RNA–Protein interactions for RNA: ENST00000409796.5

LYSMD4-204, Transcript of LysM domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD4, Length 2,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-204ENST00000409796 ROMO1P60602 79 aa8.06□□□□□ -1.12
LYSMD4-204ENST00000409796 FLG2Q5D862 2391 aaPredicted RBP8.03□□□□□ -1.12
LYSMD4-204ENST00000409796 A0A1B0GU33 70 aa8.01□□□□□ -1.13
LYSMD4-204ENST00000409796 H1FX-AS1Q4G0G2 97 aa7.99□□□□□ -1.13
LYSMD4-204ENST00000409796 COX6B2Q6YFQ2 88 aa7.99□□□□□ -1.13
LYSMD4-204ENST00000409796 ABCA13Q86UQ4 5058 aa7.94□□□□□ -1.14
LYSMD4-204ENST00000409796 CRIPTQ9P021 101 aa7.94□□□□□ -1.14
LYSMD4-204ENST00000409796 FAT3Q8TDW7 4589 aa7.93□□□□□ -1.14
LYSMD4-204ENST00000409796 P0C880 135 aa7.88□□□□□ -1.15
LYSMD4-204ENST00000409796 LRP1Q07954 4544 aaKnown RBP7.88□□□□□ -1.15
LYSMD4-204ENST00000409796 TNXBP22105 4242 aa7.88□□□□□ -1.15
LYSMD4-204ENST00000409796 KRTAP4-5Q9BYR2 181 aa7.87□□□□□ -1.15
LYSMD4-204ENST00000409796 HSPG2P98160 4391 aa7.87□□□□□ -1.15
LYSMD4-204ENST00000409796 KRTAP10-8P60410 259 aa7.85□□□□□ -1.15
LYSMD4-204ENST00000409796 RPL37P61927 97 aaKnown RBP7.81□□□□□ -1.16
LYSMD4-204ENST00000409796 KRTAP3-3Q9BYR6 98 aa7.81□□□□□ -1.16
LYSMD4-204ENST00000409796 DMBT1Q9UGM3 2413 aaPredicted RBP7.78□□□□□ -1.16
LYSMD4-204ENST00000409796 XP32Q5T750 250 aa7.77□□□□□ -1.17
LYSMD4-204ENST00000409796 Q5VSD8 79 aa7.77□□□□□ -1.17
LYSMD4-204ENST00000409796 KRTAP10-6P60371 365 aaPredicted RBP7.76□□□□□ -1.17
LYSMD4-204ENST00000409796 K7ERS5 55 aa7.75□□□□□ -1.17
LYSMD4-204ENST00000409796 KRTAP13-4Q3LI77 160 aa7.71□□□□□ -1.18
LYSMD4-204ENST00000409796 KRTAP3-2Q9BYR7 98 aa7.71□□□□□ -1.18
LYSMD4-204ENST00000409796 S4R3F8 94 aa7.71□□□□□ -1.18
LYSMD4-204ENST00000409796 MYCBP2O75592 4640 aa7.71□□□□□ -1.18
LYSMD4-204ENST00000409796 HERC1Q15751 4861 aa7.7□□□□□ -1.18
LYSMD4-204ENST00000409796 TPRXLQ17RH7 258 aa7.66□□□□□ -1.18
LYSMD4-204ENST00000409796 A0A0D9SG42 100 aa7.65□□□□□ -1.19
LYSMD4-204ENST00000409796 SPINT4Q6UDR6 99 aa7.62□□□□□ -1.19
LYSMD4-204ENST00000409796 MT1HL1P0DM35 61 aa7.59□□□□□ -1.19
LYSMD4-204ENST00000409796 C10orf95Q9H7T3 257 aa7.57□□□□□ -1.2
LYSMD4-204ENST00000409796 KRTAP15-1Q3LI76 137 aa7.53□□□□□ -1.2
LYSMD4-204ENST00000409796 NDUFAF8A1L188 74 aa7.52□□□□□ -1.21
LYSMD4-204ENST00000409796 LPAP08519 4548 aa7.49□□□□□ -1.21
LYSMD4-204ENST00000409796 LRP2P98164 4655 aa7.46□□□□□ -1.22
LYSMD4-204ENST00000409796 KRTAP12-2P59991 146 aa7.45□□□□□ -1.22
LYSMD4-204ENST00000409796 J3QL48 77 aa7.44□□□□□ -1.22
LYSMD4-204ENST00000409796 KRTAP12-1P59990 96 aa7.39□□□□□ -1.23
LYSMD4-204ENST00000409796 M0QZ58 72 aa7.32□□□□□ -1.24
LYSMD4-204ENST00000409796 HMCN2Q8NDA2 5059 aa7.3□□□□□ -1.24
LYSMD4-204ENST00000409796 UBR4Q5T4S7 5183 aa7.27□□□□□ -1.25
LYSMD4-204ENST00000409796 MUC17Q685J3 4493 aa7.15□□□□□ -1.26
LYSMD4-204ENST00000409796 R4GN34 69 aa7.14□□□□□ -1.27
LYSMD4-204ENST00000409796 SEC61BP60468 96 aaKnown RBP7.13□□□□□ -1.27
LYSMD4-204ENST00000409796 KRTAP4-1Q9BYQ7 146 aa7.11□□□□□ -1.27
LYSMD4-204ENST00000409796 LORP23490 312 aaPredicted RBP7.1□□□□□ -1.27
LYSMD4-204ENST00000409796 A0A0A0MQY5 61 aa7.02□□□□□ -1.29
LYSMD4-204ENST00000409796 RNF213Q63HN8 5207 aa7.01□□□□□ -1.29
LYSMD4-204ENST00000409796 KRTAP19-2Q3LHN2 52 aa6.98□□□□□ -1.29
LYSMD4-204ENST00000409796 PLAC4Q8WY50 150 aa6.95□□□□□ -1.3
LYSMD4-204ENST00000409796 LUZP6Q538Z0 58 aa6.91□□□□□ -1.3
LYSMD4-204ENST00000409796 MUC2Q02817 5179 aa6.8□□□□□ -1.32
LYSMD4-204ENST00000409796 CAMK2N1Q7Z7J9 78 aa6.79□□□□□ -1.32
LYSMD4-204ENST00000409796 FLGP20930 4061 aaPredicted RBP6.78□□□□□ -1.32
LYSMD4-204ENST00000409796 PP632Q6XCG6 107 aa6.68□□□□□ -1.34
LYSMD4-204ENST00000409796 KRTAP9-2Q9BYQ4 174 aa6.63□□□□□ -1.35
LYSMD4-204ENST00000409796 TNP1P09430 55 aa6.54□□□□□ -1.36
LYSMD4-204ENST00000409796 LCE2AQ5TA79 106 aaPredicted RBP6.54□□□□□ -1.36
LYSMD4-204ENST00000409796 FAT4Q6V0I7 4981 aa6.54□□□□□ -1.36
LYSMD4-204ENST00000409796 LCE2CQ5TA81 110 aa6.53□□□□□ -1.36
LYSMD4-204ENST00000409796 KRTAP9-6A0A140TA67 174 aa6.5□□□□□ -1.37
LYSMD4-204ENST00000409796 KRTAP23-1A1A580 65 aa6.45□□□□□ -1.38
LYSMD4-204ENST00000409796 SPRR2GQ9BYE4 73 aa6.43□□□□□ -1.38
LYSMD4-204ENST00000409796 KRTAP19-1Q8IUB9 90 aa6.42□□□□□ -1.38
LYSMD4-204ENST00000409796 SPRR5A0A1B0GTR4 108 aa6.42□□□□□ -1.38
LYSMD4-204ENST00000409796 M0R2T5 61 aa6.36□□□□□ -1.39
LYSMD4-204ENST00000409796 MT1HP80294 61 aa6.33□□□□□ -1.4
LYSMD4-204ENST00000409796 LCE2DQ5TA82 110 aaPredicted RBP6.28□□□□□ -1.4
LYSMD4-204ENST00000409796 MT1FP04733 61 aa6.27□□□□□ -1.41
LYSMD4-204ENST00000409796 MT2AP02795 61 aa6.26□□□□□ -1.41
LYSMD4-204ENST00000409796 KRTAP10-10P60014 251 aa6.25□□□□□ -1.41
LYSMD4-204ENST00000409796 CRCT1Q9UGL9 99 aa6.22□□□□□ -1.41
LYSMD4-204ENST00000409796 FSIP2Q5CZC0 6907 aa6.22□□□□□ -1.41
LYSMD4-204ENST00000409796 LCE3AQ5TA76 89 aa6.22□□□□□ -1.41
LYSMD4-204ENST00000409796 KRTAP9-8Q9BYQ0 159 aa6.21□□□□□ -1.42
LYSMD4-204ENST00000409796 KRTAP19-8Q3LI54 63 aa6.14□□□□□ -1.43
LYSMD4-204ENST00000409796 PRO2289Q9P1D8 64 aa6.11□□□□□ -1.43
LYSMD4-204ENST00000409796 MT1BP07438 61 aa6.08□□□□□ -1.44
LYSMD4-204ENST00000409796 KRTAP10-5P60370 271 aa6.06□□□□□ -1.44
LYSMD4-204ENST00000409796 MT1XP80297 61 aa6.05□□□□□ -1.44
LYSMD4-204ENST00000409796 KRTAP8-1Q8IUC2 63 aa6.04□□□□□ -1.44
LYSMD4-204ENST00000409796 INE1O15225 51 aa5.94□□□□□ -1.46
LYSMD4-204ENST00000409796 KRTAP10-12P60413 245 aa5.94□□□□□ -1.46
LYSMD4-204ENST00000409796 KRTAP9-3Q9BYQ3 159 aa5.94□□□□□ -1.46
LYSMD4-204ENST00000409796 KRTAP12-3P60328 96 aa5.91□□□□□ -1.46
LYSMD4-204ENST00000409796 KRTAP10-7P60409 375 aaPredicted RBP5.9□□□□□ -1.47
LYSMD4-204ENST00000409796 KRTAP9-7A8MTY7 169 aa5.81□□□□□ -1.48
LYSMD4-204ENST00000409796 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.8□□□□□ -1.48
LYSMD4-204ENST00000409796 USH2AO75445 5202 aa5.74□□□□□ -1.49
LYSMD4-204ENST00000409796 SSPOA2VEC9 5147 aa5.73□□□□□ -1.49
LYSMD4-204ENST00000409796 LCE2BO14633 110 aa5.71□□□□□ -1.5
LYSMD4-204ENST00000409796 KRTAP19-5Q3LI72 72 aa5.66□□□□□ -1.5
LYSMD4-204ENST00000409796 FCGBPQ9Y6R7 5405 aaPredicted RBP5.63□□□□□ -1.51
LYSMD4-204ENST00000409796 LCE3CQ5T5A8 94 aa5.56□□□□□ -1.52
LYSMD4-204ENST00000409796 KMT2DO14686 5537 aa5.55□□□□□ -1.52
LYSMD4-204ENST00000409796 KRTAP4-8A0A0G2JLE6 195 aa5.53□□□□□ -1.52
LYSMD4-204ENST00000409796 KRTAP4-8Q9BYQ9 185 aa5.53□□□□□ -1.52
LYSMD4-204ENST00000409796 MACF1Q9UPN3 7388 aaKnown RBP5.52□□□□□ -1.53
LYSMD4-204ENST00000409796 SYNE2Q8WXH0 6885 aaKnown RBP5.51□□□□□ -1.53
LYSMD4-204ENST00000409796 KRTAP19-6Q3LI70 58 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 115.4 ms