RNA–Protein interactions for RNA: ENST00000414241.7

RBBP4-204, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RBBP4, Length 1,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-204ENST00000414241 S4R3F8 94 aa7.38□□□□□ -1.23
RBBP4-204ENST00000414241 SEC61GP60059 68 aa7.35□□□□□ -1.23
RBBP4-204ENST00000414241 LCA10Q71F78 164 aa7.34□□□□□ -1.23
RBBP4-204ENST00000414241 HERC1Q15751 4861 aa7.34□□□□□ -1.23
RBBP4-204ENST00000414241 KRTAP4-1Q9BYQ7 146 aa7.33□□□□□ -1.24
RBBP4-204ENST00000414241 KRTAP3-3Q9BYR6 98 aa7.31□□□□□ -1.24
RBBP4-204ENST00000414241 HMCN2Q8NDA2 5059 aa7.29□□□□□ -1.24
RBBP4-204ENST00000414241 MUC17Q685J3 4493 aa7.28□□□□□ -1.24
RBBP4-204ENST00000414241 A6NED7 52 aa7.25□□□□□ -1.25
RBBP4-204ENST00000414241 CSAG1Q6PB30 78 aa7.23□□□□□ -1.25
RBBP4-204ENST00000414241 BRK1Q8WUW1 75 aa7.23□□□□□ -1.25
RBBP4-204ENST00000414241 UQCR11O14957 56 aa7.19□□□□□ -1.26
RBBP4-204ENST00000414241 KRTAP19-2Q3LHN2 52 aa7.18□□□□□ -1.26
RBBP4-204ENST00000414241 PRO0628Q9UI54 55 aa7.16□□□□□ -1.26
RBBP4-204ENST00000414241 CDC42SE1Q9NRR8 79 aa7.15□□□□□ -1.26
RBBP4-204ENST00000414241 A0A1B0GU33 70 aa7.13□□□□□ -1.27
RBBP4-204ENST00000414241 H0YAA0 97 aa7.1□□□□□ -1.27
RBBP4-204ENST00000414241 MIR22HGQ0VDD5 57 aa7.1□□□□□ -1.27
RBBP4-204ENST00000414241 SPATA8Q6RVD6 105 aa7.1□□□□□ -1.27
RBBP4-204ENST00000414241 KRTAP10-6P60371 365 aaPredicted RBP7.08□□□□□ -1.28
RBBP4-204ENST00000414241 KRTAP3-2Q9BYR7 98 aa7.08□□□□□ -1.28
RBBP4-204ENST00000414241 ADM2Q7Z4H4 148 aa7.05□□□□□ -1.28
RBBP4-204ENST00000414241 A8MU10 97 aa7.01□□□□□ -1.29
RBBP4-204ENST00000414241 P0C880 135 aa7□□□□□ -1.29
RBBP4-204ENST00000414241 MUC2Q02817 5179 aa6.98□□□□□ -1.29
RBBP4-204ENST00000414241 LCE2CQ5TA81 110 aa6.98□□□□□ -1.29
RBBP4-204ENST00000414241 UBR4Q5T4S7 5183 aa6.97□□□□□ -1.29
RBBP4-204ENST00000414241 M0QZ58 72 aa6.92□□□□□ -1.3
RBBP4-204ENST00000414241 RNF213Q63HN8 5207 aa6.9□□□□□ -1.31
RBBP4-204ENST00000414241 FLGP20930 4061 aaPredicted RBP6.88□□□□□ -1.31
RBBP4-204ENST00000414241 PMAIP1Q13794 54 aa6.87□□□□□ -1.31
RBBP4-204ENST00000414241 KRTAP13-4Q3LI77 160 aa6.87□□□□□ -1.31
RBBP4-204ENST00000414241 MT1HP80294 61 aa6.84□□□□□ -1.31
RBBP4-204ENST00000414241 K7ERS5 55 aa6.82□□□□□ -1.32
RBBP4-204ENST00000414241 M0R2T5 61 aa6.82□□□□□ -1.32
RBBP4-204ENST00000414241 R4GN34 69 aa6.82□□□□□ -1.32
RBBP4-204ENST00000414241 A6NN06 94 aa6.79□□□□□ -1.32
RBBP4-204ENST00000414241 CRIPTQ9P021 101 aa6.78□□□□□ -1.32
RBBP4-204ENST00000414241 A0A0D9SG42 100 aa6.77□□□□□ -1.33
RBBP4-204ENST00000414241 SVIPQ8NHG7 77 aa6.77□□□□□ -1.33
RBBP4-204ENST00000414241 LORP23490 312 aaPredicted RBP6.72□□□□□ -1.33
RBBP4-204ENST00000414241 FAT4Q6V0I7 4981 aa6.67□□□□□ -1.34
RBBP4-204ENST00000414241 KRTAP12-1P59990 96 aa6.66□□□□□ -1.34
RBBP4-204ENST00000414241 LINC01554Q52M75 96 aa6.65□□□□□ -1.34
RBBP4-204ENST00000414241 SPINT4Q6UDR6 99 aa6.64□□□□□ -1.35
RBBP4-204ENST00000414241 KRTAP12-2P59991 146 aa6.62□□□□□ -1.35
RBBP4-204ENST00000414241 LCE2DQ5TA82 110 aaPredicted RBP6.61□□□□□ -1.35
RBBP4-204ENST00000414241 KRTAP9-8Q9BYQ0 159 aa6.61□□□□□ -1.35
RBBP4-204ENST00000414241 KTN1-AS1Q86SY8 53 aa6.6□□□□□ -1.35
RBBP4-204ENST00000414241 MT2AP02795 61 aa6.59□□□□□ -1.35
RBBP4-204ENST00000414241 KRTAP10-10P60014 251 aa6.57□□□□□ -1.36
RBBP4-204ENST00000414241 SPRR2GQ9BYE4 73 aa6.56□□□□□ -1.36
RBBP4-204ENST00000414241 MT1FP04733 61 aa6.54□□□□□ -1.36
RBBP4-204ENST00000414241 ROMO1P60602 79 aa6.51□□□□□ -1.37
RBBP4-204ENST00000414241 LCE2AQ5TA79 106 aaPredicted RBP6.5□□□□□ -1.37
RBBP4-204ENST00000414241 KRTAP19-1Q8IUB9 90 aa6.49□□□□□ -1.37
RBBP4-204ENST00000414241 CAMK2N1Q7Z7J9 78 aa6.41□□□□□ -1.38
RBBP4-204ENST00000414241 PLAC4Q8WY50 150 aa6.39□□□□□ -1.39
RBBP4-204ENST00000414241 KRTAP9-3Q9BYQ3 159 aa6.37□□□□□ -1.39
RBBP4-204ENST00000414241 KRTAP19-8Q3LI54 63 aa6.36□□□□□ -1.39
RBBP4-204ENST00000414241 PRAC1Q96KF2 57 aa6.35□□□□□ -1.39
RBBP4-204ENST00000414241 C10orf95Q9H7T3 257 aa6.29□□□□□ -1.4
RBBP4-204ENST00000414241 KRTAP25-1Q3LHN0 102 aa6.25□□□□□ -1.41
RBBP4-204ENST00000414241 MT1BP07438 61 aa6.23□□□□□ -1.41
RBBP4-204ENST00000414241 LCE2BO14633 110 aa6.14□□□□□ -1.43
RBBP4-204ENST00000414241 TNP1P09430 55 aa6.13□□□□□ -1.43
RBBP4-204ENST00000414241 PRO2289Q9P1D8 64 aa6.07□□□□□ -1.44
RBBP4-204ENST00000414241 KRTAP10-5P60370 271 aa6.06□□□□□ -1.44
RBBP4-204ENST00000414241 MT1XP80297 61 aa6.05□□□□□ -1.44
RBBP4-204ENST00000414241 PP632Q6XCG6 107 aa6.04□□□□□ -1.44
RBBP4-204ENST00000414241 KRTAP23-1A1A580 65 aa6.02□□□□□ -1.45
RBBP4-204ENST00000414241 KRTAP9-2Q9BYQ4 174 aa5.94□□□□□ -1.46
RBBP4-204ENST00000414241 USH2AO75445 5202 aa5.88□□□□□ -1.47
RBBP4-204ENST00000414241 FSIP2Q5CZC0 6907 aa5.86□□□□□ -1.47
RBBP4-204ENST00000414241 KRTAP10-12P60413 245 aa5.8□□□□□ -1.48
RBBP4-204ENST00000414241 KRTAP10-7P60409 375 aaPredicted RBP5.8□□□□□ -1.48
RBBP4-204ENST00000414241 KRTAP19-6Q3LI70 58 aa5.8□□□□□ -1.48
RBBP4-204ENST00000414241 LCE3AQ5TA76 89 aa5.78□□□□□ -1.48
RBBP4-204ENST00000414241 KRTAP8-1Q8IUC2 63 aa5.72□□□□□ -1.49
RBBP4-204ENST00000414241 KRTAP9-6A0A140TA67 174 aa5.67□□□□□ -1.5
RBBP4-204ENST00000414241 SSPOA2VEC9 5147 aa5.66□□□□□ -1.5
RBBP4-204ENST00000414241 CRCT1Q9UGL9 99 aa5.64□□□□□ -1.51
RBBP4-204ENST00000414241 KRTAP12-3P60328 96 aa5.59□□□□□ -1.51
RBBP4-204ENST00000414241 KRTAP15-1Q3LI76 137 aa5.53□□□□□ -1.52
RBBP4-204ENST00000414241 KRTAP4-8A0A0G2JLE6 195 aa5.52□□□□□ -1.53
RBBP4-204ENST00000414241 KRTAP4-8Q9BYQ9 185 aa5.52□□□□□ -1.53
RBBP4-204ENST00000414241 KRTAP19-5Q3LI72 72 aa5.5□□□□□ -1.53
RBBP4-204ENST00000414241 FCGBPQ9Y6R7 5405 aaPredicted RBP5.43□□□□□ -1.54
RBBP4-204ENST00000414241 KRTAP19-7Q3SYF9 63 aa5.4□□□□□ -1.54
RBBP4-204ENST00000414241 KMT2DO14686 5537 aa5.35□□□□□ -1.55
RBBP4-204ENST00000414241 SPRR5A0A1B0GTR4 108 aa5.34□□□□□ -1.55
RBBP4-204ENST00000414241 KRTAP19-4Q3LI73 84 aa5.34□□□□□ -1.56
RBBP4-204ENST00000414241 MT1EP04732 61 aa5.31□□□□□ -1.56
RBBP4-204ENST00000414241 MACF1Q9UPN3 7388 aaKnown RBP5.27□□□□□ -1.57
RBBP4-204ENST00000414241 LUZP6Q538Z0 58 aa5.26□□□□□ -1.57
RBBP4-204ENST00000414241 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.25□□□□□ -1.57
RBBP4-204ENST00000414241 LCE3CQ5T5A8 94 aa5.23□□□□□ -1.57
RBBP4-204ENST00000414241 SYNE2Q8WXH0 6885 aaKnown RBP5.22□□□□□ -1.57
RBBP4-204ENST00000414241 MT1LQ93083 61 aa5.21□□□□□ -1.57
RBBP4-204ENST00000414241 NDUFAF8A1L188 74 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms