RNA–Protein interactions for RNA: ENST00000402550.5

CGREF1-204, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 2 BASIC

Gene CGREF1, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-204ENST00000402550 ACYP2P14621 99 aa13.06□□□□□ -0.32
CGREF1-204ENST00000402550 LCA10Q71F78 164 aa13.03□□□□□ -0.32
CGREF1-204ENST00000402550 PCP4P48539 62 aa12.92□□□□□ -0.34
CGREF1-204ENST00000402550 CSAG1Q6PB30 78 aa12.92□□□□□ -0.34
CGREF1-204ENST00000402550 KRTAP9-8Q9BYQ0 159 aa12.87□□□□□ -0.35
CGREF1-204ENST00000402550 CHKB-CPT1BH3BT56 60 aa12.86□□□□□ -0.35
CGREF1-204ENST00000402550 KRTAP3-3Q9BYR6 98 aa12.86□□□□□ -0.35
CGREF1-204ENST00000402550 ATP5EP56381 51 aaPredicted RBP12.84□□□□□ -0.35
CGREF1-204ENST00000402550 TMEM258P61165 79 aa12.83□□□□□ -0.36
CGREF1-204ENST00000402550 COA5Q86WW8 74 aa12.76□□□□□ -0.37
CGREF1-204ENST00000402550 SPTSSBQ8NFR3 76 aa12.76□□□□□ -0.37
CGREF1-204ENST00000402550 MT2AP02795 61 aa12.73□□□□□ -0.37
CGREF1-204ENST00000402550 LCE2DQ5TA82 110 aaPredicted RBP12.66□□□□□ -0.38
CGREF1-204ENST00000402550 KRTAP9-2Q9BYQ4 174 aa12.65□□□□□ -0.38
CGREF1-204ENST00000402550 MT1FP04733 61 aa12.64□□□□□ -0.39
CGREF1-204ENST00000402550 KRTAP10-10P60014 251 aa12.6□□□□□ -0.39
CGREF1-204ENST00000402550 H0YAA0 97 aa12.53□□□□□ -0.4
CGREF1-204ENST00000402550 ADM2Q7Z4H4 148 aa12.44□□□□□ -0.42
CGREF1-204ENST00000402550 KRTAP9-3Q9BYQ3 159 aa12.44□□□□□ -0.42
CGREF1-204ENST00000402550 SERP1Q9Y6X1 66 aa12.42□□□□□ -0.42
CGREF1-204ENST00000402550 SEC61GP60059 68 aa12.28□□□□□ -0.44
CGREF1-204ENST00000402550 KRTAP3-2Q9BYR7 98 aa12.25□□□□□ -0.45
CGREF1-204ENST00000402550 CRIPTQ9P021 101 aa12.25□□□□□ -0.45
CGREF1-204ENST00000402550 FSIP2Q5CZC0 6907 aa12.24□□□□□ -0.45
CGREF1-204ENST00000402550 LCE2BO14633 110 aa12.24□□□□□ -0.45
CGREF1-204ENST00000402550 P0C880 135 aa12.24□□□□□ -0.45
CGREF1-204ENST00000402550 USH2AO75445 5202 aa12.15□□□□□ -0.46
CGREF1-204ENST00000402550 A0A1B0GU69 56 aa12.13□□□□□ -0.47
CGREF1-204ENST00000402550 RPS28P62857 69 aaKnown RBP12.1□□□□□ -0.47
CGREF1-204ENST00000402550 KRTAP19-1Q8IUB9 90 aa12.1□□□□□ -0.47
CGREF1-204ENST00000402550 R4GN34 69 aa12.1□□□□□ -0.47
CGREF1-204ENST00000402550 SPRR2GQ9BYE4 73 aa12.06□□□□□ -0.48
CGREF1-204ENST00000402550 CRCT1Q9UGL9 99 aa12.06□□□□□ -0.48
CGREF1-204ENST00000402550 LINC01558Q9Y6Z2 57 aa12.06□□□□□ -0.48
CGREF1-204ENST00000402550 PRR15LQ9BU68 103 aa12.05□□□□□ -0.48
CGREF1-204ENST00000402550 M0QZ58 72 aa12.02□□□□□ -0.49
CGREF1-204ENST00000402550 SMIM26A0A096LP01 95 aa12.01□□□□□ -0.49
CGREF1-204ENST00000402550 KRTAP9-6A0A140TA67 174 aa11.99□□□□□ -0.49
CGREF1-204ENST00000402550 V9GYY9 64 aa11.99□□□□□ -0.49
CGREF1-204ENST00000402550 SSPOA2VEC9 5147 aa11.92□□□□□ -0.5
CGREF1-204ENST00000402550 A0A1B0GU33 70 aa11.92□□□□□ -0.5
CGREF1-204ENST00000402550 Q1T7F1 81 aa11.9□□□□□ -0.5
CGREF1-204ENST00000402550 KRTAP19-8Q3LI54 63 aa11.85□□□□□ -0.51
CGREF1-204ENST00000402550 LINC01554Q52M75 96 aa11.82□□□□□ -0.52
CGREF1-204ENST00000402550 Q5VV11 94 aa11.8□□□□□ -0.52
CGREF1-204ENST00000402550 MT1BP07438 61 aa11.77□□□□□ -0.53
CGREF1-204ENST00000402550 KRTAP13-4Q3LI77 160 aa11.77□□□□□ -0.53
CGREF1-204ENST00000402550 PSPHP1O15172 72 aa11.74□□□□□ -0.53
CGREF1-204ENST00000402550 SPATA8Q6RVD6 105 aa11.72□□□□□ -0.53
CGREF1-204ENST00000402550 KRTAP19-6Q3LI70 58 aa11.68□□□□□ -0.54
CGREF1-204ENST00000402550 UQCR11O14957 56 aa11.65□□□□□ -0.54
CGREF1-204ENST00000402550 PLAC4Q8WY50 150 aa11.62□□□□□ -0.55
CGREF1-204ENST00000402550 A0A0D9SG42 100 aa11.58□□□□□ -0.55
CGREF1-204ENST00000402550 A6NN06 94 aa11.58□□□□□ -0.56
CGREF1-204ENST00000402550 FCGBPQ9Y6R7 5405 aaPredicted RBP11.55□□□□□ -0.56
CGREF1-204ENST00000402550 MIR22HGQ0VDD5 57 aa11.45□□□□□ -0.58
CGREF1-204ENST00000402550 A8MU10 97 aa11.45□□□□□ -0.58
CGREF1-204ENST00000402550 A6NED7 52 aa11.43□□□□□ -0.58
CGREF1-204ENST00000402550 SPINT4Q6UDR6 99 aa11.38□□□□□ -0.59
CGREF1-204ENST00000402550 KRTAP10-5P60370 271 aa11.36□□□□□ -0.59
CGREF1-204ENST00000402550 KRTAP12-1P59990 96 aa11.33□□□□□ -0.6
CGREF1-204ENST00000402550 CAMK2N1Q7Z7J9 78 aa11.28□□□□□ -0.6
CGREF1-204ENST00000402550 PRO2289Q9P1D8 64 aa11.28□□□□□ -0.6
CGREF1-204ENST00000402550 KRTAP12-2P59991 146 aa11.26□□□□□ -0.61
CGREF1-204ENST00000402550 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.2□□□□□ -0.62
CGREF1-204ENST00000402550 MT1XP80297 61 aa11.2□□□□□ -0.62
CGREF1-204ENST00000402550 K7ERS5 55 aa11.13□□□□□ -0.63
CGREF1-204ENST00000402550 CDC42SE1Q9NRR8 79 aa11.1□□□□□ -0.63
CGREF1-204ENST00000402550 MACF1Q9UPN3 7388 aaKnown RBP11.06□□□□□ -0.64
CGREF1-204ENST00000402550 KRTAP9-7A8MTY7 169 aa10.86□□□□□ -0.67
CGREF1-204ENST00000402550 SYNE2Q8WXH0 6885 aaKnown RBP10.85□□□□□ -0.67
CGREF1-204ENST00000402550 BRK1Q8WUW1 75 aa10.84□□□□□ -0.67
CGREF1-204ENST00000402550 C10orf95Q9H7T3 257 aa10.73□□□□□ -0.69
CGREF1-204ENST00000402550 KRTAP10-7P60409 375 aaPredicted RBP10.69□□□□□ -0.7
CGREF1-204ENST00000402550 KRTAP6-3Q3LI67 103 aa10.68□□□□□ -0.7
CGREF1-204ENST00000402550 KMT2DO14686 5537 aa10.64□□□□□ -0.71
CGREF1-204ENST00000402550 KRTAP10-12P60413 245 aa10.64□□□□□ -0.71
CGREF1-204ENST00000402550 TNP1P09430 55 aa10.62□□□□□ -0.71
CGREF1-204ENST00000402550 KRTAP4-8A0A0G2JLE6 195 aa10.54□□□□□ -0.72
CGREF1-204ENST00000402550 KRTAP4-8Q9BYQ9 185 aa10.54□□□□□ -0.72
CGREF1-204ENST00000402550 ROMO1P60602 79 aa10.48□□□□□ -0.73
CGREF1-204ENST00000402550 KRTAP5-9P26371 169 aa10.47□□□□□ -0.73
CGREF1-204ENST00000402550 KRTAP8-1Q8IUC2 63 aa10.47□□□□□ -0.73
CGREF1-204ENST00000402550 KRTAP25-1Q3LHN0 102 aa10.43□□□□□ -0.74
CGREF1-204ENST00000402550 SPRR2FQ96RM1 72 aa10.3□□□□□ -0.76
CGREF1-204ENST00000402550 MUC12Q9UKN1 5478 aa10.3□□□□□ -0.76
CGREF1-204ENST00000402550 PRO0628Q9UI54 55 aa10.27□□□□□ -0.76
CGREF1-204ENST00000402550 PMAIP1Q13794 54 aa10.25□□□□□ -0.77
CGREF1-204ENST00000402550 LCE3AQ5TA76 89 aa10.2□□□□□ -0.78
CGREF1-204ENST00000402550 MDN1Q9NU22 5596 aa10.12□□□□□ -0.79
CGREF1-204ENST00000402550 KRTAP23-1A1A580 65 aa10.08□□□□□ -0.8
CGREF1-204ENST00000402550 NEBP20929 6669 aa10.04□□□□□ -0.8
CGREF1-204ENST00000402550 KRTAP19-7Q3SYF9 63 aa10.01□□□□□ -0.81
CGREF1-204ENST00000402550 SPRR2EP22531 72 aa9.98□□□□□ -0.81
CGREF1-204ENST00000402550 SPRR2BP35325 72 aa9.98□□□□□ -0.81
CGREF1-204ENST00000402550 SPRR2AP35326 72 aa9.98□□□□□ -0.81
CGREF1-204ENST00000402550 KRTAP19-5Q3LI72 72 aa9.97□□□□□ -0.81
CGREF1-204ENST00000402550 PP632Q6XCG6 107 aa9.97□□□□□ -0.81
CGREF1-204ENST00000402550 LCE1AQ5T7P2 110 aa9.97□□□□□ -0.81
CGREF1-204ENST00000402550 MT1EP04732 61 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 101.4 ms