7ERS5 55 aa3.39□□□□□ -1.87
HDAC8-211ENST00000415409 LRP2P98164 4655 aa3.38□□□□□ -1.87
HDAC8-211ENST00000415409 LPAP08519 4548 aa3.37□□□□□ -1.87
HDAC8-211ENST00000415409 PRAC1Q96KF2 57 aa3.37□□□□□ -1.87
HDAC8-211ENST00000415409 PRR15LQ9BU68 103 aa3.37□□□□□ -1.87
HDAC8-211ENST00000415409 LINC01558Q9Y6Z2 57 aa3.37□□□□□ -1.87
HDAC8-211ENST00000415409 H1FX-AS1Q4G0G2 97 aa3.36□□□□□ -1.87
HDAC8-211ENST00000415409 LUZP6Q538Z0 58 aa3.36□□□□□ -1.87
HDAC8-211ENST00000415409 S4R3F8 94 aa3.35□□□□□ -1.87
HDAC8-211ENST00000415409 MUC17Q685J3 4493 aa3.34□□□□□ -1.87
HDAC8-211ENST00000415409 ADM2Q7Z4H4 148 aa3.33□□□□□ -1.88
HDAC8-211ENST00000415409 A0A1B0GU69 56 aa3.32□□□□□ -1.88
HDAC8-211ENST00000415409 LCE1EQ5T753 118 aa3.32□□□□□ -1.88
HDAC8-211ENST00000415409 KRTAP4-1Q9BYQ7 146 aa3.31□□□□□ -1.88
HDAC8-211ENST00000415409 RNF213Q63HN8 5207 aa3.31□□□□□ -1.88
HDAC8-211ENST00000415409 MIR22HGQ0VDD5 57 aa3.29□□□□□ -1.88
HDAC8-211ENST00000415409 CAMK2N1Q7Z7J9 78 aa3.29□□□□□ -1.88
HDAC8-211ENST00000415409 CSAG1Q6PB30 78 aa3.28□□□□□ -1.88
HDAC8-211ENST00000415409 UQCR11O14957 56 aa3.24□□□□□ -1.89
HDAC8-211ENST00000415409 P0C880 135 aa3.23□□□□□ -1.89
HDAC8-211ENST00000415409 MT3P25713 68 aa3.22□□□□□ -1.89
HDAC8-211ENST00000415409 A0A1B0GU33 70 aa3.21□□□□□ -1.9
HDAC8-211ENST00000415409 KRTAP19-2Q3LHN2 52 aa3.21□□□□□ -1.9
HDAC8-211ENST00000415409 KRTAP25-1Q3LHN0 102 aa3.2□□□□□ -1.9
HDAC8-211ENST00000415409 H0YAA0 97 aa3.19□□□□□ -1.9
HDAC8-211ENST00000415409 SPATA8Q6RVD6 105 aa3.18□□□□□ -1.9
HDAC8-211ENST00000415409 MUC2Q02817 5179 aa3.18□□□□□ -1.9
HDAC8-211ENST00000415409 FLGP20930 4061 aaPredicted RBP3.17□□□□□ -1.9
HDAC8-211ENST00000415409 NDUFAF8A1L188 74 aa3.14□□□□□ -1.91
HDAC8-211ENST00000415409 M0QZ58 72 aa3.12□□□□□ -1.91
HDAC8-211ENST00000415409 M0R2T5 61 aa3.12□□□□□ -1.91
HDAC8-211ENST00000415409 FAT4Q6V0I7 4981 aa3.11□□□□□ -1.91
HDAC8-211ENST00000415409 MT1HP80294 61 aa3.09□□□□□ -1.91
HDAC8-211ENST00000415409 R4GN34 69 aa3.09□□□□□ -1.91
HDAC8-211ENST00000415409 A0A0D9SG42 100 aa3.08□□□□□ -1.92
HDAC8-211ENST00000415409 KRTAP13-4Q3LI77 160 aa3.08□□□□□ -1.92
HDAC8-211ENST00000415409 CRIPTQ9P021 101 aa3.07□□□□□ -1.92
HDAC8-211ENST00000415409 CRCT1Q9UGL9 99 aa3.05□□□□□ -1.92
HDAC8-211ENST00000415409 KRTAP10-5P60370 271 aa3.02□□□□□ -1.93
HDAC8-211ENST00000415409 KRTAP5-1Q6L8H4 278 aa3.01□□□□□ -1.93
HDAC8-211ENST00000415409 SPINT4Q6UDR6 99 aa3.01□□□□□ -1.93
HDAC8-211ENST00000415409 KRTAP10-10P60014 251 aa3□□□□□ -1.93
HDAC8-211ENST00000415409 KRTAP12-1P59990 96 aa2.99□□□□□ -1.93
HDAC8-211ENST00000415409 MT2AP02795 61 aa2.98□□□□□ -1.93
HDAC8-211ENST00000415409 KRTAP12-2P59991 146 aa2.98□□□□□ -1.93
HDAC8-211ENST00000415409 MT1FP04733 61 aa2.96□□□□□ -1.94
HDAC8-211ENST00000415409 SPRR2GQ9BYE4 73 aa2.94□□□□□ -1.94
HDAC8-211ENST00000415409 PLAC4Q8WY50 150 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms