RNA–Protein interactions for RNA: ENST00000399975.7

USP16-203, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene USP16, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-203ENST00000399975 HMCN2Q8NDA2 5059 aa3.68□□□□□ -1.82
USP16-203ENST00000399975 HERC1Q15751 4861 aa3.66□□□□□ -1.82
USP16-203ENST00000399975 HRES1P13985 223 aa3.65□□□□□ -1.83
USP16-203ENST00000399975 SEC61BP60468 96 aaKnown RBP3.64□□□□□ -1.83
USP16-203ENST00000399975 A8MU10 97 aa3.64□□□□□ -1.83
USP16-203ENST00000399975 A6NED7 52 aa3.63□□□□□ -1.83
USP16-203ENST00000399975 LPAP08519 4548 aa3.63□□□□□ -1.83
USP16-203ENST00000399975 C7orf65Q6ZTY9 151 aa3.63□□□□□ -1.83
USP16-203ENST00000399975 KRTAP9-2Q9BYQ4 174 aa3.62□□□□□ -1.83
USP16-203ENST00000399975 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.61□□□□□ -1.83
USP16-203ENST00000399975 Q5W150 140 aa3.61□□□□□ -1.83
USP16-203ENST00000399975 DMAC1Q96GE9 116 aa3.61□□□□□ -1.83
USP16-203ENST00000399975 RBM12B-AS1Q9P1G2 102 aa3.6□□□□□ -1.83
USP16-203ENST00000399975 KRTAP9-6A0A140TA67 174 aa3.6□□□□□ -1.83
USP16-203ENST00000399975 ACYP2P14621 99 aa3.6□□□□□ -1.83
USP16-203ENST00000399975 PCOTHQ58A44 107 aa3.6□□□□□ -1.83
USP16-203ENST00000399975 IGKV2-30P06310 120 aa3.58□□□□□ -1.84
USP16-203ENST00000399975 LRP2P98164 4655 aa3.58□□□□□ -1.84
USP16-203ENST00000399975 SPINK7P58062 85 aa3.57□□□□□ -1.84
USP16-203ENST00000399975 SPTSSBQ8NFR3 76 aa3.57□□□□□ -1.84
USP16-203ENST00000399975 SPATA8Q6RVD6 105 aa3.56□□□□□ -1.84
USP16-203ENST00000399975 KRTAP4-1Q9BYQ7 146 aa3.54□□□□□ -1.84
USP16-203ENST00000399975 LORP23490 312 aaPredicted RBP3.54□□□□□ -1.84
USP16-203ENST00000399975 IGKV2D-30A0A075B6S6 120 aa3.51□□□□□ -1.85
USP16-203ENST00000399975 KRTAP4-8A0A0G2JLE6 195 aa3.49□□□□□ -1.85
USP16-203ENST00000399975 A0A1B0GU69 56 aa3.49□□□□□ -1.85
USP16-203ENST00000399975 UQCR11O14957 56 aa3.48□□□□□ -1.85
USP16-203ENST00000399975 KRTAP19-2Q3LHN2 52 aa3.48□□□□□ -1.85
USP16-203ENST00000399975 LCE2CQ5TA81 110 aa3.48□□□□□ -1.85
USP16-203ENST00000399975 COX6B2Q6YFQ2 88 aa3.47□□□□□ -1.85
USP16-203ENST00000399975 KRTAP4-12Q9BQ66 201 aa3.47□□□□□ -1.85
USP16-203ENST00000399975 MIR22HGQ0VDD5 57 aa3.45□□□□□ -1.86
USP16-203ENST00000399975 RNF213Q63HN8 5207 aa3.45□□□□□ -1.86
USP16-203ENST00000399975 LCE3BQ5TA77 95 aa3.44□□□□□ -1.86
USP16-203ENST00000399975 KRTAP9-9Q9BYP9 154 aa3.44□□□□□ -1.86
USP16-203ENST00000399975 KRTAP9-4Q9BYQ2 154 aa3.44□□□□□ -1.86
USP16-203ENST00000399975 KRTAP3-1Q9BYR8 98 aa3.44□□□□□ -1.86
USP16-203ENST00000399975 LINC01554Q52M75 96 aa3.42□□□□□ -1.86
USP16-203ENST00000399975 UBR4Q5T4S7 5183 aa3.42□□□□□ -1.86
USP16-203ENST00000399975 H1FX-AS1Q4G0G2 97 aa3.42□□□□□ -1.86
USP16-203ENST00000399975 KRTAP4-7Q9BYR0 210 aa3.41□□□□□ -1.86
USP16-203ENST00000399975 FLGP20930 4061 aaPredicted RBP3.37□□□□□ -1.87
USP16-203ENST00000399975 PRAC1Q96KF2 57 aa3.37□□□□□ -1.87
USP16-203ENST00000399975 ADM2Q7Z4H4 148 aa3.36□□□□□ -1.87
USP16-203ENST00000399975 MT1HP80294 61 aa3.35□□□□□ -1.87
USP16-203ENST00000399975 S4R3F8 94 aa3.35□□□□□ -1.87
USP16-203ENST00000399975 MUC2Q02817 5179 aa3.33□□□□□ -1.88
USP16-203ENST00000399975 H0YAA0 97 aa3.32□□□□□ -1.88
USP16-203ENST00000399975 FAT4Q6V0I7 4981 aa3.32□□□□□ -1.88
USP16-203ENST00000399975 CSAG1Q6PB30 78 aa3.31□□□□□ -1.88
USP16-203ENST00000399975 LCE1DQ5T752 114 aa3.3□□□□□ -1.88
USP16-203ENST00000399975 KRTAP25-1Q3LHN0 102 aa3.29□□□□□ -1.88
USP16-203ENST00000399975 A0A1B0GU33 70 aa3.28□□□□□ -1.88
USP16-203ENST00000399975 KRTAP4-9Q9BYQ8 210 aa3.28□□□□□ -1.88
USP16-203ENST00000399975 KRTAP10-6P60371 365 aaPredicted RBP3.25□□□□□ -1.89
USP16-203ENST00000399975 KRTAP19-1Q8IUB9 90 aa3.25□□□□□ -1.89
USP16-203ENST00000399975 M0R2T5 61 aa3.24□□□□□ -1.89
USP16-203ENST00000399975 KRTAP4-2Q9BYR5 136 aa3.24□□□□□ -1.89
USP16-203ENST00000399975 KRTAP9-8Q9BYQ0 159 aa3.22□□□□□ -1.89
USP16-203ENST00000399975 ROMO1P60602 79 aa3.22□□□□□ -1.89
USP16-203ENST00000399975 K7ERS5 55 aa3.21□□□□□ -1.89
USP16-203ENST00000399975 MT2AP02795 61 aa3.19□□□□□ -1.9
USP16-203ENST00000399975 H3BS24 57 aa3.17□□□□□ -1.9
USP16-203ENST00000399975 CRIPTQ9P021 101 aa3.17□□□□□ -1.9
USP16-203ENST00000399975 MT1FP04733 61 aa3.16□□□□□ -1.9
USP16-203ENST00000399975 P0C880 135 aa3.12□□□□□ -1.91
USP16-203ENST00000399975 KRTAP10-10P60014 251 aa3.12□□□□□ -1.91
USP16-203ENST00000399975 KRTAP9-3Q9BYQ3 159 aa3.12□□□□□ -1.91
USP16-203ENST00000399975 SPRR2GQ9BYE4 73 aa3.11□□□□□ -1.91
USP16-203ENST00000399975 KRTAP5-3Q6L8H2 238 aa3.1□□□□□ -1.91
USP16-203ENST00000399975 M0QZ58 72 aa3.1□□□□□ -1.91
USP16-203ENST00000399975 KRTAP13-4Q3LI77 160 aa3.09□□□□□ -1.91
USP16-203ENST00000399975 KRTAP4-11Q9BYQ6 195 aa3.07□□□□□ -1.92
USP16-203ENST00000399975 KRTAP19-8Q3LI54 63 aa3.06□□□□□ -1.92
USP16-203ENST00000399975 KRTAP15-1Q3LI76 137 aa3.05□□□□□ -1.92
USP16-203ENST00000399975 R4GN34 69 aa3.05□□□□□ -1.92
USP16-203ENST00000399975 KRTAP12-1P59990 96 aa3.02□□□□□ -1.93
USP16-203ENST00000399975 KRTAP12-2P59991 146 aa3□□□□□ -1.93
USP16-203ENST00000399975 MT1BP07438 61 aa2.99□□□□□ -1.93
USP16-203ENST00000399975 SPINT4Q6UDR6 99 aa2.97□□□□□ -1.93
USP16-203ENST00000399975 A0A0D9SG42 100 aa2.97□□□□□ -1.93
USP16-203ENST00000399975 PLAC4Q8WY50 150 aa2.93□□□□□ -1.94
USP16-203ENST00000399975 C10orf95Q9H7T3 257 aa2.93□□□□□ -1.94
USP16-203ENST00000399975 KRTAP19-6Q3LI70 58 aa2.91□□□□□ -1.94
USP16-203ENST00000399975 USH2AO75445 5202 aa2.91□□□□□ -1.94
USP16-203ENST00000399975 NDUFAF8A1L188 74 aa2.89□□□□□ -1.95
USP16-203ENST00000399975 KRTAP10-5P60370 271 aa2.88□□□□□ -1.95
USP16-203ENST00000399975 PP632Q6XCG6 107 aa2.87□□□□□ -1.95
USP16-203ENST00000399975 MT1XP80297 61 aa2.86□□□□□ -1.95
USP16-203ENST00000399975 PRO2289Q9P1D8 64 aa2.85□□□□□ -1.95
USP16-203ENST00000399975 SSPOA2VEC9 5147 aa2.85□□□□□ -1.95
USP16-203ENST00000399975 KRTAP23-1A1A580 65 aa2.85□□□□□ -1.95
USP16-203ENST00000399975 CRCT1Q9UGL9 99 aa2.85□□□□□ -1.95
USP16-203ENST00000399975 CAMK2N1Q7Z7J9 78 aa2.83□□□□□ -1.96
USP16-203ENST00000399975 LCE5AQ5TCM9 118 aa2.8□□□□□ -1.96
USP16-203ENST00000399975 SPRR5A0A1B0GTR4 108 aa2.75□□□□□ -1.97
USP16-203ENST00000399975 KRTAP10-12P60413 245 aa2.75□□□□□ -1.97
USP16-203ENST00000399975 FCGBPQ9Y6R7 5405 aaPredicted RBP2.72□□□□□ -1.97
USP16-203ENST00000399975 TNP1P09430 55 aa2.71□□□□□ -1.98
USP16-203ENST00000399975 KRTAP10-7P60409 375 aaPredicted RBP2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms