RNA–Protein interactions for RNA: ENST00000411769.1

CRKL-202, Transcript of CRK like proto-oncogene, adaptor protein, humanhuman

TSL 1 (best)

Gene CRKL, Length 2,037 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRKL-202ENST00000411769 A8MUU9 505 aa10.3□□□□□ -0.76
CRKL-202ENST00000411769 C7orf65Q6ZTY9 151 aa10.29□□□□□ -0.76
CRKL-202ENST00000411769 A0A1B0GU69 56 aa10.28□□□□□ -0.76
CRKL-202ENST00000411769 KTN1-AS1Q86SY8 53 aa10.25□□□□□ -0.77
CRKL-202ENST00000411769 XP32Q5T750 250 aa10.24□□□□□ -0.77
CRKL-202ENST00000411769 LRP2P98164 4655 aa10.2□□□□□ -0.78
CRKL-202ENST00000411769 TPRXLQ17RH7 258 aa10.2□□□□□ -0.78
CRKL-202ENST00000411769 SPATA8Q6RVD6 105 aa10.17□□□□□ -0.78
CRKL-202ENST00000411769 SEC61GP60059 68 aa10.16□□□□□ -0.78
CRKL-202ENST00000411769 RPL37P61927 97 aaKnown RBP10.15□□□□□ -0.78
CRKL-202ENST00000411769 UQCR11O14957 56 aa10.09□□□□□ -0.79
CRKL-202ENST00000411769 MIR22HGQ0VDD5 57 aa10.08□□□□□ -0.8
CRKL-202ENST00000411769 UBR4Q5T4S7 5183 aa10.07□□□□□ -0.8
CRKL-202ENST00000411769 KRTAP3-1Q9BYR8 98 aa10.06□□□□□ -0.8
CRKL-202ENST00000411769 RBM12B-AS1Q9P1G2 102 aa9.99□□□□□ -0.81
CRKL-202ENST00000411769 RNF213Q63HN8 5207 aa9.89□□□□□ -0.83
CRKL-202ENST00000411769 ADM2Q7Z4H4 148 aa9.85□□□□□ -0.83
CRKL-202ENST00000411769 COX6B2Q6YFQ2 88 aa9.84□□□□□ -0.83
CRKL-202ENST00000411769 MUC2Q02817 5179 aa9.84□□□□□ -0.83
CRKL-202ENST00000411769 SEC61BP60468 96 aaKnown RBP9.83□□□□□ -0.84
CRKL-202ENST00000411769 PRAC1Q96KF2 57 aa9.83□□□□□ -0.84
CRKL-202ENST00000411769 MUC17Q685J3 4493 aa9.83□□□□□ -0.84
CRKL-202ENST00000411769 H0YAA0 97 aa9.8□□□□□ -0.84
CRKL-202ENST00000411769 A0A1B0GU33 70 aa9.76□□□□□ -0.85
CRKL-202ENST00000411769 H1FX-AS1Q4G0G2 97 aa9.74□□□□□ -0.85
CRKL-202ENST00000411769 KRTAP4-1Q9BYQ7 146 aa9.73□□□□□ -0.85
CRKL-202ENST00000411769 KRTAP3-3Q9BYR6 98 aa9.63□□□□□ -0.87
CRKL-202ENST00000411769 CSAG1Q6PB30 78 aa9.56□□□□□ -0.88
CRKL-202ENST00000411769 KRTAP10-6P60371 365 aaPredicted RBP9.54□□□□□ -0.88
CRKL-202ENST00000411769 KRTAP3-2Q9BYR7 98 aa9.49□□□□□ -0.89
CRKL-202ENST00000411769 LINC01554Q52M75 96 aa9.48□□□□□ -0.89
CRKL-202ENST00000411769 S4R3F8 94 aa9.46□□□□□ -0.89
CRKL-202ENST00000411769 KRTAP19-2Q3LHN2 52 aa9.43□□□□□ -0.9
CRKL-202ENST00000411769 KRTAP13-4Q3LI77 160 aa9.41□□□□□ -0.9
CRKL-202ENST00000411769 FAT4Q6V0I7 4981 aa9.38□□□□□ -0.91
CRKL-202ENST00000411769 K7ERS5 55 aa9.36□□□□□ -0.91
CRKL-202ENST00000411769 FLGP20930 4061 aaPredicted RBP9.33□□□□□ -0.92
CRKL-202ENST00000411769 KRTAP25-1Q3LHN0 102 aa9.32□□□□□ -0.92
CRKL-202ENST00000411769 P0C880 135 aa9.32□□□□□ -0.92
CRKL-202ENST00000411769 A0A0D9SG42 100 aa9.26□□□□□ -0.93
CRKL-202ENST00000411769 LCE2CQ5TA81 110 aa9.23□□□□□ -0.93
CRKL-202ENST00000411769 ROMO1P60602 79 aa9.21□□□□□ -0.93
CRKL-202ENST00000411769 CRIPTQ9P021 101 aa9.17□□□□□ -0.94
CRKL-202ENST00000411769 LCE2AQ5TA79 106 aaPredicted RBP9.1□□□□□ -0.95
CRKL-202ENST00000411769 KRTAP12-2P59991 146 aa9.09□□□□□ -0.95
CRKL-202ENST00000411769 MT1HP80294 61 aa9.05□□□□□ -0.96
CRKL-202ENST00000411769 KRTAP12-1P59990 96 aa9.04□□□□□ -0.96
CRKL-202ENST00000411769 M0QZ58 72 aa9□□□□□ -0.97
CRKL-202ENST00000411769 M0R2T5 61 aa8.96□□□□□ -0.98
CRKL-202ENST00000411769 SPINT4Q6UDR6 99 aa8.95□□□□□ -0.98
CRKL-202ENST00000411769 C10orf95Q9H7T3 257 aa8.88□□□□□ -0.99
CRKL-202ENST00000411769 LORP23490 312 aaPredicted RBP8.81□□□□□ -1
CRKL-202ENST00000411769 R4GN34 69 aa8.75□□□□□ -1.01
CRKL-202ENST00000411769 KRTAP9-8Q9BYQ0 159 aa8.7□□□□□ -1.02
CRKL-202ENST00000411769 MT2AP02795 61 aa8.68□□□□□ -1.02
CRKL-202ENST00000411769 MT1FP04733 61 aa8.64□□□□□ -1.03
CRKL-202ENST00000411769 KRTAP10-10P60014 251 aa8.6□□□□□ -1.03
CRKL-202ENST00000411769 KRTAP15-1Q3LI76 137 aa8.53□□□□□ -1.04
CRKL-202ENST00000411769 H3BS24 57 aa8.52□□□□□ -1.05
CRKL-202ENST00000411769 KRTAP19-1Q8IUB9 90 aa8.47□□□□□ -1.05
CRKL-202ENST00000411769 SPRR2GQ9BYE4 73 aa8.44□□□□□ -1.06
CRKL-202ENST00000411769 KRTAP9-2Q9BYQ4 174 aa8.42□□□□□ -1.06
CRKL-202ENST00000411769 LCE2DQ5TA82 110 aaPredicted RBP8.41□□□□□ -1.06
CRKL-202ENST00000411769 FSIP2Q5CZC0 6907 aa8.39□□□□□ -1.07
CRKL-202ENST00000411769 KRTAP9-3Q9BYQ3 159 aa8.38□□□□□ -1.07
CRKL-202ENST00000411769 CAMK2N1Q7Z7J9 78 aa8.29□□□□□ -1.08
CRKL-202ENST00000411769 USH2AO75445 5202 aa8.28□□□□□ -1.08
CRKL-202ENST00000411769 LCE2BO14633 110 aa8.25□□□□□ -1.09
CRKL-202ENST00000411769 KRTAP19-8Q3LI54 63 aa8.22□□□□□ -1.09
CRKL-202ENST00000411769 NDUFAF8A1L188 74 aa8.21□□□□□ -1.1
CRKL-202ENST00000411769 MT1BP07438 61 aa8.17□□□□□ -1.1
CRKL-202ENST00000411769 PP632Q6XCG6 107 aa8.16□□□□□ -1.1
CRKL-202ENST00000411769 PLAC4Q8WY50 150 aa8.15□□□□□ -1.1
CRKL-202ENST00000411769 SSPOA2VEC9 5147 aa8.11□□□□□ -1.11
CRKL-202ENST00000411769 CRCT1Q9UGL9 99 aa8.02□□□□□ -1.13
CRKL-202ENST00000411769 TNP1P09430 55 aa8.01□□□□□ -1.13
CRKL-202ENST00000411769 KRTAP23-1A1A580 65 aa7.96□□□□□ -1.13
CRKL-202ENST00000411769 KRTAP9-6A0A140TA67 174 aa7.95□□□□□ -1.14
CRKL-202ENST00000411769 MT1XP80297 61 aa7.9□□□□□ -1.15
CRKL-202ENST00000411769 KRTAP10-5P60370 271 aa7.88□□□□□ -1.15
CRKL-202ENST00000411769 FCGBPQ9Y6R7 5405 aaPredicted RBP7.87□□□□□ -1.15
CRKL-202ENST00000411769 KRTAP19-6Q3LI70 58 aa7.81□□□□□ -1.16
CRKL-202ENST00000411769 PRO2289Q9P1D8 64 aa7.74□□□□□ -1.17
CRKL-202ENST00000411769 LOC100996750A0A140TA64 210 aa7.71□□□□□ -1.17
CRKL-202ENST00000411769 KRTAP4-6Q9BYQ5 205 aa7.71□□□□□ -1.17
CRKL-202ENST00000411769 LUZP6Q538Z0 58 aa7.68□□□□□ -1.18
CRKL-202ENST00000411769 SPRR5A0A1B0GTR4 108 aa7.67□□□□□ -1.18
CRKL-202ENST00000411769 LCE3AQ5TA76 89 aa7.62□□□□□ -1.19
CRKL-202ENST00000411769 KRTAP10-7P60409 375 aaPredicted RBP7.61□□□□□ -1.19
CRKL-202ENST00000411769 MACF1Q9UPN3 7388 aaKnown RBP7.54□□□□□ -1.2
CRKL-202ENST00000411769 KRTAP8-1Q8IUC2 63 aa7.47□□□□□ -1.21
CRKL-202ENST00000411769 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.46□□□□□ -1.22
CRKL-202ENST00000411769 KRTAP10-12P60413 245 aa7.46□□□□□ -1.22
CRKL-202ENST00000411769 KMT2DO14686 5537 aa7.46□□□□□ -1.22
CRKL-202ENST00000411769 SYNE2Q8WXH0 6885 aaKnown RBP7.44□□□□□ -1.22
CRKL-202ENST00000411769 KRTAP4-8A0A0G2JLE6 195 aa7.34□□□□□ -1.23
CRKL-202ENST00000411769 KRTAP4-8Q9BYQ9 185 aa7.34□□□□□ -1.23
CRKL-202ENST00000411769 KRTAP12-3P60328 96 aa7.26□□□□□ -1.25
CRKL-202ENST00000411769 A0A0A0MQY5 61 aa7.25□□□□□ -1.25
CRKL-202ENST00000411769 KRTAP9-7A8MTY7 169 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms