RNA–Protein interactions for RNA: ENST00000407249.7

CDK11B-204, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best) BASIC

Gene CDK11B, Length 2,677 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-204ENST00000407249 RYR3Q15413 4870 aa8.85□□□□□ -0.99
CDK11B-204ENST00000407249 APOBP04114 4563 aaKnown RBP8.82□□□□□ -1
CDK11B-204ENST00000407249 TPRXLQ17RH7 258 aa8.82□□□□□ -1
CDK11B-204ENST00000407249 KMT2CQ8NEZ4 4911 aaKnown RBP8.8□□□□□ -1
CDK11B-204ENST00000407249 KRTAP3-1Q9BYR8 98 aa8.74□□□□□ -1.01
CDK11B-204ENST00000407249 PKHD1L1Q86WI1 4243 aa8.72□□□□□ -1.01
CDK11B-204ENST00000407249 A0A1B0GU33 70 aa8.71□□□□□ -1.01
CDK11B-204ENST00000407249 C9orf92A6NGG3 77 aa8.69□□□□□ -1.02
CDK11B-204ENST00000407249 H1FX-AS1Q4G0G2 97 aa8.66□□□□□ -1.02
CDK11B-204ENST00000407249 Q5VSD8 79 aa8.66□□□□□ -1.02
CDK11B-204ENST00000407249 FAT1Q14517 4588 aa8.64□□□□□ -1.03
CDK11B-204ENST00000407249 KRTAP10-8P60410 259 aa8.6□□□□□ -1.03
CDK11B-204ENST00000407249 C10orf95Q9H7T3 257 aa8.57□□□□□ -1.04
CDK11B-204ENST00000407249 EPPK1P58107 5090 aaKnown RBP8.54□□□□□ -1.04
CDK11B-204ENST00000407249 COX6B2Q6YFQ2 88 aa8.53□□□□□ -1.04
CDK11B-204ENST00000407249 CAMK2N1Q7Z7J9 78 aa8.53□□□□□ -1.04
CDK11B-204ENST00000407249 HSPG2P98160 4391 aa8.49□□□□□ -1.05
CDK11B-204ENST00000407249 RYR1P21817 5038 aa8.47□□□□□ -1.05
CDK11B-204ENST00000407249 HERC2O95714 4834 aa8.46□□□□□ -1.06
CDK11B-204ENST00000407249 TNXBP22105 4242 aa8.41□□□□□ -1.06
CDK11B-204ENST00000407249 RPL37P61927 97 aaKnown RBP8.39□□□□□ -1.07
CDK11B-204ENST00000407249 KRTAP10-6P60371 365 aaPredicted RBP8.36□□□□□ -1.07
CDK11B-204ENST00000407249 FAT3Q8TDW7 4589 aa8.36□□□□□ -1.07
CDK11B-204ENST00000407249 MT1HL1P0DM35 61 aa8.36□□□□□ -1.07
CDK11B-204ENST00000407249 KRTAP3-3Q9BYR6 98 aa8.36□□□□□ -1.07
CDK11B-204ENST00000407249 KRTAP13-4Q3LI77 160 aa8.31□□□□□ -1.08
CDK11B-204ENST00000407249 DMBT1Q9UGM3 2413 aaPredicted RBP8.3□□□□□ -1.08
CDK11B-204ENST00000407249 LRP1Q07954 4544 aaKnown RBP8.29□□□□□ -1.08
CDK11B-204ENST00000407249 KRTAP3-2Q9BYR7 98 aa8.28□□□□□ -1.08
CDK11B-204ENST00000407249 XP32Q5T750 250 aa8.28□□□□□ -1.08
CDK11B-204ENST00000407249 A0A0D9SG42 100 aa8.25□□□□□ -1.09
CDK11B-204ENST00000407249 KIAA1109Q2LD37 5005 aa8.23□□□□□ -1.09
CDK11B-204ENST00000407249 PCLOQ9Y6V0 5065 aa8.23□□□□□ -1.09
CDK11B-204ENST00000407249 S4R3F8 94 aa8.2□□□□□ -1.1
CDK11B-204ENST00000407249 PLAC4Q8WY50 150 aa8.14□□□□□ -1.11
CDK11B-204ENST00000407249 MYCBP2O75592 4640 aa8.09□□□□□ -1.11
CDK11B-204ENST00000407249 KRTAP4-5Q9BYR2 181 aa8.07□□□□□ -1.12
CDK11B-204ENST00000407249 PRO2289Q9P1D8 64 aa8.06□□□□□ -1.12
CDK11B-204ENST00000407249 KRTAP12-2P59991 146 aa8.06□□□□□ -1.12
CDK11B-204ENST00000407249 KRTAP12-1P59990 96 aa7.98□□□□□ -1.13
CDK11B-204ENST00000407249 M0QZ58 72 aa7.89□□□□□ -1.15
CDK11B-204ENST00000407249 LPAP08519 4548 aa7.89□□□□□ -1.15
CDK11B-204ENST00000407249 ABCA13Q86UQ4 5058 aa7.83□□□□□ -1.16
CDK11B-204ENST00000407249 R4GN34 69 aa7.82□□□□□ -1.16
CDK11B-204ENST00000407249 LRP2P98164 4655 aa7.79□□□□□ -1.16
CDK11B-204ENST00000407249 MUC17Q685J3 4493 aa7.63□□□□□ -1.19
CDK11B-204ENST00000407249 INE1O15225 51 aa7.61□□□□□ -1.19
CDK11B-204ENST00000407249 KRTAP4-1Q9BYQ7 146 aa7.6□□□□□ -1.19
CDK11B-204ENST00000407249 LORP23490 312 aaPredicted RBP7.52□□□□□ -1.21
CDK11B-204ENST00000407249 HERC1Q15751 4861 aa7.5□□□□□ -1.21
CDK11B-204ENST00000407249 KRTAP19-2Q3LHN2 52 aa7.49□□□□□ -1.21
CDK11B-204ENST00000407249 KRTAP23-1A1A580 65 aa7.46□□□□□ -1.22
CDK11B-204ENST00000407249 SPRR5A0A1B0GTR4 108 aa7.39□□□□□ -1.23
CDK11B-204ENST00000407249 PP632Q6XCG6 107 aa7.38□□□□□ -1.23
CDK11B-204ENST00000407249 UBR4Q5T4S7 5183 aa7.38□□□□□ -1.23
CDK11B-204ENST00000407249 HMCN2Q8NDA2 5059 aa7.34□□□□□ -1.24
CDK11B-204ENST00000407249 FLGP20930 4061 aaPredicted RBP7.23□□□□□ -1.25
CDK11B-204ENST00000407249 LCE2CQ5TA81 110 aa7.16□□□□□ -1.26
CDK11B-204ENST00000407249 KRTAP9-6A0A140TA67 174 aa7.14□□□□□ -1.27
CDK11B-204ENST00000407249 KRTAP9-2Q9BYQ4 174 aa7.09□□□□□ -1.27
CDK11B-204ENST00000407249 MUC2Q02817 5179 aa7.09□□□□□ -1.28
CDK11B-204ENST00000407249 TNP1P09430 55 aa7.04□□□□□ -1.28
CDK11B-204ENST00000407249 MT1HP80294 61 aa7.01□□□□□ -1.29
CDK11B-204ENST00000407249 M0R2T5 61 aa6.99□□□□□ -1.29
CDK11B-204ENST00000407249 RNF213Q63HN8 5207 aa6.95□□□□□ -1.3
CDK11B-204ENST00000407249 SPRR2GQ9BYE4 73 aa6.9□□□□□ -1.3
CDK11B-204ENST00000407249 MT2AP02795 61 aa6.83□□□□□ -1.32
CDK11B-204ENST00000407249 KRTAP19-1Q8IUB9 90 aa6.81□□□□□ -1.32
CDK11B-204ENST00000407249 KRTAP9-8Q9BYQ0 159 aa6.8□□□□□ -1.32
CDK11B-204ENST00000407249 KRTAP10-10P60014 251 aa6.79□□□□□ -1.32
CDK11B-204ENST00000407249 MT1FP04733 61 aa6.78□□□□□ -1.32
CDK11B-204ENST00000407249 FAT4Q6V0I7 4981 aa6.76□□□□□ -1.33
CDK11B-204ENST00000407249 LCE2AQ5TA79 106 aaPredicted RBP6.71□□□□□ -1.34
CDK11B-204ENST00000407249 LCE2DQ5TA82 110 aaPredicted RBP6.69□□□□□ -1.34
CDK11B-204ENST00000407249 KRTAP19-8Q3LI54 63 aa6.67□□□□□ -1.34
CDK11B-204ENST00000407249 LCE3AQ5TA76 89 aa6.64□□□□□ -1.35
CDK11B-204ENST00000407249 CRCT1Q9UGL9 99 aa6.61□□□□□ -1.35
CDK11B-204ENST00000407249 KRTAP9-3Q9BYQ3 159 aa6.54□□□□□ -1.36
CDK11B-204ENST00000407249 MT1BP07438 61 aa6.51□□□□□ -1.37
CDK11B-204ENST00000407249 KRTAP8-1Q8IUC2 63 aa6.5□□□□□ -1.37
CDK11B-204ENST00000407249 KRTAP10-5P60370 271 aa6.38□□□□□ -1.39
CDK11B-204ENST00000407249 MT1XP80297 61 aa6.38□□□□□ -1.39
CDK11B-204ENST00000407249 KRTAP12-3P60328 96 aa6.32□□□□□ -1.4
CDK11B-204ENST00000407249 KRTAP9-7A8MTY7 169 aa6.31□□□□□ -1.4
CDK11B-204ENST00000407249 KRTAP10-12P60413 245 aa6.3□□□□□ -1.4
CDK11B-204ENST00000407249 LCE2BO14633 110 aa6.27□□□□□ -1.41
CDK11B-204ENST00000407249 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.2□□□□□ -1.42
CDK11B-204ENST00000407249 KRTAP10-7P60409 375 aaPredicted RBP6.2□□□□□ -1.42
CDK11B-204ENST00000407249 KRTAP19-5Q3LI72 72 aa5.98□□□□□ -1.45
CDK11B-204ENST00000407249 LCE3CQ5T5A8 94 aa5.97□□□□□ -1.45
CDK11B-204ENST00000407249 USH2AO75445 5202 aa5.93□□□□□ -1.46
CDK11B-204ENST00000407249 SSPOA2VEC9 5147 aa5.87□□□□□ -1.47
CDK11B-204ENST00000407249 KRTAP19-6Q3LI70 58 aa5.86□□□□□ -1.47
CDK11B-204ENST00000407249 KMT2DO14686 5537 aa5.84□□□□□ -1.48
CDK11B-204ENST00000407249 FSIP2Q5CZC0 6907 aa5.83□□□□□ -1.48
CDK11B-204ENST00000407249 KRTAP9-6A8MVA2 160 aa5.8□□□□□ -1.48
CDK11B-204ENST00000407249 KRTAP4-8A0A0G2JLE6 195 aa5.77□□□□□ -1.49
CDK11B-204ENST00000407249 KRTAP4-8Q9BYQ9 185 aa5.77□□□□□ -1.49
CDK11B-204ENST00000407249 KRTAP19-4Q3LI73 84 aa5.71□□□□□ -1.49
CDK11B-204ENST00000407249 KRTAP2-2Q9BYT5 123 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms