RNA–Protein interactions for RNA: ENST00000409096.5

CUL3-203, Transcript of cullin 3, humanhuman

TSL 1 (best) BASIC

Gene CUL3, Length 2,701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-203ENST00000409096 LINC00575Q6W349 94 aa0.67□□□□□ -2.3
CUL3-203ENST00000409096 SMR3AQ99954 134 aa0.67□□□□□ -2.3
CUL3-203ENST00000409096 APOBP04114 4563 aaKnown RBP0.67□□□□□ -2.3
CUL3-203ENST00000409096 A0A1B0GU69 56 aa0.66□□□□□ -2.3
CUL3-203ENST00000409096 NDUFA4O00483 81 aa0.66□□□□□ -2.3
CUL3-203ENST00000409096 PLNP26678 52 aa0.66□□□□□ -2.3
CUL3-203ENST00000409096 WFDC9Q8NEX5 89 aa0.66□□□□□ -2.3
CUL3-203ENST00000409096 XIRP2A4UGR9 3374 aa0.66□□□□□ -2.3
CUL3-203ENST00000409096 CPSF4LA6NMK7 179 aaKnown RBP0.66□□□□□ -2.3
CUL3-203ENST00000409096 RPL37P61927 97 aaKnown RBP0.66□□□□□ -2.3
CUL3-203ENST00000409096 I3L3M4 83 aa0.66□□□□□ -2.3
CUL3-203ENST00000409096 PRB3Q04118 309 aaPredicted RBP0.66□□□□□ -2.3
CUL3-203ENST00000409096 DEFB131BA0A096LNP1 70 aa0.65□□□□□ -2.31
CUL3-203ENST00000409096 FCER1GP30273 86 aa0.65□□□□□ -2.31
CUL3-203ENST00000409096 ETDCA0A1B0GVM5 59 aa0.65□□□□□ -2.31
CUL3-203ENST00000409096 SNRPGP62308 76 aaKnown RBP0.65□□□□□ -2.31
CUL3-203ENST00000409096 GCC2Q8IWJ2 1684 aa0.64□□□□□ -2.31
CUL3-203ENST00000409096 ACACAQ13085 2346 aa0.64□□□□□ -2.31
CUL3-203ENST00000409096 H0YGX0 51 aa0.64□□□□□ -2.31
CUL3-203ENST00000409096 M0R1W7 72 aa0.64□□□□□ -2.31
CUL3-203ENST00000409096 DNAH17Q9UFH2 4485 aa0.63□□□□□ -2.31
CUL3-203ENST00000409096 K7EIL1 84 aa0.63□□□□□ -2.31
CUL3-203ENST00000409096 TRIOO75962 3097 aa0.63□□□□□ -2.31
CUL3-203ENST00000409096 RPL38P63173 70 aaKnown RBP0.63□□□□□ -2.31
CUL3-203ENST00000409096 MRPL33O75394 65 aaKnown RBP0.62□□□□□ -2.31
CUL3-203ENST00000409096 COX6B2Q6YFQ2 88 aa0.62□□□□□ -2.31
CUL3-203ENST00000409096 VPS13DQ5THJ4 4388 aa0.62□□□□□ -2.31
CUL3-203ENST00000409096 LYNX1G3V0Z9 82 aa0.62□□□□□ -2.31
CUL3-203ENST00000409096 CRIP1P50238 77 aa0.62□□□□□ -2.31
CUL3-203ENST00000409096 HAMPP81172 84 aa0.62□□□□□ -2.31
CUL3-203ENST00000409096 SSBP3-AS1Q7Z2R9 100 aa0.62□□□□□ -2.31
CUL3-203ENST00000409096 I3L2K1 104 aa0.61□□□□□ -2.31
CUL3-203ENST00000409096 SPTY2D1-AS1A0A0U1RR47 76 aa0.61□□□□□ -2.31
CUL3-203ENST00000409096 K7EQZ3 153 aa0.61□□□□□ -2.31
CUL3-203ENST00000409096 KNL1Q8NG31 2342 aa0.61□□□□□ -2.31
CUL3-203ENST00000409096 ATMQ13315 3056 aa0.6□□□□□ -2.31
CUL3-203ENST00000409096 MGAQ8IWI9 3026 aa0.6□□□□□ -2.31
CUL3-203ENST00000409096 Q8IZM0 81 aa0.6□□□□□ -2.31
CUL3-203ENST00000409096 UBE2DNLQ8IWF7 75 aa0.59□□□□□ -2.31
CUL3-203ENST00000409096 CDKN2A-AS1Q9UH64 79 aa0.59□□□□□ -2.31
CUL3-203ENST00000409096 PLCE1Q9P212 2302 aa0.59□□□□□ -2.31
CUL3-203ENST00000409096 USMG5Q96IX5 58 aa0.59□□□□□ -2.32
CUL3-203ENST00000409096 CRIPTQ9P021 101 aa0.59□□□□□ -2.32
CUL3-203ENST00000409096 LINC00158P58513 81 aa0.58□□□□□ -2.32
CUL3-203ENST00000409096 CNFNQ9BYD5 112 aa0.58□□□□□ -2.32
CUL3-203ENST00000409096 TP53AIP1Q9HCN2 124 aa0.58□□□□□ -2.32
CUL3-203ENST00000409096 TMEM167BQ9NRX6 74 aa0.58□□□□□ -2.32
CUL3-203ENST00000409096 NDUFA3O95167 84 aa0.58□□□□□ -2.32
CUL3-203ENST00000409096 FXYD6P3P58550 94 aa0.58□□□□□ -2.32
CUL3-203ENST00000409096 COX6A2Q02221 97 aa0.58□□□□□ -2.32
CUL3-203ENST00000409096 MRPL34Q9BQ48 92 aaKnown RBP0.58□□□□□ -2.32
CUL3-203ENST00000409096 FLGP20930 4061 aaPredicted RBP0.58□□□□□ -2.32
CUL3-203ENST00000409096 CCL22O00626 93 aa0.58□□□□□ -2.32
CUL3-203ENST00000409096 SPINK4O60575 86 aa0.58□□□□□ -2.32
CUL3-203ENST00000409096 C10orf95Q9H7T3 257 aa0.58□□□□□ -2.32
CUL3-203ENST00000409096 H0YAA0 97 aa0.57□□□□□ -2.32
CUL3-203ENST00000409096 MYO15AQ9UKN7 3530 aa0.57□□□□□ -2.32
CUL3-203ENST00000409096 PIGYQ3MUY2 71 aa0.57□□□□□ -2.32
CUL3-203ENST00000409096 LINC00308Q8TCZ7 52 aa0.57□□□□□ -2.32
CUL3-203ENST00000409096 USF3Q68DE3 2245 aa0.56□□□□□ -2.32
CUL3-203ENST00000409096 Q5VSD8 79 aa0.56□□□□□ -2.32
CUL3-203ENST00000409096 SMIM2Q9BVW6 85 aa0.56□□□□□ -2.32
CUL3-203ENST00000409096 MUC17Q685J3 4493 aa0.56□□□□□ -2.32
CUL3-203ENST00000409096 NDUFA1O15239 70 aa0.55□□□□□ -2.32
CUL3-203ENST00000409096 MT4P47944 62 aa0.55□□□□□ -2.32
CUL3-203ENST00000409096 DEFB104AQ8WTQ1 72 aa0.55□□□□□ -2.32
CUL3-203ENST00000409096 SPINK9Q5DT21 86 aa0.54□□□□□ -2.32
CUL3-203ENST00000409096 SPRR1AP35321 89 aa0.54□□□□□ -2.32
CUL3-203ENST00000409096 TIMM8BQ9Y5J9 83 aaPredicted RBP0.54□□□□□ -2.32
CUL3-203ENST00000409096 IGLV5-48A0A075B6I7 105 aa0.53□□□□□ -2.32
CUL3-203ENST00000409096 RPS27P42677 84 aaKnown RBP0.53□□□□□ -2.32
CUL3-203ENST00000409096 RPS27LQ71UM5 84 aaKnown RBP0.53□□□□□ -2.32
CUL3-203ENST00000409096 C6orf48Q9UBA6 75 aa0.53□□□□□ -2.32
CUL3-203ENST00000409096 LPAP08519 4548 aa0.53□□□□□ -2.33
CUL3-203ENST00000409096 WNK2Q9Y3S1 2297 aa0.52□□□□□ -2.33
CUL3-203ENST00000409096 TFF3Q07654 80 aa0.52□□□□□ -2.33
CUL3-203ENST00000409096 H1FX-AS1Q4G0G2 97 aa0.52□□□□□ -2.33
CUL3-203ENST00000409096 MINOS1Q5TGZ0 78 aa0.52□□□□□ -2.33
CUL3-203ENST00000409096 A0A0D9SG42 100 aa0.51□□□□□ -2.33
CUL3-203ENST00000409096 POLR2KP53803 58 aaKnown RBP0.51□□□□□ -2.33
CUL3-203ENST00000409096 LAMA5O15230 3695 aa0.51□□□□□ -2.33
CUL3-203ENST00000409096 DEFB130BP0DP73 79 aa0.51□□□□□ -2.33
CUL3-203ENST00000409096 DEFB130AP0DP74 79 aa0.51□□□□□ -2.33
CUL3-203ENST00000409096 IAPPP10997 89 aa0.5□□□□□ -2.33
CUL3-203ENST00000409096 SPRR1BP22528 89 aa0.5□□□□□ -2.33
CUL3-203ENST00000409096 WFDC13Q8IUB5 93 aa0.5□□□□□ -2.33
CUL3-203ENST00000409096 PRO0255Q9UI72 69 aa0.5□□□□□ -2.33
CUL3-203ENST00000409096 WT1-ASQ06250 92 aa0.5□□□□□ -2.33
CUL3-203ENST00000409096 KRTAP19-3Q7Z4W3 81 aa0.5□□□□□ -2.33
CUL3-203ENST00000409096 DEFB105AQ8NG35 78 aa0.5□□□□□ -2.33
CUL3-203ENST00000409096 MUC16Q8WXI7 14507 aa0.49□□□□□ -2.33
CUL3-203ENST00000409096 KRTAP20-2Q3LI61 65 aa0.49□□□□□ -2.33
CUL3-203ENST00000409096 DEFB131AP59861 70 aa0.49□□□□□ -2.33
CUL3-203ENST00000409096 H3BUA1 57 aa0.48□□□□□ -2.33
CUL3-203ENST00000409096 SMR3BP02814 79 aaPredicted RBP0.48□□□□□ -2.33
CUL3-203ENST00000409096 APLNQ9ULZ1 77 aa0.48□□□□□ -2.33
CUL3-203ENST00000409096 MMP24-AS1A0A0U1RRL7 71 aa0.47□□□□□ -2.33
CUL3-203ENST00000409096 CSMD3Q7Z407 3707 aa0.47□□□□□ -2.33
CUL3-203ENST00000409096 ARHGAP5-AS1Q96IT6 56 aa0.47□□□□□ -2.33
CUL3-203ENST00000409096 DEFB109BQ30KR1 87 aa0.46□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms