RNA–Protein interactions for RNA: ENST00000413137.6

RHBDD3-203, Transcript of rhomboid domain containing 3, humanhuman

TSL 5

Gene RHBDD3, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-203ENST00000413137 LCA10Q71F78 164 aa12.59□□□□□ -0.39
RHBDD3-203ENST00000413137 KRTAP3-3Q9BYR6 98 aa12.54□□□□□ -0.4
RHBDD3-203ENST00000413137 ACYP2P14621 99 aa12.52□□□□□ -0.4
RHBDD3-203ENST00000413137 KRTAP10-6P60371 365 aaPredicted RBP12.43□□□□□ -0.42
RHBDD3-203ENST00000413137 LORP23490 312 aaPredicted RBP12.38□□□□□ -0.43
RHBDD3-203ENST00000413137 CSAG1Q6PB30 78 aa12.37□□□□□ -0.43
RHBDD3-203ENST00000413137 TMEM258P61165 79 aa12.36□□□□□ -0.43
RHBDD3-203ENST00000413137 COA5Q86WW8 74 aa12.34□□□□□ -0.43
RHBDD3-203ENST00000413137 CHKB-CPT1BH3BT56 60 aa12.3□□□□□ -0.44
RHBDD3-203ENST00000413137 ATP5EP56381 51 aaPredicted RBP12.29□□□□□ -0.44
RHBDD3-203ENST00000413137 KRTAP9-8Q9BYQ0 159 aa12.29□□□□□ -0.44
RHBDD3-203ENST00000413137 MT2AP02795 61 aa12.19□□□□□ -0.46
RHBDD3-203ENST00000413137 MT1FP04733 61 aa12.13□□□□□ -0.47
RHBDD3-203ENST00000413137 SPTSSBQ8NFR3 76 aa12.11□□□□□ -0.47
RHBDD3-203ENST00000413137 KRTAP10-10P60014 251 aa12.04□□□□□ -0.48
RHBDD3-203ENST00000413137 H0YAA0 97 aa12.01□□□□□ -0.49
RHBDD3-203ENST00000413137 ADM2Q7Z4H4 148 aa12.01□□□□□ -0.49
RHBDD3-203ENST00000413137 SERP1Q9Y6X1 66 aa11.99□□□□□ -0.49
RHBDD3-203ENST00000413137 KRTAP3-2Q9BYR7 98 aa11.96□□□□□ -0.5
RHBDD3-203ENST00000413137 P0C880 135 aa11.91□□□□□ -0.5
RHBDD3-203ENST00000413137 KRTAP9-3Q9BYQ3 159 aa11.86□□□□□ -0.51
RHBDD3-203ENST00000413137 LCE2DQ5TA82 110 aaPredicted RBP11.72□□□□□ -0.53
RHBDD3-203ENST00000413137 RPS28P62857 69 aaKnown RBP11.71□□□□□ -0.54
RHBDD3-203ENST00000413137 KRTAP19-1Q8IUB9 90 aa11.71□□□□□ -0.54
RHBDD3-203ENST00000413137 SEC61GP60059 68 aa11.67□□□□□ -0.54
RHBDD3-203ENST00000413137 LINC01558Q9Y6Z2 57 aa11.67□□□□□ -0.54
RHBDD3-203ENST00000413137 KRTAP9-2Q9BYQ4 174 aa11.66□□□□□ -0.54
RHBDD3-203ENST00000413137 CRIPTQ9P021 101 aa11.66□□□□□ -0.54
RHBDD3-203ENST00000413137 LCE2BO14633 110 aa11.65□□□□□ -0.54
RHBDD3-203ENST00000413137 A0A1B0GU69 56 aa11.64□□□□□ -0.55
RHBDD3-203ENST00000413137 SPRR2GQ9BYE4 73 aa11.63□□□□□ -0.55
RHBDD3-203ENST00000413137 SMIM26A0A096LP01 95 aa11.58□□□□□ -0.55
RHBDD3-203ENST00000413137 R4GN34 69 aa11.58□□□□□ -0.56
RHBDD3-203ENST00000413137 M0QZ58 72 aa11.55□□□□□ -0.56
RHBDD3-203ENST00000413137 USH2AO75445 5202 aa11.55□□□□□ -0.56
RHBDD3-203ENST00000413137 Q1T7F1 81 aa11.51□□□□□ -0.57
RHBDD3-203ENST00000413137 KRTAP13-4Q3LI77 160 aa11.51□□□□□ -0.57
RHBDD3-203ENST00000413137 A0A1B0GU33 70 aa11.48□□□□□ -0.57
RHBDD3-203ENST00000413137 PRR15LQ9BU68 103 aa11.47□□□□□ -0.57
RHBDD3-203ENST00000413137 FSIP2Q5CZC0 6907 aa11.44□□□□□ -0.58
RHBDD3-203ENST00000413137 V9GYY9 64 aa11.43□□□□□ -0.58
RHBDD3-203ENST00000413137 KRTAP19-8Q3LI54 63 aa11.41□□□□□ -0.58
RHBDD3-203ENST00000413137 PSPHP1O15172 72 aa11.4□□□□□ -0.58
RHBDD3-203ENST00000413137 SPATA8Q6RVD6 105 aa11.39□□□□□ -0.59
RHBDD3-203ENST00000413137 LINC01554Q52M75 96 aa11.38□□□□□ -0.59
RHBDD3-203ENST00000413137 MT1BP07438 61 aa11.36□□□□□ -0.59
RHBDD3-203ENST00000413137 Q5VV11 94 aa11.31□□□□□ -0.6
RHBDD3-203ENST00000413137 SSPOA2VEC9 5147 aa11.26□□□□□ -0.61
RHBDD3-203ENST00000413137 A0A0D9SG42 100 aa11.21□□□□□ -0.61
RHBDD3-203ENST00000413137 A8MU10 97 aa11.16□□□□□ -0.62
RHBDD3-203ENST00000413137 UQCR11O14957 56 aa11.16□□□□□ -0.62
RHBDD3-203ENST00000413137 CRCT1Q9UGL9 99 aa11.14□□□□□ -0.63
RHBDD3-203ENST00000413137 PLAC4Q8WY50 150 aa11.08□□□□□ -0.64
RHBDD3-203ENST00000413137 A6NN06 94 aa11.07□□□□□ -0.64
RHBDD3-203ENST00000413137 MIR22HGQ0VDD5 57 aa11.03□□□□□ -0.64
RHBDD3-203ENST00000413137 A6NED7 52 aa11□□□□□ -0.65
RHBDD3-203ENST00000413137 KRTAP19-6Q3LI70 58 aa11□□□□□ -0.65
RHBDD3-203ENST00000413137 KRTAP12-1P59990 96 aa10.99□□□□□ -0.65
RHBDD3-203ENST00000413137 KRTAP9-6A0A140TA67 174 aa10.99□□□□□ -0.65
RHBDD3-203ENST00000413137 KRTAP12-2P59991 146 aa10.96□□□□□ -0.65
RHBDD3-203ENST00000413137 SPINT4Q6UDR6 99 aa10.95□□□□□ -0.66
RHBDD3-203ENST00000413137 FCGBPQ9Y6R7 5405 aaPredicted RBP10.87□□□□□ -0.67
RHBDD3-203ENST00000413137 MT1XP80297 61 aa10.86□□□□□ -0.67
RHBDD3-203ENST00000413137 KRTAP10-5P60370 271 aa10.85□□□□□ -0.67
RHBDD3-203ENST00000413137 CAMK2N1Q7Z7J9 78 aa10.77□□□□□ -0.68
RHBDD3-203ENST00000413137 CDC42SE1Q9NRR8 79 aa10.7□□□□□ -0.7
RHBDD3-203ENST00000413137 PRO2289Q9P1D8 64 aa10.69□□□□□ -0.7
RHBDD3-203ENST00000413137 SVIPQ8NHG7 77 aa10.61□□□□□ -0.71
RHBDD3-203ENST00000413137 K7ERS5 55 aa10.54□□□□□ -0.72
RHBDD3-203ENST00000413137 BRK1Q8WUW1 75 aa10.48□□□□□ -0.73
RHBDD3-203ENST00000413137 C10orf95Q9H7T3 257 aa10.46□□□□□ -0.74
RHBDD3-203ENST00000413137 MACF1Q9UPN3 7388 aaKnown RBP10.44□□□□□ -0.74
RHBDD3-203ENST00000413137 KRTAP10-7P60409 375 aaPredicted RBP10.42□□□□□ -0.74
RHBDD3-203ENST00000413137 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.33□□□□□ -0.76
RHBDD3-203ENST00000413137 KMT2DO14686 5537 aa10.3□□□□□ -0.76
RHBDD3-203ENST00000413137 KRTAP10-12P60413 245 aa10.28□□□□□ -0.76
RHBDD3-203ENST00000413137 SYNE2Q8WXH0 6885 aaKnown RBP10.22□□□□□ -0.77
RHBDD3-203ENST00000413137 KRTAP4-8A0A0G2JLE6 195 aa10.18□□□□□ -0.78
RHBDD3-203ENST00000413137 KRTAP4-8Q9BYQ9 185 aa10.18□□□□□ -0.78
RHBDD3-203ENST00000413137 TNP1P09430 55 aa10.14□□□□□ -0.79
RHBDD3-203ENST00000413137 ROMO1P60602 79 aa10.09□□□□□ -0.79
RHBDD3-203ENST00000413137 KRTAP25-1Q3LHN0 102 aa9.99□□□□□ -0.81
RHBDD3-203ENST00000413137 KRTAP9-7A8MTY7 169 aa9.97□□□□□ -0.81
RHBDD3-203ENST00000413137 KRTAP8-1Q8IUC2 63 aa9.96□□□□□ -0.82
RHBDD3-203ENST00000413137 PRO0628Q9UI54 55 aa9.93□□□□□ -0.82
RHBDD3-203ENST00000413137 LCE3AQ5TA76 89 aa9.91□□□□□ -0.82
RHBDD3-203ENST00000413137 PMAIP1Q13794 54 aa9.88□□□□□ -0.83
RHBDD3-203ENST00000413137 KRTAP6-3Q3LI67 103 aa9.88□□□□□ -0.83
RHBDD3-203ENST00000413137 KRTAP5-9P26371 169 aa9.78□□□□□ -0.84
RHBDD3-203ENST00000413137 SPRR2FQ96RM1 72 aa9.73□□□□□ -0.85
RHBDD3-203ENST00000413137 KRTAP19-7Q3SYF9 63 aa9.71□□□□□ -0.86
RHBDD3-203ENST00000413137 KRTAP19-5Q3LI72 72 aa9.7□□□□□ -0.86
RHBDD3-203ENST00000413137 MUC12Q9UKN1 5478 aa9.69□□□□□ -0.86
RHBDD3-203ENST00000413137 KRTAP23-1A1A580 65 aa9.63□□□□□ -0.87
RHBDD3-203ENST00000413137 MDN1Q9NU22 5596 aa9.58□□□□□ -0.88
RHBDD3-203ENST00000413137 MT1EP04732 61 aa9.55□□□□□ -0.88
RHBDD3-203ENST00000413137 KRTAP12-3P60328 96 aa9.49□□□□□ -0.89
RHBDD3-203ENST00000413137 PP632Q6XCG6 107 aa9.48□□□□□ -0.89
RHBDD3-203ENST00000413137 NEBP20929 6669 aa9.42□□□□□ -0.9
RHBDD3-203ENST00000413137 PRAC1Q96KF2 57 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 150.6 ms