RNA–Protein interactions for RNA: ENST00000409127.1

CCDC115-202, Transcript of coiled-coil domain containing 115, humanhuman

TSL 2 BASIC

Gene CCDC115, Length 1,247 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC115-202ENST00000409127 SMIM20Q8N5G0 67 aa10.18□□□□□ -0.78
CCDC115-202ENST00000409127 NDUFC1O43677 76 aa10.15□□□□□ -0.78
CCDC115-202ENST00000409127 KRTAP3-3Q9BYR6 98 aa10.13□□□□□ -0.79
CCDC115-202ENST00000409127 USH2AO75445 5202 aa10.13□□□□□ -0.79
CCDC115-202ENST00000409127 TRAV7A0A075B6U4 112 aa10.08□□□□□ -0.8
CCDC115-202ENST00000409127 KRTAP19-1Q8IUB9 90 aa9.97□□□□□ -0.81
CCDC115-202ENST00000409127 DMAC1Q96GE9 116 aa9.97□□□□□ -0.81
CCDC115-202ENST00000409127 SSPOA2VEC9 5147 aa9.96□□□□□ -0.82
CCDC115-202ENST00000409127 H0YAA0 97 aa9.94□□□□□ -0.82
CCDC115-202ENST00000409127 CRIPTQ9P021 101 aa9.94□□□□□ -0.82
CCDC115-202ENST00000409127 SPRR2GQ9BYE4 73 aa9.89□□□□□ -0.83
CCDC115-202ENST00000409127 KRTAP19-6Q3LI70 58 aa9.88□□□□□ -0.83
CCDC115-202ENST00000409127 ACYP2P14621 99 aa9.86□□□□□ -0.83
CCDC115-202ENST00000409127 SERP2Q8N6R1 65 aa9.84□□□□□ -0.83
CCDC115-202ENST00000409127 Q5VV11 94 aa9.83□□□□□ -0.84
CCDC115-202ENST00000409127 ADM2Q7Z4H4 148 aa9.83□□□□□ -0.84
CCDC115-202ENST00000409127 SNURFQ9Y675 71 aa9.81□□□□□ -0.84
CCDC115-202ENST00000409127 C20orf197Q8N268 126 aa9.77□□□□□ -0.85
CCDC115-202ENST00000409127 KRTAP19-8Q3LI54 63 aa9.76□□□□□ -0.85
CCDC115-202ENST00000409127 SPTSSBQ8NFR3 76 aa9.76□□□□□ -0.85
CCDC115-202ENST00000409127 FCGBPQ9Y6R7 5405 aaPredicted RBP9.74□□□□□ -0.85
CCDC115-202ENST00000409127 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.74□□□□□ -0.85
CCDC115-202ENST00000409127 CHKB-CPT1BH3BT56 60 aa9.71□□□□□ -0.86
CCDC115-202ENST00000409127 SPANXA2-OT1Q8N9U9 137 aa9.7□□□□□ -0.86
CCDC115-202ENST00000409127 MT1BP07438 61 aa9.68□□□□□ -0.86
CCDC115-202ENST00000409127 R4GN34 69 aa9.61□□□□□ -0.87
CCDC115-202ENST00000409127 A6NN06 94 aa9.6□□□□□ -0.87
CCDC115-202ENST00000409127 COX7CP15954 63 aa9.59□□□□□ -0.87
CCDC115-202ENST00000409127 P0C880 135 aa9.57□□□□□ -0.88
CCDC115-202ENST00000409127 KRTAP9-7A8MTY7 169 aa9.56□□□□□ -0.88
CCDC115-202ENST00000409127 M0QZ58 72 aa9.51□□□□□ -0.89
CCDC115-202ENST00000409127 KRTAP3-2Q9BYR7 98 aa9.51□□□□□ -0.89
CCDC115-202ENST00000409127 KRTAP10-5P60370 271 aa9.46□□□□□ -0.9
CCDC115-202ENST00000409127 PLAC4Q8WY50 150 aa9.46□□□□□ -0.9
CCDC115-202ENST00000409127 MACF1Q9UPN3 7388 aaKnown RBP9.43□□□□□ -0.9
CCDC115-202ENST00000409127 ANAPC13Q9BS18 74 aa9.41□□□□□ -0.9
CCDC115-202ENST00000409127 COA5Q86WW8 74 aa9.38□□□□□ -0.91
CCDC115-202ENST00000409127 LINC01554Q52M75 96 aa9.37□□□□□ -0.91
CCDC115-202ENST00000409127 H7BZZ5 65 aa9.35□□□□□ -0.91
CCDC115-202ENST00000409127 PRO2289Q9P1D8 64 aa9.35□□□□□ -0.91
CCDC115-202ENST00000409127 SYNE2Q8WXH0 6885 aaKnown RBP9.3□□□□□ -0.92
CCDC115-202ENST00000409127 SEC61GP60059 68 aa9.27□□□□□ -0.93
CCDC115-202ENST00000409127 CYSTM1Q9H1C7 97 aa9.25□□□□□ -0.93
CCDC115-202ENST00000409127 KRTAP6-3Q3LI67 103 aa9.24□□□□□ -0.93
CCDC115-202ENST00000409127 SERP1Q9Y6X1 66 aa9.22□□□□□ -0.93
CCDC115-202ENST00000409127 MT1XP80297 61 aa9.15□□□□□ -0.94
CCDC115-202ENST00000409127 CCDC179H3BU77 68 aa9.13□□□□□ -0.95
CCDC115-202ENST00000409127 ATP5EP56381 51 aaPredicted RBP9.08□□□□□ -0.96
CCDC115-202ENST00000409127 KRTAP13-4Q3LI77 160 aa9□□□□□ -0.97
CCDC115-202ENST00000409127 A0A1B0GU33 70 aa8.99□□□□□ -0.97
CCDC115-202ENST00000409127 A0A1B0GU69 56 aa8.96□□□□□ -0.98
CCDC115-202ENST00000409127 KRTAP12-2P59991 146 aa8.95□□□□□ -0.98
CCDC115-202ENST00000409127 CAMK2N1Q7Z7J9 78 aa8.91□□□□□ -0.98
CCDC115-202ENST00000409127 TMEM258P61165 79 aa8.89□□□□□ -0.99
CCDC115-202ENST00000409127 KRTAP5-9P26371 169 aa8.88□□□□□ -0.99
CCDC115-202ENST00000409127 A0A0D9SG42 100 aa8.87□□□□□ -0.99
CCDC115-202ENST00000409127 SPATA8Q6RVD6 105 aa8.86□□□□□ -0.99
CCDC115-202ENST00000409127 PRR15LQ9BU68 103 aa8.84□□□□□ -0.99
CCDC115-202ENST00000409127 KRTAP8-1Q8IUC2 63 aa8.81□□□□□ -1
CCDC115-202ENST00000409127 SMIM26A0A096LP01 95 aa8.78□□□□□ -1
CCDC115-202ENST00000409127 SPINT4Q6UDR6 99 aa8.76□□□□□ -1.01
CCDC115-202ENST00000409127 KRTAP10-7P60409 375 aaPredicted RBP8.73□□□□□ -1.01
CCDC115-202ENST00000409127 KRTAP10-12P60413 245 aa8.73□□□□□ -1.01
CCDC115-202ENST00000409127 SPRR2FQ96RM1 72 aa8.73□□□□□ -1.01
CCDC115-202ENST00000409127 LINC01558Q9Y6Z2 57 aa8.7□□□□□ -1.02
CCDC115-202ENST00000409127 KMT2DO14686 5537 aa8.7□□□□□ -1.02
CCDC115-202ENST00000409127 NEBP20929 6669 aa8.69□□□□□ -1.02
CCDC115-202ENST00000409127 MUC12Q9UKN1 5478 aa8.69□□□□□ -1.02
CCDC115-202ENST00000409127 KRTAP4-8A0A0G2JLE6 195 aa8.65□□□□□ -1.02
CCDC115-202ENST00000409127 KRTAP4-8Q9BYQ9 185 aa8.65□□□□□ -1.02
CCDC115-202ENST00000409127 KRTAP12-1P59990 96 aa8.64□□□□□ -1.03
CCDC115-202ENST00000409127 A8MU10 97 aa8.56□□□□□ -1.04
CCDC115-202ENST00000409127 SPRR2EP22531 72 aa8.54□□□□□ -1.04
CCDC115-202ENST00000409127 SPRR2BP35325 72 aa8.54□□□□□ -1.04
CCDC115-202ENST00000409127 SPRR2AP35326 72 aa8.54□□□□□ -1.04
CCDC115-202ENST00000409127 MDN1Q9NU22 5596 aa8.53□□□□□ -1.04
CCDC115-202ENST00000409127 UQCR11O14957 56 aa8.5□□□□□ -1.05
CCDC115-202ENST00000409127 V9GYY9 64 aa8.45□□□□□ -1.06
CCDC115-202ENST00000409127 KRTAP20-1Q3LI63 56 aa8.44□□□□□ -1.06
CCDC115-202ENST00000409127 LCE1AQ5T7P2 110 aa8.41□□□□□ -1.06
CCDC115-202ENST00000409127 KRTAP2-3P0C7H8 128 aa8.31□□□□□ -1.08
CCDC115-202ENST00000409127 MIR22HGQ0VDD5 57 aa8.31□□□□□ -1.08
CCDC115-202ENST00000409127 Q1T7F1 81 aa8.31□□□□□ -1.08
CCDC115-202ENST00000409127 KRTAP2-4Q9BYR9 128 aa8.31□□□□□ -1.08
CCDC115-202ENST00000409127 TNP1P09430 55 aa8.27□□□□□ -1.09
CCDC115-202ENST00000409127 PSPHP1O15172 72 aa8.26□□□□□ -1.09
CCDC115-202ENST00000409127 SPRR2DP22532 72 aa8.26□□□□□ -1.09
CCDC115-202ENST00000409127 PCP4P48539 62 aa8.23□□□□□ -1.09
CCDC115-202ENST00000409127 C10orf95Q9H7T3 257 aa8.23□□□□□ -1.09
CCDC115-202ENST00000409127 K7ERS5 55 aa8.22□□□□□ -1.09
CCDC115-202ENST00000409127 KRTAP19-7Q3SYF9 63 aa8.17□□□□□ -1.1
CCDC115-202ENST00000409127 RPS28P62857 69 aaKnown RBP8.14□□□□□ -1.11
CCDC115-202ENST00000409127 MT1EP04732 61 aa8.11□□□□□ -1.11
CCDC115-202ENST00000409127 KRTAP19-5Q3LI72 72 aa8.07□□□□□ -1.12
CCDC115-202ENST00000409127 KRTAP2-2Q9BYT5 123 aa8.07□□□□□ -1.12
CCDC115-202ENST00000409127 KRTAP2-1Q9BYU5 128 aa8.07□□□□□ -1.12
CCDC115-202ENST00000409127 A6NED7 52 aa8.05□□□□□ -1.12
CCDC115-202ENST00000409127 KRTAP19-3Q7Z4W3 81 aa8.02□□□□□ -1.13
CCDC115-202ENST00000409127 LCE3AQ5TA76 89 aa8.01□□□□□ -1.13
CCDC115-202ENST00000409127 LCE3BQ5TA77 95 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms