RNA–Protein interactions for RNA: ENST00000410062.8

UBE2E3-202, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2E3, Length 1,570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-202ENST00000410062 FAM236AA0A1B0GUQ0 79 aa11.25□□□□□ -0.61
UBE2E3-202ENST00000410062 FAM236BA0A1B0GV22 79 aa11.25□□□□□ -0.61
UBE2E3-202ENST00000410062 KRTAP9-3Q9BYQ3 159 aa11.25□□□□□ -0.61
UBE2E3-202ENST00000410062 CRCT1Q9UGL9 99 aa11.24□□□□□ -0.61
UBE2E3-202ENST00000410062 H3BPC8 53 aa11.2□□□□□ -0.62
UBE2E3-202ENST00000410062 CSAG1Q6PB30 78 aa11.18□□□□□ -0.62
UBE2E3-202ENST00000410062 KRTAP3-3Q9BYR6 98 aa11.15□□□□□ -0.62
UBE2E3-202ENST00000410062 LCE2BO14633 110 aa11.13□□□□□ -0.63
UBE2E3-202ENST00000410062 USH2AO75445 5202 aa11.12□□□□□ -0.63
UBE2E3-202ENST00000410062 TRAV7A0A075B6U4 112 aa11.1□□□□□ -0.63
UBE2E3-202ENST00000410062 SERP2Q8N6R1 65 aa11.1□□□□□ -0.63
UBE2E3-202ENST00000410062 A8MUN3 132 aa11.08□□□□□ -0.64
UBE2E3-202ENST00000410062 PRO0628Q9UI54 55 aa11.07□□□□□ -0.64
UBE2E3-202ENST00000410062 NDUFC1O43677 76 aa10.99□□□□□ -0.65
UBE2E3-202ENST00000410062 SSPOA2VEC9 5147 aa10.96□□□□□ -0.65
UBE2E3-202ENST00000410062 SERP1Q9Y6X1 66 aa10.94□□□□□ -0.66
UBE2E3-202ENST00000410062 DMAC1Q96GE9 116 aa10.93□□□□□ -0.66
UBE2E3-202ENST00000410062 SNURFQ9Y675 71 aa10.88□□□□□ -0.67
UBE2E3-202ENST00000410062 ATP5EP56381 51 aaPredicted RBP10.86□□□□□ -0.67
UBE2E3-202ENST00000410062 SMIM26A0A096LP01 95 aa10.86□□□□□ -0.67
UBE2E3-202ENST00000410062 KRTAP19-1Q8IUB9 90 aa10.83□□□□□ -0.68
UBE2E3-202ENST00000410062 C20orf197Q8N268 126 aa10.81□□□□□ -0.68
UBE2E3-202ENST00000410062 V9GYY9 64 aa10.81□□□□□ -0.68
UBE2E3-202ENST00000410062 H0YAA0 97 aa10.76□□□□□ -0.69
UBE2E3-202ENST00000410062 SEC61GP60059 68 aa10.76□□□□□ -0.69
UBE2E3-202ENST00000410062 SPRR2GQ9BYE4 73 aa10.73□□□□□ -0.69
UBE2E3-202ENST00000410062 CYSTM1Q9H1C7 97 aa10.73□□□□□ -0.69
UBE2E3-202ENST00000410062 ACYP2P14621 99 aa10.73□□□□□ -0.69
UBE2E3-202ENST00000410062 ADM2Q7Z4H4 148 aa10.71□□□□□ -0.69
UBE2E3-202ENST00000410062 CRIPTQ9P021 101 aa10.66□□□□□ -0.7
UBE2E3-202ENST00000410062 H7BZZ5 65 aa10.65□□□□□ -0.71
UBE2E3-202ENST00000410062 KRTAP19-6Q3LI70 58 aa10.65□□□□□ -0.71
UBE2E3-202ENST00000410062 FCGBPQ9Y6R7 5405 aaPredicted RBP10.63□□□□□ -0.71
UBE2E3-202ENST00000410062 SPANXA2-OT1Q8N9U9 137 aa10.63□□□□□ -0.71
UBE2E3-202ENST00000410062 KRTAP19-8Q3LI54 63 aa10.6□□□□□ -0.71
UBE2E3-202ENST00000410062 MT1BP07438 61 aa10.58□□□□□ -0.72
UBE2E3-202ENST00000410062 Q5VV11 94 aa10.58□□□□□ -0.72
UBE2E3-202ENST00000410062 CHKB-CPT1BH3BT56 60 aa10.55□□□□□ -0.72
UBE2E3-202ENST00000410062 P0C880 135 aa10.53□□□□□ -0.72
UBE2E3-202ENST00000410062 BRK1Q8WUW1 75 aa10.52□□□□□ -0.72
UBE2E3-202ENST00000410062 SPTSSBQ8NFR3 76 aa10.51□□□□□ -0.73
UBE2E3-202ENST00000410062 KRTAP3-2Q9BYR7 98 aa10.48□□□□□ -0.73
UBE2E3-202ENST00000410062 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.45□□□□□ -0.74
UBE2E3-202ENST00000410062 PMAIP1Q13794 54 aa10.43□□□□□ -0.74
UBE2E3-202ENST00000410062 R4GN34 69 aa10.39□□□□□ -0.75
UBE2E3-202ENST00000410062 M0QZ58 72 aa10.34□□□□□ -0.75
UBE2E3-202ENST00000410062 COA5Q86WW8 74 aa10.34□□□□□ -0.75
UBE2E3-202ENST00000410062 MACF1Q9UPN3 7388 aaKnown RBP10.31□□□□□ -0.76
UBE2E3-202ENST00000410062 A6NN06 94 aa10.31□□□□□ -0.76
UBE2E3-202ENST00000410062 Q1T7F1 81 aa10.31□□□□□ -0.76
UBE2E3-202ENST00000410062 KRTAP10-5P60370 271 aa10.25□□□□□ -0.77
UBE2E3-202ENST00000410062 KRTAP9-7A8MTY7 169 aa10.2□□□□□ -0.78
UBE2E3-202ENST00000410062 LINC01554Q52M75 96 aa10.2□□□□□ -0.78
UBE2E3-202ENST00000410062 PLAC4Q8WY50 150 aa10.16□□□□□ -0.78
UBE2E3-202ENST00000410062 SYNE2Q8WXH0 6885 aaKnown RBP10.12□□□□□ -0.79
UBE2E3-202ENST00000410062 KTN1-AS1Q86SY8 53 aa10.05□□□□□ -0.8
UBE2E3-202ENST00000410062 MT1XP80297 61 aa10.01□□□□□ -0.81
UBE2E3-202ENST00000410062 KRTAP13-4Q3LI77 160 aa9.99□□□□□ -0.81
UBE2E3-202ENST00000410062 PRO2289Q9P1D8 64 aa9.98□□□□□ -0.81
UBE2E3-202ENST00000410062 PSPHP1O15172 72 aa9.89□□□□□ -0.83
UBE2E3-202ENST00000410062 KRTAP6-3Q3LI67 103 aa9.87□□□□□ -0.83
UBE2E3-202ENST00000410062 A0A1B0GU33 70 aa9.81□□□□□ -0.84
UBE2E3-202ENST00000410062 A0A1B0GU69 56 aa9.8□□□□□ -0.84
UBE2E3-202ENST00000410062 SPATA8Q6RVD6 105 aa9.78□□□□□ -0.84
UBE2E3-202ENST00000410062 CDC42SE1Q9NRR8 79 aa9.75□□□□□ -0.85
UBE2E3-202ENST00000410062 A0A0D9SG42 100 aa9.73□□□□□ -0.85
UBE2E3-202ENST00000410062 PRR15LQ9BU68 103 aa9.71□□□□□ -0.86
UBE2E3-202ENST00000410062 A6NED7 52 aa9.7□□□□□ -0.86
UBE2E3-202ENST00000410062 KMT2DO14686 5537 aa9.67□□□□□ -0.86
UBE2E3-202ENST00000410062 KRTAP12-2P59991 146 aa9.66□□□□□ -0.86
UBE2E3-202ENST00000410062 CAMK2N1Q7Z7J9 78 aa9.62□□□□□ -0.87
UBE2E3-202ENST00000410062 LINC01558Q9Y6Z2 57 aa9.59□□□□□ -0.87
UBE2E3-202ENST00000410062 KRTAP10-7P60409 375 aaPredicted RBP9.58□□□□□ -0.88
UBE2E3-202ENST00000410062 KRTAP5-9P26371 169 aa9.57□□□□□ -0.88
UBE2E3-202ENST00000410062 SPINT4Q6UDR6 99 aa9.56□□□□□ -0.88
UBE2E3-202ENST00000410062 MUC12Q9UKN1 5478 aa9.53□□□□□ -0.88
UBE2E3-202ENST00000410062 KRTAP12-1P59990 96 aa9.52□□□□□ -0.89
UBE2E3-202ENST00000410062 A8MU10 97 aa9.5□□□□□ -0.89
UBE2E3-202ENST00000410062 KRTAP10-12P60413 245 aa9.5□□□□□ -0.89
UBE2E3-202ENST00000410062 KRTAP4-8A0A0G2JLE6 195 aa9.49□□□□□ -0.89
UBE2E3-202ENST00000410062 KRTAP8-1Q8IUC2 63 aa9.49□□□□□ -0.89
UBE2E3-202ENST00000410062 KRTAP4-8Q9BYQ9 185 aa9.49□□□□□ -0.89
UBE2E3-202ENST00000410062 SPRR2FQ96RM1 72 aa9.41□□□□□ -0.9
UBE2E3-202ENST00000410062 NEBP20929 6669 aa9.41□□□□□ -0.9
UBE2E3-202ENST00000410062 H3BS24 57 aa9.32□□□□□ -0.92
UBE2E3-202ENST00000410062 MDN1Q9NU22 5596 aa9.31□□□□□ -0.92
UBE2E3-202ENST00000410062 UQCR11O14957 56 aa9.29□□□□□ -0.92
UBE2E3-202ENST00000410062 SPRR2EP22531 72 aa9.18□□□□□ -0.94
UBE2E3-202ENST00000410062 SPRR2BP35325 72 aa9.18□□□□□ -0.94
UBE2E3-202ENST00000410062 SPRR2AP35326 72 aa9.18□□□□□ -0.94
UBE2E3-202ENST00000410062 MIR22HGQ0VDD5 57 aa9.12□□□□□ -0.95
UBE2E3-202ENST00000410062 LCE1AQ5T7P2 110 aa9.11□□□□□ -0.95
UBE2E3-202ENST00000410062 C10orf95Q9H7T3 257 aa9.08□□□□□ -0.96
UBE2E3-202ENST00000410062 PRAC1Q96KF2 57 aa9.07□□□□□ -0.96
UBE2E3-202ENST00000410062 KRTAP20-1Q3LI63 56 aa8.98□□□□□ -0.97
UBE2E3-202ENST00000410062 TNP1P09430 55 aa8.95□□□□□ -0.98
UBE2E3-202ENST00000410062 KRTAP19-7Q3SYF9 63 aa8.95□□□□□ -0.98
UBE2E3-202ENST00000410062 SPRR2DP22532 72 aa8.86□□□□□ -0.99
UBE2E3-202ENST00000410062 K7ERS5 55 aa8.86□□□□□ -0.99
UBE2E3-202ENST00000410062 MT1EP04732 61 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms