RNA–Protein interactions for RNA: ENST00000402989.5

SMC6-203, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMC6, Length 3,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-203ENST00000402989 MIR22HGQ0VDD5 57 aa2.37□□□□□ -2.03
SMC6-203ENST00000402989 KTN1-AS1Q86SY8 53 aa2.36□□□□□ -2.03
SMC6-203ENST00000402989 A6NN06 94 aa2.35□□□□□ -2.03
SMC6-203ENST00000402989 UQCR11O14957 56 aa2.35□□□□□ -2.03
SMC6-203ENST00000402989 ADM2Q7Z4H4 148 aa2.35□□□□□ -2.03
SMC6-203ENST00000402989 Q5VSD8 79 aa2.35□□□□□ -2.03
SMC6-203ENST00000402989 MUC17Q685J3 4493 aa2.35□□□□□ -2.03
SMC6-203ENST00000402989 KRTAP10-4P60372 401 aaPredicted RBP2.34□□□□□ -2.03
SMC6-203ENST00000402989 SEC61BP60468 96 aaKnown RBP2.34□□□□□ -2.03
SMC6-203ENST00000402989 KRTAP9-2Q9BYQ4 174 aa2.34□□□□□ -2.03
SMC6-203ENST00000402989 A8MUU9 505 aa2.33□□□□□ -2.04
SMC6-203ENST00000402989 KIAA1109Q2LD37 5005 aa2.32□□□□□ -2.04
SMC6-203ENST00000402989 C20orf166-AS1Q96NR2 134 aa2.32□□□□□ -2.04
SMC6-203ENST00000402989 RPS29P62273 56 aaKnown RBP2.32□□□□□ -2.04
SMC6-203ENST00000402989 SPATA8Q6RVD6 105 aa2.32□□□□□ -2.04
SMC6-203ENST00000402989 KRTAP3-1Q9BYR8 98 aa2.32□□□□□ -2.04
SMC6-203ENST00000402989 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.3□□□□□ -2.04
SMC6-203ENST00000402989 KRTAP9-6A0A140TA67 174 aa2.3□□□□□ -2.04
SMC6-203ENST00000402989 KRTAP4-8A0A0G2JLE6 195 aa2.29□□□□□ -2.04
SMC6-203ENST00000402989 A0A0D9SG42 100 aa2.29□□□□□ -2.04
SMC6-203ENST00000402989 A0A1B0GU33 70 aa2.29□□□□□ -2.04
SMC6-203ENST00000402989 CRIPTQ9P021 101 aa2.29□□□□□ -2.04
SMC6-203ENST00000402989 H0YAA0 97 aa2.28□□□□□ -2.04
SMC6-203ENST00000402989 COX6B2Q6YFQ2 88 aa2.28□□□□□ -2.04
SMC6-203ENST00000402989 RYR1P21817 5038 aa2.28□□□□□ -2.05
SMC6-203ENST00000402989 KRTAP10-8P60410 259 aa2.27□□□□□ -2.05
SMC6-203ENST00000402989 CSAG1Q6PB30 78 aa2.27□□□□□ -2.05
SMC6-203ENST00000402989 H1FX-AS1Q4G0G2 97 aa2.26□□□□□ -2.05
SMC6-203ENST00000402989 KRTAP4-7Q9BYR0 210 aa2.26□□□□□ -2.05
SMC6-203ENST00000402989 RPL37P61927 97 aaKnown RBP2.25□□□□□ -2.05
SMC6-203ENST00000402989 LINC01554Q52M75 96 aa2.25□□□□□ -2.05
SMC6-203ENST00000402989 HERC2O95714 4834 aa2.25□□□□□ -2.05
SMC6-203ENST00000402989 LRP2P98164 4655 aa2.25□□□□□ -2.05
SMC6-203ENST00000402989 EPPK1P58107 5090 aaKnown RBP2.24□□□□□ -2.05
SMC6-203ENST00000402989 BIRC6Q9NR09 4857 aa2.24□□□□□ -2.05
SMC6-203ENST00000402989 S4R3F8 94 aa2.24□□□□□ -2.05
SMC6-203ENST00000402989 LPAP08519 4548 aa2.23□□□□□ -2.05
SMC6-203ENST00000402989 KRTAP9-9Q9BYP9 154 aa2.23□□□□□ -2.05
SMC6-203ENST00000402989 KRTAP9-4Q9BYQ2 154 aa2.23□□□□□ -2.05
SMC6-203ENST00000402989 K7ERS5 55 aa2.22□□□□□ -2.05
SMC6-203ENST00000402989 MT1HL1P0DM35 61 aa2.22□□□□□ -2.05
SMC6-203ENST00000402989 KRTAP4-5Q9BYR2 181 aa2.22□□□□□ -2.05
SMC6-203ENST00000402989 P0C880 135 aa2.21□□□□□ -2.05
SMC6-203ENST00000402989 KRTAP9-8Q9BYQ0 159 aa2.21□□□□□ -2.05
SMC6-203ENST00000402989 ABCA13Q86UQ4 5058 aa2.21□□□□□ -2.06
SMC6-203ENST00000402989 LCE3BQ5TA77 95 aa2.21□□□□□ -2.06
SMC6-203ENST00000402989 KRTAP5-3Q6L8H2 238 aa2.21□□□□□ -2.06
SMC6-203ENST00000402989 KRTAP19-1Q8IUB9 90 aa2.21□□□□□ -2.06
SMC6-203ENST00000402989 KRTAP4-9Q9BYQ8 210 aa2.21□□□□□ -2.06
SMC6-203ENST00000402989 KRTAP13-4Q3LI77 160 aa2.2□□□□□ -2.06
SMC6-203ENST00000402989 LCE1DQ5T752 114 aa2.2□□□□□ -2.06
SMC6-203ENST00000402989 SPINT4Q6UDR6 99 aa2.2□□□□□ -2.06
SMC6-203ENST00000402989 FLGP20930 4061 aaPredicted RBP2.2□□□□□ -2.06
SMC6-203ENST00000402989 KRTAP10-6P60371 365 aaPredicted RBP2.18□□□□□ -2.06
SMC6-203ENST00000402989 KRTAP19-4Q3LI73 84 aa2.18□□□□□ -2.06
SMC6-203ENST00000402989 LUZP6Q538Z0 58 aa2.18□□□□□ -2.06
SMC6-203ENST00000402989 C10orf95Q9H7T3 257 aa2.16□□□□□ -2.06
SMC6-203ENST00000402989 KRTAP25-1Q3LHN0 102 aa2.15□□□□□ -2.07
SMC6-203ENST00000402989 ROMO1P60602 79 aa2.14□□□□□ -2.07
SMC6-203ENST00000402989 TPRXLQ17RH7 258 aa2.14□□□□□ -2.07
SMC6-203ENST00000402989 KRTAP12-2P59991 146 aa2.14□□□□□ -2.07
SMC6-203ENST00000402989 M0QZ58 72 aa2.13□□□□□ -2.07
SMC6-203ENST00000402989 MUC2Q02817 5179 aa2.12□□□□□ -2.07
SMC6-203ENST00000402989 R4GN34 69 aa2.11□□□□□ -2.07
SMC6-203ENST00000402989 KRTAP4-2Q9BYR5 136 aa2.11□□□□□ -2.07
SMC6-203ENST00000402989 KRTAP4-1Q9BYQ7 146 aa2.1□□□□□ -2.07
SMC6-203ENST00000402989 KRTAP12-1P59990 96 aa2.09□□□□□ -2.07
SMC6-203ENST00000402989 KRTAP23-1A1A580 65 aa2.08□□□□□ -2.08
SMC6-203ENST00000402989 HERC1Q15751 4861 aa2.08□□□□□ -2.08
SMC6-203ENST00000402989 NDUFAF8A1L188 74 aa2.06□□□□□ -2.08
SMC6-203ENST00000402989 KRTAP4-11Q9BYQ6 195 aa2.05□□□□□ -2.08
SMC6-203ENST00000402989 HMCN2Q8NDA2 5059 aa2.05□□□□□ -2.08
SMC6-203ENST00000402989 PCLOQ9Y6V0 5065 aa2.05□□□□□ -2.08
SMC6-203ENST00000402989 CAMK2N1Q7Z7J9 78 aa2.03□□□□□ -2.08
SMC6-203ENST00000402989 HMCN1Q96RW7 5635 aa2.02□□□□□ -2.09
SMC6-203ENST00000402989 FAT4Q6V0I7 4981 aa2.02□□□□□ -2.09
SMC6-203ENST00000402989 M0R2T5 61 aa2.02□□□□□ -2.09
SMC6-203ENST00000402989 RNF213Q63HN8 5207 aa2.01□□□□□ -2.09
SMC6-203ENST00000402989 KRTAP19-2Q3LHN2 52 aa2□□□□□ -2.09
SMC6-203ENST00000402989 FSIP2Q5CZC0 6907 aa2□□□□□ -2.09
SMC6-203ENST00000402989 LCE5AQ5TCM9 118 aa1.97□□□□□ -2.09
SMC6-203ENST00000402989 UBR4Q5T4S7 5183 aa1.97□□□□□ -2.09
SMC6-203ENST00000402989 LCE4AQ5TA78 99 aa1.95□□□□□ -2.1
SMC6-203ENST00000402989 KRTAP15-1Q3LI76 137 aa1.93□□□□□ -2.1
SMC6-203ENST00000402989 PLAC4Q8WY50 150 aa1.91□□□□□ -2.1
SMC6-203ENST00000402989 KRTAP10-10P60014 251 aa1.91□□□□□ -2.1
SMC6-203ENST00000402989 TNP1P09430 55 aa1.89□□□□□ -2.11
SMC6-203ENST00000402989 KRTAP9-3Q9BYQ3 159 aa1.88□□□□□ -2.11
SMC6-203ENST00000402989 MT1HP80294 61 aa1.87□□□□□ -2.11
SMC6-203ENST00000402989 KRTAP9-7A8MTY7 169 aa1.86□□□□□ -2.11
SMC6-203ENST00000402989 MT1FP04733 61 aa1.86□□□□□ -2.11
SMC6-203ENST00000402989 MT2AP02795 61 aa1.84□□□□□ -2.11
SMC6-203ENST00000402989 PP632Q6XCG6 107 aa1.84□□□□□ -2.12
SMC6-203ENST00000402989 OBSCNQ5VST9 7968 aa1.82□□□□□ -2.12
SMC6-203ENST00000402989 SPRR2GQ9BYE4 73 aa1.81□□□□□ -2.12
SMC6-203ENST00000402989 LCE3AQ5TA76 89 aa1.81□□□□□ -2.12
SMC6-203ENST00000402989 MUC5BQ9HC84 5762 aaPredicted RBP1.79□□□□□ -2.12
SMC6-203ENST00000402989 USH2AO75445 5202 aa1.79□□□□□ -2.12
SMC6-203ENST00000402989 MT1BP07438 61 aa1.76□□□□□ -2.13
SMC6-203ENST00000402989 KMT2DO14686 5537 aa1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms