RNA–Protein interactions for RNA: ENST00000412036.6

CXXC1-202, Transcript of CXXC finger protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXXC1, Length 2,280 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-202ENST00000412036 KRTAP4-1Q9BYQ7 146 aa9.35□□□□□ -0.91
CXXC1-202ENST00000412036 CHKB-CPT1BH3BT56 60 aa9.33□□□□□ -0.92
CXXC1-202ENST00000412036 RNF213Q63HN8 5207 aa9.31□□□□□ -0.92
CXXC1-202ENST00000412036 KRTAP3-1Q9BYR8 98 aa9.3□□□□□ -0.92
CXXC1-202ENST00000412036 LINC01558Q9Y6Z2 57 aa9.28□□□□□ -0.92
CXXC1-202ENST00000412036 LCA10Q71F78 164 aa9.23□□□□□ -0.93
CXXC1-202ENST00000412036 DMAC1Q96GE9 116 aa9.22□□□□□ -0.93
CXXC1-202ENST00000412036 ACYP2P14621 99 aa9.21□□□□□ -0.94
CXXC1-202ENST00000412036 A6NED7 52 aa9.2□□□□□ -0.94
CXXC1-202ENST00000412036 SEC61BP60468 96 aaKnown RBP9.19□□□□□ -0.94
CXXC1-202ENST00000412036 COX6B2Q6YFQ2 88 aa9.12□□□□□ -0.95
CXXC1-202ENST00000412036 FAT4Q6V0I7 4981 aa9.11□□□□□ -0.95
CXXC1-202ENST00000412036 CDC42SE1Q9NRR8 79 aa9.09□□□□□ -0.95
CXXC1-202ENST00000412036 SPTSSBQ8NFR3 76 aa9.08□□□□□ -0.96
CXXC1-202ENST00000412036 H3BS24 57 aa9.07□□□□□ -0.96
CXXC1-202ENST00000412036 KRTAP19-2Q3LHN2 52 aa9.07□□□□□ -0.96
CXXC1-202ENST00000412036 RBM12B-AS1Q9P1G2 102 aa9.02□□□□□ -0.97
CXXC1-202ENST00000412036 FLGP20930 4061 aaPredicted RBP8.98□□□□□ -0.97
CXXC1-202ENST00000412036 A6NN06 94 aa8.96□□□□□ -0.98
CXXC1-202ENST00000412036 KRTAP3-3Q9BYR6 98 aa8.96□□□□□ -0.98
CXXC1-202ENST00000412036 A0A1B0GU69 56 aa8.94□□□□□ -0.98
CXXC1-202ENST00000412036 KTN1-AS1Q86SY8 53 aa8.94□□□□□ -0.98
CXXC1-202ENST00000412036 H1FX-AS1Q4G0G2 97 aa8.9□□□□□ -0.98
CXXC1-202ENST00000412036 LCE2CQ5TA81 110 aa8.85□□□□□ -0.99
CXXC1-202ENST00000412036 S4R3F8 94 aa8.84□□□□□ -0.99
CXXC1-202ENST00000412036 SPATA8Q6RVD6 105 aa8.81□□□□□ -1
CXXC1-202ENST00000412036 UQCR11O14957 56 aa8.77□□□□□ -1.01
CXXC1-202ENST00000412036 MIR22HGQ0VDD5 57 aa8.75□□□□□ -1.01
CXXC1-202ENST00000412036 KRTAP3-2Q9BYR7 98 aa8.62□□□□□ -1.03
CXXC1-202ENST00000412036 MT1HP80294 61 aa8.61□□□□□ -1.03
CXXC1-202ENST00000412036 ADM2Q7Z4H4 148 aa8.6□□□□□ -1.03
CXXC1-202ENST00000412036 CSAG1Q6PB30 78 aa8.59□□□□□ -1.03
CXXC1-202ENST00000412036 KRTAP10-6P60371 365 aaPredicted RBP8.59□□□□□ -1.03
CXXC1-202ENST00000412036 PRAC1Q96KF2 57 aa8.57□□□□□ -1.04
CXXC1-202ENST00000412036 H0YAA0 97 aa8.56□□□□□ -1.04
CXXC1-202ENST00000412036 P0C880 135 aa8.55□□□□□ -1.04
CXXC1-202ENST00000412036 A0A1B0GU33 70 aa8.5□□□□□ -1.05
CXXC1-202ENST00000412036 LORP23490 312 aaPredicted RBP8.45□□□□□ -1.06
CXXC1-202ENST00000412036 LINC01554Q52M75 96 aa8.42□□□□□ -1.06
CXXC1-202ENST00000412036 KRTAP13-4Q3LI77 160 aa8.42□□□□□ -1.06
CXXC1-202ENST00000412036 M0R2T5 61 aa8.39□□□□□ -1.07
CXXC1-202ENST00000412036 KRTAP9-8Q9BYQ0 159 aa8.32□□□□□ -1.08
CXXC1-202ENST00000412036 LCE2AQ5TA79 106 aaPredicted RBP8.31□□□□□ -1.08
CXXC1-202ENST00000412036 A0A0A0MQY5 61 aa8.29□□□□□ -1.08
CXXC1-202ENST00000412036 MT2AP02795 61 aa8.27□□□□□ -1.09
CXXC1-202ENST00000412036 MT1FP04733 61 aa8.26□□□□□ -1.09
CXXC1-202ENST00000412036 A0A0D9SG42 100 aa8.15□□□□□ -1.1
CXXC1-202ENST00000412036 M0QZ58 72 aa8.15□□□□□ -1.1
CXXC1-202ENST00000412036 R4GN34 69 aa8.12□□□□□ -1.11
CXXC1-202ENST00000412036 KRTAP10-10P60014 251 aa8.11□□□□□ -1.11
CXXC1-202ENST00000412036 K7ERS5 55 aa8.1□□□□□ -1.11
CXXC1-202ENST00000412036 KRTAP19-1Q8IUB9 90 aa8.09□□□□□ -1.11
CXXC1-202ENST00000412036 KRTAP25-1Q3LHN0 102 aa8.07□□□□□ -1.12
CXXC1-202ENST00000412036 CRIPTQ9P021 101 aa8.06□□□□□ -1.12
CXXC1-202ENST00000412036 KRTAP12-2P59991 146 aa8.01□□□□□ -1.13
CXXC1-202ENST00000412036 KRTAP9-3Q9BYQ3 159 aa8□□□□□ -1.13
CXXC1-202ENST00000412036 SPRR2GQ9BYE4 73 aa8□□□□□ -1.13
CXXC1-202ENST00000412036 ROMO1P60602 79 aa7.99□□□□□ -1.13
CXXC1-202ENST00000412036 KRTAP12-1P59990 96 aa7.99□□□□□ -1.13
CXXC1-202ENST00000412036 USH2AO75445 5202 aa7.95□□□□□ -1.14
CXXC1-202ENST00000412036 SPINT4Q6UDR6 99 aa7.9□□□□□ -1.14
CXXC1-202ENST00000412036 LCE2BO14633 110 aa7.85□□□□□ -1.15
CXXC1-202ENST00000412036 MT1BP07438 61 aa7.8□□□□□ -1.16
CXXC1-202ENST00000412036 KRTAP19-8Q3LI54 63 aa7.79□□□□□ -1.16
CXXC1-202ENST00000412036 C10orf95Q9H7T3 257 aa7.78□□□□□ -1.16
CXXC1-202ENST00000412036 FSIP2Q5CZC0 6907 aa7.73□□□□□ -1.17
CXXC1-202ENST00000412036 SSPOA2VEC9 5147 aa7.67□□□□□ -1.18
CXXC1-202ENST00000412036 PLAC4Q8WY50 150 aa7.59□□□□□ -1.19
CXXC1-202ENST00000412036 CAMK2N1Q7Z7J9 78 aa7.58□□□□□ -1.2
CXXC1-202ENST00000412036 MT1XP80297 61 aa7.53□□□□□ -1.2
CXXC1-202ENST00000412036 KRTAP10-5P60370 271 aa7.52□□□□□ -1.21
CXXC1-202ENST00000412036 KRTAP9-2Q9BYQ4 174 aa7.48□□□□□ -1.21
CXXC1-202ENST00000412036 LCE2DQ5TA82 110 aaPredicted RBP7.43□□□□□ -1.22
CXXC1-202ENST00000412036 KRTAP15-1Q3LI76 137 aa7.38□□□□□ -1.23
CXXC1-202ENST00000412036 KMT2DO14686 5537 aa7.35□□□□□ -1.23
CXXC1-202ENST00000412036 LUZP6Q538Z0 58 aa7.33□□□□□ -1.24
CXXC1-202ENST00000412036 NDUFAF8A1L188 74 aa7.32□□□□□ -1.24
CXXC1-202ENST00000412036 FCGBPQ9Y6R7 5405 aaPredicted RBP7.28□□□□□ -1.24
CXXC1-202ENST00000412036 KRTAP10-7P60409 375 aaPredicted RBP7.27□□□□□ -1.25
CXXC1-202ENST00000412036 KRTAP19-6Q3LI70 58 aa7.24□□□□□ -1.25
CXXC1-202ENST00000412036 TNP1P09430 55 aa7.18□□□□□ -1.26
CXXC1-202ENST00000412036 PRO2289Q9P1D8 64 aa7.18□□□□□ -1.26
CXXC1-202ENST00000412036 KRTAP9-6A0A140TA67 174 aa7.1□□□□□ -1.27
CXXC1-202ENST00000412036 CRCT1Q9UGL9 99 aa7.09□□□□□ -1.27
CXXC1-202ENST00000412036 KRTAP10-12P60413 245 aa7.07□□□□□ -1.28
CXXC1-202ENST00000412036 LCE3AQ5TA76 89 aa7.07□□□□□ -1.28
CXXC1-202ENST00000412036 KRTAP4-8A0A0G2JLE6 195 aa7.05□□□□□ -1.28
CXXC1-202ENST00000412036 KRTAP4-8Q9BYQ9 185 aa7.05□□□□□ -1.28
CXXC1-202ENST00000412036 PP632Q6XCG6 107 aa7.04□□□□□ -1.28
CXXC1-202ENST00000412036 MACF1Q9UPN3 7388 aaKnown RBP6.96□□□□□ -1.3
CXXC1-202ENST00000412036 KRTAP23-1A1A580 65 aa6.88□□□□□ -1.31
CXXC1-202ENST00000412036 SYNE2Q8WXH0 6885 aaKnown RBP6.83□□□□□ -1.32
CXXC1-202ENST00000412036 KRTAP8-1Q8IUC2 63 aa6.83□□□□□ -1.32
CXXC1-202ENST00000412036 KRTAP19-5Q3LI72 72 aa6.78□□□□□ -1.32
CXXC1-202ENST00000412036 MUC12Q9UKN1 5478 aa6.77□□□□□ -1.33
CXXC1-202ENST00000412036 KRTAP19-7Q3SYF9 63 aa6.74□□□□□ -1.33
CXXC1-202ENST00000412036 KRTAP12-3P60328 96 aa6.71□□□□□ -1.34
CXXC1-202ENST00000412036 SPRR5A0A1B0GTR4 108 aa6.62□□□□□ -1.35
CXXC1-202ENST00000412036 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.59□□□□□ -1.35
CXXC1-202ENST00000412036 MT1EP04732 61 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms