RNA–Protein interactions for RNA: ENST00000409012.4

TPRN-202, Transcript of taperin, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPRN, Length 2,718 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPRN-202ENST00000409012 FAT3Q8TDW7 4589 aa12□□□□□ -0.49
TPRN-202ENST00000409012 HERC2O95714 4834 aa11.96□□□□□ -0.5
TPRN-202ENST00000409012 TNXBP22105 4242 aa11.95□□□□□ -0.5
TPRN-202ENST00000409012 A8MUU9 505 aa11.93□□□□□ -0.5
TPRN-202ENST00000409012 C20orf166-AS1Q96NR2 134 aa11.93□□□□□ -0.5
TPRN-202ENST00000409012 DMBT1Q9UGM3 2413 aaPredicted RBP11.84□□□□□ -0.51
TPRN-202ENST00000409012 PCLOQ9Y6V0 5065 aa11.75□□□□□ -0.53
TPRN-202ENST00000409012 KRTAP25-1Q3LHN0 102 aa11.74□□□□□ -0.53
TPRN-202ENST00000409012 ROMO1P60602 79 aa11.73□□□□□ -0.53
TPRN-202ENST00000409012 KRTAP3-1Q9BYR8 98 aa11.73□□□□□ -0.53
TPRN-202ENST00000409012 KRTAP10-8P60410 259 aa11.71□□□□□ -0.53
TPRN-202ENST00000409012 H0YAA0 97 aa11.67□□□□□ -0.54
TPRN-202ENST00000409012 MT1HL1P0DM35 61 aa11.63□□□□□ -0.55
TPRN-202ENST00000409012 CRIPTQ9P021 101 aa11.57□□□□□ -0.56
TPRN-202ENST00000409012 COX6B2Q6YFQ2 88 aa11.55□□□□□ -0.56
TPRN-202ENST00000409012 HERC1Q15751 4861 aa11.51□□□□□ -0.57
TPRN-202ENST00000409012 P0C880 135 aa11.46□□□□□ -0.57
TPRN-202ENST00000409012 XP32Q5T750 250 aa11.45□□□□□ -0.58
TPRN-202ENST00000409012 A0A1B0GU33 70 aa11.45□□□□□ -0.58
TPRN-202ENST00000409012 RPL37P61927 97 aaKnown RBP11.44□□□□□ -0.58
TPRN-202ENST00000409012 LPAP08519 4548 aa11.42□□□□□ -0.58
TPRN-202ENST00000409012 H1FX-AS1Q4G0G2 97 aa11.39□□□□□ -0.59
TPRN-202ENST00000409012 J3QL48 77 aa11.39□□□□□ -0.59
TPRN-202ENST00000409012 LRP2P98164 4655 aa11.27□□□□□ -0.61
TPRN-202ENST00000409012 K7ERS5 55 aa11.23□□□□□ -0.61
TPRN-202ENST00000409012 KRTAP3-3Q9BYR6 98 aa11.23□□□□□ -0.61
TPRN-202ENST00000409012 S4R3F8 94 aa11.19□□□□□ -0.62
TPRN-202ENST00000409012 SPINT4Q6UDR6 99 aa11.14□□□□□ -0.63
TPRN-202ENST00000409012 HMCN2Q8NDA2 5059 aa11.11□□□□□ -0.63
TPRN-202ENST00000409012 KRTAP10-6P60371 365 aaPredicted RBP11.1□□□□□ -0.63
TPRN-202ENST00000409012 TPRXLQ17RH7 258 aa11.06□□□□□ -0.64
TPRN-202ENST00000409012 KRTAP3-2Q9BYR7 98 aa11.03□□□□□ -0.64
TPRN-202ENST00000409012 NDUFAF8A1L188 74 aa11□□□□□ -0.65
TPRN-202ENST00000409012 KRTAP13-4Q3LI77 160 aa11□□□□□ -0.65
TPRN-202ENST00000409012 A0A0D9SG42 100 aa10.99□□□□□ -0.65
TPRN-202ENST00000409012 C10orf95Q9H7T3 257 aa10.97□□□□□ -0.65
TPRN-202ENST00000409012 MUC2Q02817 5179 aa10.91□□□□□ -0.66
TPRN-202ENST00000409012 KRTAP15-1Q3LI76 137 aa10.89□□□□□ -0.67
TPRN-202ENST00000409012 UBR4Q5T4S7 5183 aa10.83□□□□□ -0.68
TPRN-202ENST00000409012 RNF213Q63HN8 5207 aa10.73□□□□□ -0.69
TPRN-202ENST00000409012 MUC17Q685J3 4493 aa10.64□□□□□ -0.71
TPRN-202ENST00000409012 KRTAP12-2P59991 146 aa10.64□□□□□ -0.71
TPRN-202ENST00000409012 SEC61BP60468 96 aaKnown RBP10.64□□□□□ -0.71
TPRN-202ENST00000409012 KRTAP4-1Q9BYQ7 146 aa10.63□□□□□ -0.71
TPRN-202ENST00000409012 M0QZ58 72 aa10.56□□□□□ -0.72
TPRN-202ENST00000409012 KRTAP12-1P59990 96 aa10.56□□□□□ -0.72
TPRN-202ENST00000409012 A0A0A0MQY5 61 aa10.47□□□□□ -0.73
TPRN-202ENST00000409012 FAT4Q6V0I7 4981 aa10.44□□□□□ -0.74
TPRN-202ENST00000409012 R4GN34 69 aa10.41□□□□□ -0.74
TPRN-202ENST00000409012 KRTAP19-2Q3LHN2 52 aa10.36□□□□□ -0.75
TPRN-202ENST00000409012 LORP23490 312 aaPredicted RBP10.31□□□□□ -0.76
TPRN-202ENST00000409012 LUZP6Q538Z0 58 aa10.18□□□□□ -0.78
TPRN-202ENST00000409012 FLGP20930 4061 aaPredicted RBP10.11□□□□□ -0.79
TPRN-202ENST00000409012 PLAC4Q8WY50 150 aa10.07□□□□□ -0.8
TPRN-202ENST00000409012 LCE2CQ5TA81 110 aa10.01□□□□□ -0.81
TPRN-202ENST00000409012 CAMK2N1Q7Z7J9 78 aa9.88□□□□□ -0.83
TPRN-202ENST00000409012 MT1HP80294 61 aa9.82□□□□□ -0.84
TPRN-202ENST00000409012 M0R2T5 61 aa9.76□□□□□ -0.85
TPRN-202ENST00000409012 PP632Q6XCG6 107 aa9.53□□□□□ -0.88
TPRN-202ENST00000409012 LCE2AQ5TA79 106 aaPredicted RBP9.52□□□□□ -0.89
TPRN-202ENST00000409012 KRTAP19-1Q8IUB9 90 aa9.47□□□□□ -0.89
TPRN-202ENST00000409012 SPRR2GQ9BYE4 73 aa9.46□□□□□ -0.9
TPRN-202ENST00000409012 TNP1P09430 55 aa9.45□□□□□ -0.9
TPRN-202ENST00000409012 KRTAP9-8Q9BYQ0 159 aa9.42□□□□□ -0.9
TPRN-202ENST00000409012 MT2AP02795 61 aa9.39□□□□□ -0.91
TPRN-202ENST00000409012 MT1FP04733 61 aa9.39□□□□□ -0.91
TPRN-202ENST00000409012 KRTAP10-10P60014 251 aa9.36□□□□□ -0.91
TPRN-202ENST00000409012 KRTAP23-1A1A580 65 aa9.19□□□□□ -0.94
TPRN-202ENST00000409012 SPRR5A0A1B0GTR4 108 aa9.17□□□□□ -0.94
TPRN-202ENST00000409012 USH2AO75445 5202 aa9.14□□□□□ -0.95
TPRN-202ENST00000409012 FSIP2Q5CZC0 6907 aa9.09□□□□□ -0.95
TPRN-202ENST00000409012 KRTAP9-3Q9BYQ3 159 aa9.06□□□□□ -0.96
TPRN-202ENST00000409012 KRTAP19-8Q3LI54 63 aa9.06□□□□□ -0.96
TPRN-202ENST00000409012 MT1BP07438 61 aa9.01□□□□□ -0.97
TPRN-202ENST00000409012 LCE3AQ5TA76 89 aa8.97□□□□□ -0.97
TPRN-202ENST00000409012 LCE2BO14633 110 aa8.94□□□□□ -0.98
TPRN-202ENST00000409012 PRO2289Q9P1D8 64 aa8.91□□□□□ -0.98
TPRN-202ENST00000409012 KRTAP10-5P60370 271 aa8.9□□□□□ -0.98
TPRN-202ENST00000409012 MT1XP80297 61 aa8.89□□□□□ -0.99
TPRN-202ENST00000409012 SSPOA2VEC9 5147 aa8.76□□□□□ -1.01
TPRN-202ENST00000409012 KRTAP8-1Q8IUC2 63 aa8.68□□□□□ -1.02
TPRN-202ENST00000409012 KRTAP10-7P60409 375 aaPredicted RBP8.66□□□□□ -1.02
TPRN-202ENST00000409012 KRTAP10-12P60413 245 aa8.66□□□□□ -1.02
TPRN-202ENST00000409012 INE1O15225 51 aa8.62□□□□□ -1.03
TPRN-202ENST00000409012 LCE2DQ5TA82 110 aaPredicted RBP8.56□□□□□ -1.04
TPRN-202ENST00000409012 KRTAP9-2Q9BYQ4 174 aa8.55□□□□□ -1.04
TPRN-202ENST00000409012 KRTAP12-3P60328 96 aa8.54□□□□□ -1.04
TPRN-202ENST00000409012 KMT2DO14686 5537 aa8.39□□□□□ -1.07
TPRN-202ENST00000409012 FCGBPQ9Y6R7 5405 aaPredicted RBP8.36□□□□□ -1.07
TPRN-202ENST00000409012 KRTAP19-6Q3LI70 58 aa8.26□□□□□ -1.09
TPRN-202ENST00000409012 KRTAP19-5Q3LI72 72 aa8.24□□□□□ -1.09
TPRN-202ENST00000409012 KRTAP4-8A0A0G2JLE6 195 aa8.22□□□□□ -1.09
TPRN-202ENST00000409012 KRTAP4-8Q9BYQ9 185 aa8.22□□□□□ -1.09
TPRN-202ENST00000409012 CRCT1Q9UGL9 99 aa8.17□□□□□ -1.1
TPRN-202ENST00000409012 MACF1Q9UPN3 7388 aaKnown RBP8.09□□□□□ -1.11
TPRN-202ENST00000409012 LCE3CQ5T5A8 94 aa8.02□□□□□ -1.12
TPRN-202ENST00000409012 SYNE2Q8WXH0 6885 aaKnown RBP7.96□□□□□ -1.13
TPRN-202ENST00000409012 KRTAP19-7Q3SYF9 63 aa7.93□□□□□ -1.14
TPRN-202ENST00000409012 KRTAP9-6A0A140TA67 174 aa7.89□□□□□ -1.15
TPRN-202ENST00000409012 KRTAP4-7Q9BYR0 210 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms