RNA–Protein interactions for RNA: ENST00000406938.2

CHKB-201, Transcript of choline kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHKB, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-201ENST00000406938 Q1T7F1 81 aa10.13□□□□□ -0.79
CHKB-201ENST00000406938 ACYP2P14621 99 aa10.08□□□□□ -0.8
CHKB-201ENST00000406938 FLGP20930 4061 aaPredicted RBP10.05□□□□□ -0.8
CHKB-201ENST00000406938 COA5Q86WW8 74 aa10.05□□□□□ -0.8
CHKB-201ENST00000406938 S4R3F8 94 aa10.04□□□□□ -0.8
CHKB-201ENST00000406938 MT1HP80294 61 aa10.03□□□□□ -0.8
CHKB-201ENST00000406938 LCA10Q71F78 164 aa10.01□□□□□ -0.81
CHKB-201ENST00000406938 SVIPQ8NHG7 77 aa10.01□□□□□ -0.81
CHKB-201ENST00000406938 CHKB-CPT1BH3BT56 60 aa9.93□□□□□ -0.82
CHKB-201ENST00000406938 KRTAP3-3Q9BYR6 98 aa9.93□□□□□ -0.82
CHKB-201ENST00000406938 M0R2T5 61 aa9.9□□□□□ -0.82
CHKB-201ENST00000406938 LCE2AQ5TA79 106 aaPredicted RBP9.86□□□□□ -0.83
CHKB-201ENST00000406938 CSAG1Q6PB30 78 aa9.84□□□□□ -0.83
CHKB-201ENST00000406938 PRO0628Q9UI54 55 aa9.84□□□□□ -0.83
CHKB-201ENST00000406938 LINC01558Q9Y6Z2 57 aa9.82□□□□□ -0.84
CHKB-201ENST00000406938 SPTSSBQ8NFR3 76 aa9.78□□□□□ -0.84
CHKB-201ENST00000406938 PSPHP1O15172 72 aa9.76□□□□□ -0.85
CHKB-201ENST00000406938 BRK1Q8WUW1 75 aa9.74□□□□□ -0.85
CHKB-201ENST00000406938 Q5VV11 94 aa9.73□□□□□ -0.85
CHKB-201ENST00000406938 PRR15LQ9BU68 103 aa9.73□□□□□ -0.85
CHKB-201ENST00000406938 KRTAP10-6P60371 365 aaPredicted RBP9.7□□□□□ -0.86
CHKB-201ENST00000406938 LORP23490 312 aaPredicted RBP9.66□□□□□ -0.86
CHKB-201ENST00000406938 KRTAP9-8Q9BYQ0 159 aa9.6□□□□□ -0.87
CHKB-201ENST00000406938 H0YAA0 97 aa9.59□□□□□ -0.87
CHKB-201ENST00000406938 A0A1B0GU69 56 aa9.56□□□□□ -0.88
CHKB-201ENST00000406938 A6NED7 52 aa9.56□□□□□ -0.88
CHKB-201ENST00000406938 ADM2Q7Z4H4 148 aa9.56□□□□□ -0.88
CHKB-201ENST00000406938 MT2AP02795 61 aa9.55□□□□□ -0.88
CHKB-201ENST00000406938 SEC61GP60059 68 aa9.53□□□□□ -0.88
CHKB-201ENST00000406938 CDC42SE1Q9NRR8 79 aa9.51□□□□□ -0.89
CHKB-201ENST00000406938 MT1FP04733 61 aa9.49□□□□□ -0.89
CHKB-201ENST00000406938 KRTAP3-2Q9BYR7 98 aa9.49□□□□□ -0.89
CHKB-201ENST00000406938 P0C880 135 aa9.45□□□□□ -0.9
CHKB-201ENST00000406938 KRTAP10-10P60014 251 aa9.45□□□□□ -0.9
CHKB-201ENST00000406938 UQCR11O14957 56 aa9.37□□□□□ -0.91
CHKB-201ENST00000406938 SPATA8Q6RVD6 105 aa9.29□□□□□ -0.92
CHKB-201ENST00000406938 CRIPTQ9P021 101 aa9.28□□□□□ -0.92
CHKB-201ENST00000406938 KRTAP9-3Q9BYQ3 159 aa9.27□□□□□ -0.93
CHKB-201ENST00000406938 PMAIP1Q13794 54 aa9.26□□□□□ -0.93
CHKB-201ENST00000406938 R4GN34 69 aa9.24□□□□□ -0.93
CHKB-201ENST00000406938 MIR22HGQ0VDD5 57 aa9.23□□□□□ -0.93
CHKB-201ENST00000406938 A0A1B0GU33 70 aa9.23□□□□□ -0.93
CHKB-201ENST00000406938 M0QZ58 72 aa9.22□□□□□ -0.93
CHKB-201ENST00000406938 A8MU10 97 aa9.2□□□□□ -0.94
CHKB-201ENST00000406938 KRTAP19-1Q8IUB9 90 aa9.2□□□□□ -0.94
CHKB-201ENST00000406938 SPRR2GQ9BYE4 73 aa9.18□□□□□ -0.94
CHKB-201ENST00000406938 KRTAP13-4Q3LI77 160 aa9.16□□□□□ -0.94
CHKB-201ENST00000406938 A6NN06 94 aa9.12□□□□□ -0.95
CHKB-201ENST00000406938 LCE2BO14633 110 aa9.07□□□□□ -0.96
CHKB-201ENST00000406938 LINC01554Q52M75 96 aa9.06□□□□□ -0.96
CHKB-201ENST00000406938 LCE2DQ5TA82 110 aaPredicted RBP9.06□□□□□ -0.96
CHKB-201ENST00000406938 KTN1-AS1Q86SY8 53 aa9.05□□□□□ -0.96
CHKB-201ENST00000406938 KRTAP19-8Q3LI54 63 aa8.99□□□□□ -0.97
CHKB-201ENST00000406938 A0A0D9SG42 100 aa8.97□□□□□ -0.97
CHKB-201ENST00000406938 USH2AO75445 5202 aa8.92□□□□□ -0.98
CHKB-201ENST00000406938 MT1BP07438 61 aa8.91□□□□□ -0.98
CHKB-201ENST00000406938 KRTAP9-2Q9BYQ4 174 aa8.91□□□□□ -0.98
CHKB-201ENST00000406938 K7ERS5 55 aa8.88□□□□□ -0.99
CHKB-201ENST00000406938 KRTAP12-1P59990 96 aa8.8□□□□□ -1
CHKB-201ENST00000406938 PLAC4Q8WY50 150 aa8.8□□□□□ -1
CHKB-201ENST00000406938 SPINT4Q6UDR6 99 aa8.77□□□□□ -1.01
CHKB-201ENST00000406938 KRTAP12-2P59991 146 aa8.76□□□□□ -1.01
CHKB-201ENST00000406938 FSIP2Q5CZC0 6907 aa8.76□□□□□ -1.01
CHKB-201ENST00000406938 SSPOA2VEC9 5147 aa8.7□□□□□ -1.02
CHKB-201ENST00000406938 CAMK2N1Q7Z7J9 78 aa8.62□□□□□ -1.03
CHKB-201ENST00000406938 KRTAP19-6Q3LI70 58 aa8.58□□□□□ -1.04
CHKB-201ENST00000406938 MT1XP80297 61 aa8.55□□□□□ -1.04
CHKB-201ENST00000406938 KRTAP10-5P60370 271 aa8.53□□□□□ -1.04
CHKB-201ENST00000406938 CRCT1Q9UGL9 99 aa8.53□□□□□ -1.04
CHKB-201ENST00000406938 PRO2289Q9P1D8 64 aa8.49□□□□□ -1.05
CHKB-201ENST00000406938 ROMO1P60602 79 aa8.47□□□□□ -1.05
CHKB-201ENST00000406938 PRAC1Q96KF2 57 aa8.46□□□□□ -1.06
CHKB-201ENST00000406938 FCGBPQ9Y6R7 5405 aaPredicted RBP8.37□□□□□ -1.07
CHKB-201ENST00000406938 C10orf95Q9H7T3 257 aa8.33□□□□□ -1.08
CHKB-201ENST00000406938 KRTAP9-6A0A140TA67 174 aa8.32□□□□□ -1.08
CHKB-201ENST00000406938 KRTAP25-1Q3LHN0 102 aa8.32□□□□□ -1.08
CHKB-201ENST00000406938 KRTAP10-7P60409 375 aaPredicted RBP8.19□□□□□ -1.1
CHKB-201ENST00000406938 TNP1P09430 55 aa8.13□□□□□ -1.11
CHKB-201ENST00000406938 KRTAP10-12P60413 245 aa8.11□□□□□ -1.11
CHKB-201ENST00000406938 MACF1Q9UPN3 7388 aaKnown RBP7.99□□□□□ -1.13
CHKB-201ENST00000406938 KMT2DO14686 5537 aa7.97□□□□□ -1.13
CHKB-201ENST00000406938 KRTAP4-8A0A0G2JLE6 195 aa7.95□□□□□ -1.14
CHKB-201ENST00000406938 KRTAP4-8Q9BYQ9 185 aa7.95□□□□□ -1.14
CHKB-201ENST00000406938 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.92□□□□□ -1.14
CHKB-201ENST00000406938 LCE3AQ5TA76 89 aa7.87□□□□□ -1.15
CHKB-201ENST00000406938 PP632Q6XCG6 107 aa7.84□□□□□ -1.15
CHKB-201ENST00000406938 KRTAP8-1Q8IUC2 63 aa7.82□□□□□ -1.16
CHKB-201ENST00000406938 SYNE2Q8WXH0 6885 aaKnown RBP7.79□□□□□ -1.16
CHKB-201ENST00000406938 KRTAP23-1A1A580 65 aa7.76□□□□□ -1.17
CHKB-201ENST00000406938 KRTAP19-5Q3LI72 72 aa7.65□□□□□ -1.18
CHKB-201ENST00000406938 KRTAP19-7Q3SYF9 63 aa7.63□□□□□ -1.19
CHKB-201ENST00000406938 KRTAP5-9P26371 169 aa7.62□□□□□ -1.19
CHKB-201ENST00000406938 KRTAP6-3Q3LI67 103 aa7.62□□□□□ -1.19
CHKB-201ENST00000406938 SPRR2FQ96RM1 72 aa7.6□□□□□ -1.19
CHKB-201ENST00000406938 KRTAP9-7A8MTY7 169 aa7.58□□□□□ -1.2
CHKB-201ENST00000406938 KRTAP12-3P60328 96 aa7.56□□□□□ -1.2
CHKB-201ENST00000406938 MT1EP04732 61 aa7.52□□□□□ -1.21
CHKB-201ENST00000406938 MUC12Q9UKN1 5478 aa7.48□□□□□ -1.21
CHKB-201ENST00000406938 KRTAP15-1Q3LI76 137 aa7.45□□□□□ -1.22
CHKB-201ENST00000406938 MDN1Q9NU22 5596 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms