RNA–Protein interactions for RNA: ENST00000403073.1

PTCHD3P3-201, Transcript of patched domain containing 3 pseudogene 3, humanhuman

BASIC

Gene PTCHD3P3, Length 906 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P3-201ENST00000403073 KRTAP9-3Q9BYQ3 159 aa8.06□□□□□ -1.12
PTCHD3P3-201ENST00000403073 SNURFQ9Y675 71 aa8.04□□□□□ -1.12
PTCHD3P3-201ENST00000403073 FSIP2Q5CZC0 6907 aa8.01□□□□□ -1.13
PTCHD3P3-201ENST00000403073 NDUFC1O43677 76 aa8□□□□□ -1.13
PTCHD3P3-201ENST00000403073 C20orf197Q8N268 126 aa8□□□□□ -1.13
PTCHD3P3-201ENST00000403073 DMAC1Q96GE9 116 aa7.99□□□□□ -1.13
PTCHD3P3-201ENST00000403073 LCE2BO14633 110 aa7.95□□□□□ -1.14
PTCHD3P3-201ENST00000403073 CRCT1Q9UGL9 99 aa7.92□□□□□ -1.14
PTCHD3P3-201ENST00000403073 COX7CP15954 63 aa7.91□□□□□ -1.14
PTCHD3P3-201ENST00000403073 USH2AO75445 5202 aa7.89□□□□□ -1.15
PTCHD3P3-201ENST00000403073 ACYP2P14621 99 aa7.88□□□□□ -1.15
PTCHD3P3-201ENST00000403073 SPANXA2-OT1Q8N9U9 137 aa7.83□□□□□ -1.16
PTCHD3P3-201ENST00000403073 ANAPC13Q9BS18 74 aa7.81□□□□□ -1.16
PTCHD3P3-201ENST00000403073 H0YAA0 97 aa7.8□□□□□ -1.16
PTCHD3P3-201ENST00000403073 KRTAP19-1Q8IUB9 90 aa7.79□□□□□ -1.16
PTCHD3P3-201ENST00000403073 ADM2Q7Z4H4 148 aa7.78□□□□□ -1.16
PTCHD3P3-201ENST00000403073 CYSTM1Q9H1C7 97 aa7.77□□□□□ -1.17
PTCHD3P3-201ENST00000403073 SSPOA2VEC9 5147 aa7.74□□□□□ -1.17
PTCHD3P3-201ENST00000403073 CHKB-CPT1BH3BT56 60 aa7.74□□□□□ -1.17
PTCHD3P3-201ENST00000403073 SPRR2GQ9BYE4 73 aa7.73□□□□□ -1.17
PTCHD3P3-201ENST00000403073 H7BZZ5 65 aa7.71□□□□□ -1.18
PTCHD3P3-201ENST00000403073 CRIPTQ9P021 101 aa7.71□□□□□ -1.18
PTCHD3P3-201ENST00000403073 SPTSSBQ8NFR3 76 aa7.7□□□□□ -1.18
PTCHD3P3-201ENST00000403073 CCDC179H3BU77 68 aa7.67□□□□□ -1.18
PTCHD3P3-201ENST00000403073 P0C880 135 aa7.66□□□□□ -1.18
PTCHD3P3-201ENST00000403073 KRTAP3-2Q9BYR7 98 aa7.66□□□□□ -1.18
PTCHD3P3-201ENST00000403073 KRTAP19-8Q3LI54 63 aa7.63□□□□□ -1.19
PTCHD3P3-201ENST00000403073 COA5Q86WW8 74 aa7.62□□□□□ -1.19
PTCHD3P3-201ENST00000403073 MT1BP07438 61 aa7.6□□□□□ -1.19
PTCHD3P3-201ENST00000403073 Q5VV11 94 aa7.6□□□□□ -1.19
PTCHD3P3-201ENST00000403073 KRTAP19-6Q3LI70 58 aa7.59□□□□□ -1.19
PTCHD3P3-201ENST00000403073 R4GN34 69 aa7.53□□□□□ -1.2
PTCHD3P3-201ENST00000403073 M0QZ58 72 aa7.51□□□□□ -1.21
PTCHD3P3-201ENST00000403073 FCGBPQ9Y6R7 5405 aaPredicted RBP7.5□□□□□ -1.21
PTCHD3P3-201ENST00000403073 LINC01554Q52M75 96 aa7.4□□□□□ -1.22
PTCHD3P3-201ENST00000403073 ATP5EP56381 51 aaPredicted RBP7.39□□□□□ -1.23
PTCHD3P3-201ENST00000403073 A6NN06 94 aa7.37□□□□□ -1.23
PTCHD3P3-201ENST00000403073 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.36□□□□□ -1.23
PTCHD3P3-201ENST00000403073 SEC61GP60059 68 aa7.35□□□□□ -1.23
PTCHD3P3-201ENST00000403073 PLAC4Q8WY50 150 aa7.35□□□□□ -1.23
PTCHD3P3-201ENST00000403073 KRTAP10-5P60370 271 aa7.34□□□□□ -1.23
PTCHD3P3-201ENST00000403073 TMEM258P61165 79 aa7.34□□□□□ -1.23
PTCHD3P3-201ENST00000403073 SERP1Q9Y6X1 66 aa7.33□□□□□ -1.24
PTCHD3P3-201ENST00000403073 KRTAP13-4Q3LI77 160 aa7.29□□□□□ -1.24
PTCHD3P3-201ENST00000403073 MACF1Q9UPN3 7388 aaKnown RBP7.26□□□□□ -1.25
PTCHD3P3-201ENST00000403073 A0A1B0GU69 56 aa7.23□□□□□ -1.25
PTCHD3P3-201ENST00000403073 A0A1B0GU33 70 aa7.21□□□□□ -1.26
PTCHD3P3-201ENST00000403073 KRTAP9-7A8MTY7 169 aa7.21□□□□□ -1.26
PTCHD3P3-201ENST00000403073 MT1XP80297 61 aa7.21□□□□□ -1.26
PTCHD3P3-201ENST00000403073 SPATA8Q6RVD6 105 aa7.17□□□□□ -1.26
PTCHD3P3-201ENST00000403073 PRO2289Q9P1D8 64 aa7.17□□□□□ -1.26
PTCHD3P3-201ENST00000403073 SYNE2Q8WXH0 6885 aaKnown RBP7.15□□□□□ -1.27
PTCHD3P3-201ENST00000403073 LINC01558Q9Y6Z2 57 aa7.12□□□□□ -1.27
PTCHD3P3-201ENST00000403073 A0A0D9SG42 100 aa7.11□□□□□ -1.27
PTCHD3P3-201ENST00000403073 PCP4P48539 62 aa7.11□□□□□ -1.27
PTCHD3P3-201ENST00000403073 PRR15LQ9BU68 103 aa7.08□□□□□ -1.28
PTCHD3P3-201ENST00000403073 SPINT4Q6UDR6 99 aa6.99□□□□□ -1.29
PTCHD3P3-201ENST00000403073 CAMK2N1Q7Z7J9 78 aa6.99□□□□□ -1.29
PTCHD3P3-201ENST00000403073 SMIM26A0A096LP01 95 aa6.98□□□□□ -1.29
PTCHD3P3-201ENST00000403073 A8MU10 97 aa6.98□□□□□ -1.29
PTCHD3P3-201ENST00000403073 KRTAP6-3Q3LI67 103 aa6.98□□□□□ -1.29
PTCHD3P3-201ENST00000403073 KRTAP12-1P59990 96 aa6.96□□□□□ -1.3
PTCHD3P3-201ENST00000403073 KRTAP12-2P59991 146 aa6.93□□□□□ -1.3
PTCHD3P3-201ENST00000403073 KRTAP10-7P60409 375 aaPredicted RBP6.9□□□□□ -1.3
PTCHD3P3-201ENST00000403073 V9GYY9 64 aa6.88□□□□□ -1.31
PTCHD3P3-201ENST00000403073 UQCR11O14957 56 aa6.87□□□□□ -1.31
PTCHD3P3-201ENST00000403073 Q1T7F1 81 aa6.87□□□□□ -1.31
PTCHD3P3-201ENST00000403073 PSPHP1O15172 72 aa6.84□□□□□ -1.31
PTCHD3P3-201ENST00000403073 KRTAP10-12P60413 245 aa6.84□□□□□ -1.31
PTCHD3P3-201ENST00000403073 KRTAP4-8A0A0G2JLE6 195 aa6.82□□□□□ -1.32
PTCHD3P3-201ENST00000403073 RPS28P62857 69 aaKnown RBP6.82□□□□□ -1.32
PTCHD3P3-201ENST00000403073 KRTAP4-8Q9BYQ9 185 aa6.82□□□□□ -1.32
PTCHD3P3-201ENST00000403073 KMT2DO14686 5537 aa6.81□□□□□ -1.32
PTCHD3P3-201ENST00000403073 KRTAP5-9P26371 169 aa6.79□□□□□ -1.32
PTCHD3P3-201ENST00000403073 KRTAP8-1Q8IUC2 63 aa6.78□□□□□ -1.32
PTCHD3P3-201ENST00000403073 MIR22HGQ0VDD5 57 aa6.76□□□□□ -1.33
PTCHD3P3-201ENST00000403073 SPRR2FQ96RM1 72 aa6.7□□□□□ -1.34
PTCHD3P3-201ENST00000403073 NEBP20929 6669 aa6.67□□□□□ -1.34
PTCHD3P3-201ENST00000403073 C10orf95Q9H7T3 257 aa6.65□□□□□ -1.34
PTCHD3P3-201ENST00000403073 MUC12Q9UKN1 5478 aa6.65□□□□□ -1.35
PTCHD3P3-201ENST00000403073 A6NED7 52 aa6.61□□□□□ -1.35
PTCHD3P3-201ENST00000403073 K7ERS5 55 aa6.54□□□□□ -1.36
PTCHD3P3-201ENST00000403073 MDN1Q9NU22 5596 aa6.53□□□□□ -1.36
PTCHD3P3-201ENST00000403073 TNP1P09430 55 aa6.52□□□□□ -1.37
PTCHD3P3-201ENST00000403073 SPRR2EP22531 72 aa6.52□□□□□ -1.37
PTCHD3P3-201ENST00000403073 SPRR2BP35325 72 aa6.52□□□□□ -1.37
PTCHD3P3-201ENST00000403073 SPRR2AP35326 72 aa6.52□□□□□ -1.37
PTCHD3P3-201ENST00000403073 LCE1AQ5T7P2 110 aa6.48□□□□□ -1.37
PTCHD3P3-201ENST00000403073 KRTAP19-7Q3SYF9 63 aa6.44□□□□□ -1.38
PTCHD3P3-201ENST00000403073 LCE3AQ5TA76 89 aa6.4□□□□□ -1.38
PTCHD3P3-201ENST00000403073 KRTAP19-5Q3LI72 72 aa6.39□□□□□ -1.39
PTCHD3P3-201ENST00000403073 CDC42SE1Q9NRR8 79 aa6.37□□□□□ -1.39
PTCHD3P3-201ENST00000403073 MT1EP04732 61 aa6.36□□□□□ -1.39
PTCHD3P3-201ENST00000403073 KRTAP25-1Q3LHN0 102 aa6.31□□□□□ -1.4
PTCHD3P3-201ENST00000403073 KRTAP20-1Q3LI63 56 aa6.31□□□□□ -1.4
PTCHD3P3-201ENST00000403073 SPRR2DP22532 72 aa6.3□□□□□ -1.4
PTCHD3P3-201ENST00000403073 KRTAP2-3P0C7H8 128 aa6.24□□□□□ -1.41
PTCHD3P3-201ENST00000403073 KRTAP2-4Q9BYR9 128 aa6.24□□□□□ -1.41
PTCHD3P3-201ENST00000403073 KRTAP19-3Q7Z4W3 81 aa6.23□□□□□ -1.41
PTCHD3P3-201ENST00000403073 LCE5AQ5TCM9 118 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms