RNA–Protein interactions for RNA: ENST00000406386.7

TRIOBP-204, Transcript of TRIO and F-actin binding protein, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIOBP, Length 10,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIOBP-204ENST00000406386 KRTAP3-2Q9BYR7 98 aa4.96□□□□□ -1.62
TRIOBP-204ENST00000406386 ZNF469Q96JG9 3925 aaPredicted RBP4.94□□□□□ -1.62
TRIOBP-204ENST00000406386 KRTAP10-5P60370 271 aa4.91□□□□□ -1.62
TRIOBP-204ENST00000406386 KRTAP3-3Q9BYR6 98 aa4.89□□□□□ -1.63
TRIOBP-204ENST00000406386 LCE3AQ5TA76 89 aa4.85□□□□□ -1.63
TRIOBP-204ENST00000406386 KMT2AQ03164 3969 aa4.84□□□□□ -1.64
TRIOBP-204ENST00000406386 MT1HL1P0DM35 61 aa4.76□□□□□ -1.65
TRIOBP-204ENST00000406386 KRTAP19-4Q3LI73 84 aa4.76□□□□□ -1.65
TRIOBP-204ENST00000406386 DNAH6Q9C0G6 4158 aa4.75□□□□□ -1.65
TRIOBP-204ENST00000406386 FRAS1Q86XX4 4008 aa4.73□□□□□ -1.65
TRIOBP-204ENST00000406386 KRTAP8-1Q8IUC2 63 aa4.72□□□□□ -1.65
TRIOBP-204ENST00000406386 VPS13BQ7Z7G8 4022 aa4.68□□□□□ -1.66
TRIOBP-204ENST00000406386 DNAH2Q9P225 4427 aa4.65□□□□□ -1.66
TRIOBP-204ENST00000406386 KRTAP10-4P60372 401 aaPredicted RBP4.58□□□□□ -1.68
TRIOBP-204ENST00000406386 FLGP20930 4061 aaPredicted RBP4.54□□□□□ -1.68
TRIOBP-204ENST00000406386 ANK3Q12955 4377 aaKnown RBP4.54□□□□□ -1.68
TRIOBP-204ENST00000406386 KRTAP4-5Q9BYR2 181 aa4.53□□□□□ -1.68
TRIOBP-204ENST00000406386 DNAH1Q9P2D7 4330 aa4.51□□□□□ -1.69
TRIOBP-204ENST00000406386 PRKDCP78527 4128 aaKnown RBP4.48□□□□□ -1.69
TRIOBP-204ENST00000406386 LORP23490 312 aaPredicted RBP4.47□□□□□ -1.69
TRIOBP-204ENST00000406386 HUWE1Q7Z6Z7 4374 aaKnown RBP4.47□□□□□ -1.69
TRIOBP-204ENST00000406386 KRTAP10-7P60409 375 aaPredicted RBP4.47□□□□□ -1.69
TRIOBP-204ENST00000406386 LCE3CQ5T5A8 94 aa4.39□□□□□ -1.71
TRIOBP-204ENST00000406386 KRTAP19-5Q3LI72 72 aa4.31□□□□□ -1.72
TRIOBP-204ENST00000406386 SPRR2GQ9BYE4 73 aa4.3□□□□□ -1.72
TRIOBP-204ENST00000406386 SPRR2FQ96RM1 72 aa4.29□□□□□ -1.72
TRIOBP-204ENST00000406386 PKHD1P08F94 4074 aa4.24□□□□□ -1.73
TRIOBP-204ENST00000406386 MT1HP80294 61 aa4.2□□□□□ -1.74
TRIOBP-204ENST00000406386 MT2AP02795 61 aa4.15□□□□□ -1.74
TRIOBP-204ENST00000406386 LCE3BQ5TA77 95 aa4.15□□□□□ -1.75
TRIOBP-204ENST00000406386 KRTAP4-1Q9BYQ7 146 aa4.14□□□□□ -1.75
TRIOBP-204ENST00000406386 KRTAP12-4P60329 112 aa4.12□□□□□ -1.75
TRIOBP-204ENST00000406386 PKHD1L1Q86WI1 4243 aa4.07□□□□□ -1.76
TRIOBP-204ENST00000406386 VPS13DQ5THJ4 4388 aa4.06□□□□□ -1.76
TRIOBP-204ENST00000406386 DNAH10Q8IVF4 4471 aa4.05□□□□□ -1.76
TRIOBP-204ENST00000406386 DNAH17Q9UFH2 4485 aa4.05□□□□□ -1.76
TRIOBP-204ENST00000406386 DNAH9Q9NYC9 4486 aa4.05□□□□□ -1.76
TRIOBP-204ENST00000406386 SPRR5A0A1B0GTR4 108 aa4.05□□□□□ -1.76
TRIOBP-204ENST00000406386 MT1FP04733 61 aa4.04□□□□□ -1.76
TRIOBP-204ENST00000406386 FAT2Q9NYQ8 4349 aa4.02□□□□□ -1.77
TRIOBP-204ENST00000406386 DYNC2H1Q8NCM8 4307 aaKnown RBP3.99□□□□□ -1.77
TRIOBP-204ENST00000406386 SPRR2EP22531 72 aa3.98□□□□□ -1.77
TRIOBP-204ENST00000406386 SPRR2BP35325 72 aa3.98□□□□□ -1.77
TRIOBP-204ENST00000406386 SPRR2AP35326 72 aa3.98□□□□□ -1.77
TRIOBP-204ENST00000406386 DNAH11Q96DT5 4516 aa3.98□□□□□ -1.77
TRIOBP-204ENST00000406386 DNAH5Q8TE73 4624 aa3.97□□□□□ -1.77
TRIOBP-204ENST00000406386 LCE3DQ9BYE3 92 aa3.93□□□□□ -1.78
TRIOBP-204ENST00000406386 DNAH8Q96JB1 4490 aa3.91□□□□□ -1.78
TRIOBP-204ENST00000406386 LCE2BO14633 110 aa3.9□□□□□ -1.78
TRIOBP-204ENST00000406386 SPRR2DP22532 72 aa3.89□□□□□ -1.79
TRIOBP-204ENST00000406386 MT1GP13640 62 aa3.88□□□□□ -1.79
TRIOBP-204ENST00000406386 KRTAP19-8Q3LI54 63 aa3.88□□□□□ -1.79
TRIOBP-204ENST00000406386 LCE3EQ5T5B0 92 aa3.88□□□□□ -1.79
TRIOBP-204ENST00000406386 PLECQ15149 4684 aaKnown RBP3.84□□□□□ -1.79
TRIOBP-204ENST00000406386 PKD1P98161 4303 aa3.84□□□□□ -1.79
TRIOBP-204ENST00000406386 MT3P25713 68 aa3.82□□□□□ -1.8
TRIOBP-204ENST00000406386 STARD9Q9P2P6 4700 aa3.82□□□□□ -1.8
TRIOBP-204ENST00000406386 KRTAP19-1Q8IUB9 90 aa3.81□□□□□ -1.8
TRIOBP-204ENST00000406386 MT1XP80297 61 aa3.81□□□□□ -1.8
TRIOBP-204ENST00000406386 LRP1Q07954 4544 aaKnown RBP3.76□□□□□ -1.81
TRIOBP-204ENST00000406386 FAT1Q14517 4588 aa3.72□□□□□ -1.81
TRIOBP-204ENST00000406386 LRP1BQ9NZR2 4599 aa3.71□□□□□ -1.81
TRIOBP-204ENST00000406386 LCE2CQ5TA81 110 aa3.66□□□□□ -1.82
TRIOBP-204ENST00000406386 DYNC1H1Q14204 4646 aaKnown RBP3.65□□□□□ -1.82
TRIOBP-204ENST00000406386 SACSQ9NZJ4 4579 aa3.65□□□□□ -1.83
TRIOBP-204ENST00000406386 MT1BP07438 61 aa3.65□□□□□ -1.83
TRIOBP-204ENST00000406386 PRM1P04553 51 aa3.63□□□□□ -1.83
TRIOBP-204ENST00000406386 TNXBP22105 4242 aa3.62□□□□□ -1.83
TRIOBP-204ENST00000406386 MT1LQ93083 61 aa3.61□□□□□ -1.83
TRIOBP-204ENST00000406386 KRTAP19-3Q7Z4W3 81 aa3.6□□□□□ -1.83
TRIOBP-204ENST00000406386 KRTAP9-8Q9BYQ0 159 aa3.59□□□□□ -1.83
TRIOBP-204ENST00000406386 APOBP04114 4563 aaKnown RBP3.59□□□□□ -1.84
TRIOBP-204ENST00000406386 HSPG2P98160 4391 aa3.57□□□□□ -1.84
TRIOBP-204ENST00000406386 KRTAP4-8A0A0G2JLE6 195 aa3.56□□□□□ -1.84
TRIOBP-204ENST00000406386 KRTAP4-8Q9BYQ9 185 aa3.56□□□□□ -1.84
TRIOBP-204ENST00000406386 LCE2DQ5TA82 110 aaPredicted RBP3.55□□□□□ -1.84
TRIOBP-204ENST00000406386 DNHD1Q96M86 4753 aa3.54□□□□□ -1.84
TRIOBP-204ENST00000406386 KRTAP9-3Q9BYQ3 159 aa3.53□□□□□ -1.84
TRIOBP-204ENST00000406386 KRTAP17-1Q9BYP8 105 aa3.49□□□□□ -1.85
TRIOBP-204ENST00000406386 MYCBP2O75592 4640 aa3.47□□□□□ -1.85
TRIOBP-204ENST00000406386 MT1EP04732 61 aa3.46□□□□□ -1.85
TRIOBP-204ENST00000406386 RYR3Q15413 4870 aa3.45□□□□□ -1.86
TRIOBP-204ENST00000406386 LCE1DQ5T752 114 aa3.45□□□□□ -1.86
TRIOBP-204ENST00000406386 RYR1P21817 5038 aa3.45□□□□□ -1.86
TRIOBP-204ENST00000406386 FAT3Q8TDW7 4589 aa3.44□□□□□ -1.86
TRIOBP-204ENST00000406386 LCE1BQ5T7P3 118 aa3.44□□□□□ -1.86
TRIOBP-204ENST00000406386 MT4P47944 62 aa3.43□□□□□ -1.86
TRIOBP-204ENST00000406386 KRTAP4-7Q9BYR0 210 aa3.42□□□□□ -1.86
TRIOBP-204ENST00000406386 MT1MQ8N339 61 aa3.41□□□□□ -1.86
TRIOBP-204ENST00000406386 LOC100996750A0A140TA64 210 aa3.29□□□□□ -1.88
TRIOBP-204ENST00000406386 KRTAP2-3P0C7H8 128 aa3.28□□□□□ -1.88
TRIOBP-204ENST00000406386 KRTAP2-4Q9BYR9 128 aa3.28□□□□□ -1.88
TRIOBP-204ENST00000406386 KRTAP2-1Q9BYU5 128 aa3.28□□□□□ -1.88
TRIOBP-204ENST00000406386 PCLOQ9Y6V0 5065 aa3.27□□□□□ -1.89
TRIOBP-204ENST00000406386 MUC17Q685J3 4493 aa3.25□□□□□ -1.89
TRIOBP-204ENST00000406386 MT1AP04731 61 aa3.22□□□□□ -1.89
TRIOBP-204ENST00000406386 LRP2P98164 4655 aa3.2□□□□□ -1.9
TRIOBP-204ENST00000406386 KRTAP19-6Q3LI70 58 aa3.2□□□□□ -1.9
TRIOBP-204ENST00000406386 KRTAP19-2Q3LHN2 52 aa3.2□□□□□ -1.9
TRIOBP-204ENST00000406386 KRTAP4-3Q9BYR4 195 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 110.4 ms