RNA–Protein interactions for RNA: ENST00000405807.8

COL4A3BP-204, Transcript of collagen type IV alpha 3 binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A3BP, Length 2,843 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-204ENST00000405807 J3QL48 77 aa8.47□□□□□ -1.05
COL4A3BP-204ENST00000405807 SMR3BP02814 79 aaPredicted RBP8.4□□□□□ -1.06
COL4A3BP-204ENST00000405807 A0A0D9SG42 100 aa8.38□□□□□ -1.07
COL4A3BP-204ENST00000405807 PKHD1L1Q86WI1 4243 aa8.34□□□□□ -1.07
COL4A3BP-204ENST00000405807 PKHD1P08F94 4074 aa8.31□□□□□ -1.08
COL4A3BP-204ENST00000405807 KRTAP10-6P60371 365 aaPredicted RBP8.28□□□□□ -1.08
COL4A3BP-204ENST00000405807 KRTAP10-4P60372 401 aaPredicted RBP8.27□□□□□ -1.09
COL4A3BP-204ENST00000405807 KRTAP3-3Q9BYR6 98 aa8.24□□□□□ -1.09
COL4A3BP-204ENST00000405807 APOBP04114 4563 aaKnown RBP8.24□□□□□ -1.09
COL4A3BP-204ENST00000405807 KRTAP13-4Q3LI77 160 aa8.24□□□□□ -1.09
COL4A3BP-204ENST00000405807 CAMK2N1Q7Z7J9 78 aa8.23□□□□□ -1.09
COL4A3BP-204ENST00000405807 DYNC1H1Q14204 4646 aaKnown RBP8.22□□□□□ -1.09
COL4A3BP-204ENST00000405807 PLAC4Q8WY50 150 aa8.19□□□□□ -1.1
COL4A3BP-204ENST00000405807 KRTAP3-2Q9BYR7 98 aa8.19□□□□□ -1.1
COL4A3BP-204ENST00000405807 FAT1Q14517 4588 aa8.19□□□□□ -1.1
COL4A3BP-204ENST00000405807 S4R3F8 94 aa8.18□□□□□ -1.1
COL4A3BP-204ENST00000405807 XP32Q5T750 250 aa8.15□□□□□ -1.1
COL4A3BP-204ENST00000405807 A0A1B0GVY2 172 aa8.13□□□□□ -1.11
COL4A3BP-204ENST00000405807 KRTAP12-2P59991 146 aa8.08□□□□□ -1.12
COL4A3BP-204ENST00000405807 KRTAP10-8P60410 259 aa8.06□□□□□ -1.12
COL4A3BP-204ENST00000405807 FAT3Q8TDW7 4589 aa8.05□□□□□ -1.12
COL4A3BP-204ENST00000405807 KMT2CQ8NEZ4 4911 aaKnown RBP7.98□□□□□ -1.13
COL4A3BP-204ENST00000405807 MYCBP2O75592 4640 aa7.97□□□□□ -1.13
COL4A3BP-204ENST00000405807 LRP1Q07954 4544 aaKnown RBP7.97□□□□□ -1.13
COL4A3BP-204ENST00000405807 HSPG2P98160 4391 aa7.95□□□□□ -1.14
COL4A3BP-204ENST00000405807 TNXBP22105 4242 aa7.95□□□□□ -1.14
COL4A3BP-204ENST00000405807 KRTAP12-1P59990 96 aa7.93□□□□□ -1.14
COL4A3BP-204ENST00000405807 PRO2289Q9P1D8 64 aa7.89□□□□□ -1.15
COL4A3BP-204ENST00000405807 M0QZ58 72 aa7.87□□□□□ -1.15
COL4A3BP-204ENST00000405807 Q5VSD8 79 aa7.82□□□□□ -1.16
COL4A3BP-204ENST00000405807 RYR2Q92736 4967 aa7.77□□□□□ -1.17
COL4A3BP-204ENST00000405807 R4GN34 69 aa7.7□□□□□ -1.18
COL4A3BP-204ENST00000405807 MT1HL1P0DM35 61 aa7.64□□□□□ -1.19
COL4A3BP-204ENST00000405807 LPAP08519 4548 aa7.64□□□□□ -1.19
COL4A3BP-204ENST00000405807 RYR3Q15413 4870 aa7.63□□□□□ -1.19
COL4A3BP-204ENST00000405807 KIAA1109Q2LD37 5005 aa7.57□□□□□ -1.2
COL4A3BP-204ENST00000405807 RYR1P21817 5038 aa7.56□□□□□ -1.2
COL4A3BP-204ENST00000405807 LRP2P98164 4655 aa7.53□□□□□ -1.2
COL4A3BP-204ENST00000405807 KRTAP17-1Q9BYP8 105 aa7.53□□□□□ -1.2
COL4A3BP-204ENST00000405807 ABCA13Q86UQ4 5058 aa7.44□□□□□ -1.22
COL4A3BP-204ENST00000405807 INE1O15225 51 aa7.44□□□□□ -1.22
COL4A3BP-204ENST00000405807 EPPK1P58107 5090 aaKnown RBP7.43□□□□□ -1.22
COL4A3BP-204ENST00000405807 PP632Q6XCG6 107 aa7.4□□□□□ -1.22
COL4A3BP-204ENST00000405807 MUC2Q02817 5179 aa7.39□□□□□ -1.23
COL4A3BP-204ENST00000405807 LORP23490 312 aaPredicted RBP7.38□□□□□ -1.23
COL4A3BP-204ENST00000405807 SPRR5A0A1B0GTR4 108 aa7.34□□□□□ -1.23
COL4A3BP-204ENST00000405807 MUC17Q685J3 4493 aa7.22□□□□□ -1.25
COL4A3BP-204ENST00000405807 KRTAP4-1Q9BYQ7 146 aa7.18□□□□□ -1.26
COL4A3BP-204ENST00000405807 KRTAP19-2Q3LHN2 52 aa7.1□□□□□ -1.27
COL4A3BP-204ENST00000405807 KRTAP4-5Q9BYR2 181 aa7.06□□□□□ -1.28
COL4A3BP-204ENST00000405807 TNP1P09430 55 aa7.03□□□□□ -1.28
COL4A3BP-204ENST00000405807 KRTAP23-1A1A580 65 aa7.02□□□□□ -1.29
COL4A3BP-204ENST00000405807 FAT4Q6V0I7 4981 aa6.94□□□□□ -1.3
COL4A3BP-204ENST00000405807 HERC1Q15751 4861 aa6.93□□□□□ -1.3
COL4A3BP-204ENST00000405807 RNF213Q63HN8 5207 aa6.92□□□□□ -1.3
COL4A3BP-204ENST00000405807 FLGP20930 4061 aaPredicted RBP6.89□□□□□ -1.31
COL4A3BP-204ENST00000405807 HERC2O95714 4834 aa6.87□□□□□ -1.31
COL4A3BP-204ENST00000405807 PCLOQ9Y6V0 5065 aa6.76□□□□□ -1.33
COL4A3BP-204ENST00000405807 BIRC6Q9NR09 4857 aa6.68□□□□□ -1.34
COL4A3BP-204ENST00000405807 SPRR2GQ9BYE4 73 aa6.68□□□□□ -1.34
COL4A3BP-204ENST00000405807 UBR4Q5T4S7 5183 aa6.67□□□□□ -1.34
COL4A3BP-204ENST00000405807 KRTAP19-1Q8IUB9 90 aa6.6□□□□□ -1.35
COL4A3BP-204ENST00000405807 HMCN2Q8NDA2 5059 aa6.57□□□□□ -1.36
COL4A3BP-204ENST00000405807 LCE3AQ5TA76 89 aa6.57□□□□□ -1.36
COL4A3BP-204ENST00000405807 LCE2CQ5TA81 110 aa6.55□□□□□ -1.36
COL4A3BP-204ENST00000405807 M0R2T5 61 aa6.48□□□□□ -1.37
COL4A3BP-204ENST00000405807 KRTAP8-1Q8IUC2 63 aa6.43□□□□□ -1.38
COL4A3BP-204ENST00000405807 KRTAP10-10P60014 251 aa6.39□□□□□ -1.39
COL4A3BP-204ENST00000405807 MT1HP80294 61 aa6.36□□□□□ -1.39
COL4A3BP-204ENST00000405807 MT1FP04733 61 aa6.35□□□□□ -1.39
COL4A3BP-204ENST00000405807 MT2AP02795 61 aa6.35□□□□□ -1.39
COL4A3BP-204ENST00000405807 KRTAP19-8Q3LI54 63 aa6.32□□□□□ -1.4
COL4A3BP-204ENST00000405807 USH2AO75445 5202 aa6.28□□□□□ -1.4
COL4A3BP-204ENST00000405807 KRTAP12-3P60328 96 aa6.27□□□□□ -1.41
COL4A3BP-204ENST00000405807 KRTAP9-8Q9BYQ0 159 aa6.27□□□□□ -1.41
COL4A3BP-204ENST00000405807 KRTAP10-5P60370 271 aa6.26□□□□□ -1.41
COL4A3BP-204ENST00000405807 MT1XP80297 61 aa6.24□□□□□ -1.41
COL4A3BP-204ENST00000405807 KRTAP10-12P60413 245 aa6.23□□□□□ -1.41
COL4A3BP-204ENST00000405807 MT1BP07438 61 aa6.21□□□□□ -1.42
COL4A3BP-204ENST00000405807 FSIP2Q5CZC0 6907 aa6.12□□□□□ -1.43
COL4A3BP-204ENST00000405807 KMT2DO14686 5537 aa6.1□□□□□ -1.43
COL4A3BP-204ENST00000405807 KRTAP10-7P60409 375 aaPredicted RBP6.09□□□□□ -1.43
COL4A3BP-204ENST00000405807 KRTAP9-3Q9BYQ3 159 aa5.99□□□□□ -1.45
COL4A3BP-204ENST00000405807 LCE3CQ5T5A8 94 aa5.92□□□□□ -1.46
COL4A3BP-204ENST00000405807 KRTAP19-5Q3LI72 72 aa5.89□□□□□ -1.47
COL4A3BP-204ENST00000405807 KRTAP2-3P0C7H8 128 aa5.71□□□□□ -1.49
COL4A3BP-204ENST00000405807 KRTAP2-4Q9BYR9 128 aa5.71□□□□□ -1.49
COL4A3BP-204ENST00000405807 KRTAP2-1Q9BYU5 128 aa5.71□□□□□ -1.49
COL4A3BP-204ENST00000405807 LCE2BO14633 110 aa5.7□□□□□ -1.5
COL4A3BP-204ENST00000405807 KRTAP9-6A8MVA2 160 aa5.68□□□□□ -1.5
COL4A3BP-204ENST00000405807 KRTAP4-8A0A0G2JLE6 195 aa5.63□□□□□ -1.51
COL4A3BP-204ENST00000405807 KRTAP4-8Q9BYQ9 185 aa5.63□□□□□ -1.51
COL4A3BP-204ENST00000405807 KRTAP19-4Q3LI73 84 aa5.57□□□□□ -1.52
COL4A3BP-204ENST00000405807 KRTAP19-7Q3SYF9 63 aa5.55□□□□□ -1.52
COL4A3BP-204ENST00000405807 KRTAP4-7Q9BYR0 210 aa5.51□□□□□ -1.53
COL4A3BP-204ENST00000405807 DSTQ03001 7570 aaKnown RBP5.49□□□□□ -1.53
COL4A3BP-204ENST00000405807 KRTAP2-2Q9BYT5 123 aa5.46□□□□□ -1.54
COL4A3BP-204ENST00000405807 MT1LQ93083 61 aa5.42□□□□□ -1.54
COL4A3BP-204ENST00000405807 KRTAP12-4P60329 112 aa5.42□□□□□ -1.54
COL4A3BP-204ENST00000405807 LCE2DQ5TA82 110 aaPredicted RBP5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms