RNA–Protein interactions for RNA: ENST00000398405.5

TMPRSS3-203, Transcript of transmembrane serine protease 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TMPRSS3, Length 2,754 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMPRSS3-203ENST00000398405 C9orf92A6NGG3 77 aa7.16□□□□□ -1.26
TMPRSS3-203ENST00000398405 KRTAP3-3Q9BYR6 98 aa7.15□□□□□ -1.26
TMPRSS3-203ENST00000398405 S4R3F8 94 aa7.15□□□□□ -1.26
TMPRSS3-203ENST00000398405 FAT2Q9NYQ8 4349 aa7.15□□□□□ -1.27
TMPRSS3-203ENST00000398405 KRTAP10-1P60331 282 aa7.14□□□□□ -1.27
TMPRSS3-203ENST00000398405 VPS13BQ7Z7G8 4022 aa7.12□□□□□ -1.27
TMPRSS3-203ENST00000398405 RYR3Q15413 4870 aa7.12□□□□□ -1.27
TMPRSS3-203ENST00000398405 PKD1P98161 4303 aa7.11□□□□□ -1.27
TMPRSS3-203ENST00000398405 RYR2Q92736 4967 aa7.1□□□□□ -1.27
TMPRSS3-203ENST00000398405 XP32Q5T750 250 aa7.09□□□□□ -1.27
TMPRSS3-203ENST00000398405 KRTAP12-2P59991 146 aa7.07□□□□□ -1.28
TMPRSS3-203ENST00000398405 KRTAP12-1P59990 96 aa7.01□□□□□ -1.29
TMPRSS3-203ENST00000398405 DMBT1Q9UGM3 2413 aaPredicted RBP6.97□□□□□ -1.29
TMPRSS3-203ENST00000398405 PKHD1L1Q86WI1 4243 aa6.94□□□□□ -1.3
TMPRSS3-203ENST00000398405 DYNC1H1Q14204 4646 aaKnown RBP6.93□□□□□ -1.3
TMPRSS3-203ENST00000398405 FAT1Q14517 4588 aa6.9□□□□□ -1.31
TMPRSS3-203ENST00000398405 EPPK1P58107 5090 aaKnown RBP6.89□□□□□ -1.31
TMPRSS3-203ENST00000398405 M0QZ58 72 aa6.86□□□□□ -1.31
TMPRSS3-203ENST00000398405 SMR3BP02814 79 aaPredicted RBP6.86□□□□□ -1.31
TMPRSS3-203ENST00000398405 PLAC4Q8WY50 150 aa6.83□□□□□ -1.32
TMPRSS3-203ENST00000398405 APOBP04114 4563 aaKnown RBP6.83□□□□□ -1.32
TMPRSS3-203ENST00000398405 KRTAP10-8P60410 259 aa6.81□□□□□ -1.32
TMPRSS3-203ENST00000398405 KIAA1109Q2LD37 5005 aa6.79□□□□□ -1.32
TMPRSS3-203ENST00000398405 A0A1B0GVY2 172 aa6.78□□□□□ -1.32
TMPRSS3-203ENST00000398405 KRTAP10-4P60372 401 aaPredicted RBP6.72□□□□□ -1.33
TMPRSS3-203ENST00000398405 CAMK2N1Q7Z7J9 78 aa6.7□□□□□ -1.34
TMPRSS3-203ENST00000398405 LRP1Q07954 4544 aaKnown RBP6.7□□□□□ -1.34
TMPRSS3-203ENST00000398405 HSPG2P98160 4391 aa6.7□□□□□ -1.34
TMPRSS3-203ENST00000398405 MYCBP2O75592 4640 aa6.66□□□□□ -1.34
TMPRSS3-203ENST00000398405 RYR1P21817 5038 aa6.66□□□□□ -1.34
TMPRSS3-203ENST00000398405 KRTAP17-1Q9BYP8 105 aa6.64□□□□□ -1.35
TMPRSS3-203ENST00000398405 FAT3Q8TDW7 4589 aa6.62□□□□□ -1.35
TMPRSS3-203ENST00000398405 TNXBP22105 4242 aa6.62□□□□□ -1.35
TMPRSS3-203ENST00000398405 PP632Q6XCG6 107 aa6.57□□□□□ -1.36
TMPRSS3-203ENST00000398405 Q5VSD8 79 aa6.52□□□□□ -1.37
TMPRSS3-203ENST00000398405 PRO2289Q9P1D8 64 aa6.51□□□□□ -1.37
TMPRSS3-203ENST00000398405 R4GN34 69 aa6.49□□□□□ -1.37
TMPRSS3-203ENST00000398405 ABCA13Q86UQ4 5058 aa6.48□□□□□ -1.37
TMPRSS3-203ENST00000398405 KRTAP4-5Q9BYR2 181 aa6.47□□□□□ -1.37
TMPRSS3-203ENST00000398405 J3QL48 77 aa6.42□□□□□ -1.38
TMPRSS3-203ENST00000398405 BIRC6Q9NR09 4857 aa6.39□□□□□ -1.39
TMPRSS3-203ENST00000398405 HERC2O95714 4834 aa6.39□□□□□ -1.39
TMPRSS3-203ENST00000398405 PCLOQ9Y6V0 5065 aa6.36□□□□□ -1.39
TMPRSS3-203ENST00000398405 SPRR5A0A1B0GTR4 108 aa6.35□□□□□ -1.39
TMPRSS3-203ENST00000398405 LORP23490 312 aaPredicted RBP6.28□□□□□ -1.4
TMPRSS3-203ENST00000398405 KRTAP23-1A1A580 65 aa6.27□□□□□ -1.41
TMPRSS3-203ENST00000398405 LPAP08519 4548 aa6.25□□□□□ -1.41
TMPRSS3-203ENST00000398405 HERC1Q15751 4861 aa6.25□□□□□ -1.41
TMPRSS3-203ENST00000398405 MT1HL1P0DM35 61 aa6.22□□□□□ -1.41
TMPRSS3-203ENST00000398405 INE1O15225 51 aa6.21□□□□□ -1.42
TMPRSS3-203ENST00000398405 LRP2P98164 4655 aa6.18□□□□□ -1.42
TMPRSS3-203ENST00000398405 TNP1P09430 55 aa6.11□□□□□ -1.43
TMPRSS3-203ENST00000398405 MUC2Q02817 5179 aa6.08□□□□□ -1.44
TMPRSS3-203ENST00000398405 RNF213Q63HN8 5207 aa5.95□□□□□ -1.46
TMPRSS3-203ENST00000398405 UBR4Q5T4S7 5183 aa5.94□□□□□ -1.46
TMPRSS3-203ENST00000398405 HMCN2Q8NDA2 5059 aa5.92□□□□□ -1.46
TMPRSS3-203ENST00000398405 MUC17Q685J3 4493 aa5.92□□□□□ -1.46
TMPRSS3-203ENST00000398405 KRTAP19-2Q3LHN2 52 aa5.87□□□□□ -1.47
TMPRSS3-203ENST00000398405 KRTAP4-1Q9BYQ7 146 aa5.82□□□□□ -1.48
TMPRSS3-203ENST00000398405 FLGP20930 4061 aaPredicted RBP5.76□□□□□ -1.49
TMPRSS3-203ENST00000398405 FAT4Q6V0I7 4981 aa5.76□□□□□ -1.49
TMPRSS3-203ENST00000398405 LCE3AQ5TA76 89 aa5.68□□□□□ -1.5
TMPRSS3-203ENST00000398405 KRTAP8-1Q8IUC2 63 aa5.62□□□□□ -1.51
TMPRSS3-203ENST00000398405 SPRR2GQ9BYE4 73 aa5.59□□□□□ -1.52
TMPRSS3-203ENST00000398405 KRTAP19-1Q8IUB9 90 aa5.49□□□□□ -1.53
TMPRSS3-203ENST00000398405 KRTAP10-12P60413 245 aa5.46□□□□□ -1.54
TMPRSS3-203ENST00000398405 KRTAP12-3P60328 96 aa5.41□□□□□ -1.54
TMPRSS3-203ENST00000398405 KRTAP10-10P60014 251 aa5.35□□□□□ -1.55
TMPRSS3-203ENST00000398405 LCE2CQ5TA81 110 aa5.35□□□□□ -1.55
TMPRSS3-203ENST00000398405 M0R2T5 61 aa5.33□□□□□ -1.56
TMPRSS3-203ENST00000398405 KRTAP10-5P60370 271 aa5.28□□□□□ -1.56
TMPRSS3-203ENST00000398405 MT1HP80294 61 aa5.26□□□□□ -1.57
TMPRSS3-203ENST00000398405 KRTAP19-8Q3LI54 63 aa5.25□□□□□ -1.57
TMPRSS3-203ENST00000398405 MT1XP80297 61 aa5.21□□□□□ -1.57
TMPRSS3-203ENST00000398405 LCE3CQ5T5A8 94 aa5.14□□□□□ -1.59
TMPRSS3-203ENST00000398405 FSIP2Q5CZC0 6907 aa5.14□□□□□ -1.59
TMPRSS3-203ENST00000398405 MT1FP04733 61 aa5.13□□□□□ -1.59
TMPRSS3-203ENST00000398405 MT2AP02795 61 aa5.12□□□□□ -1.59
TMPRSS3-203ENST00000398405 MT1BP07438 61 aa5.11□□□□□ -1.59
TMPRSS3-203ENST00000398405 USH2AO75445 5202 aa5.11□□□□□ -1.59
TMPRSS3-203ENST00000398405 KRTAP10-7P60409 375 aaPredicted RBP5.08□□□□□ -1.6
TMPRSS3-203ENST00000398405 KRTAP2-3P0C7H8 128 aa5.08□□□□□ -1.6
TMPRSS3-203ENST00000398405 KRTAP2-4Q9BYR9 128 aa5.08□□□□□ -1.6
TMPRSS3-203ENST00000398405 KRTAP2-1Q9BYU5 128 aa5.08□□□□□ -1.6
TMPRSS3-203ENST00000398405 KRTAP9-8Q9BYQ0 159 aa5.05□□□□□ -1.6
TMPRSS3-203ENST00000398405 LCE2AQ5TA79 106 aaPredicted RBP5.01□□□□□ -1.61
TMPRSS3-203ENST00000398405 KRTAP9-6A8MVA2 160 aa4.98□□□□□ -1.61
TMPRSS3-203ENST00000398405 KRTAP19-5Q3LI72 72 aa4.98□□□□□ -1.61
TMPRSS3-203ENST00000398405 KRTAP9-3Q9BYQ3 159 aa4.85□□□□□ -1.63
TMPRSS3-203ENST00000398405 KRTAP19-4Q3LI73 84 aa4.83□□□□□ -1.64
TMPRSS3-203ENST00000398405 LCE2BO14633 110 aa4.81□□□□□ -1.64
TMPRSS3-203ENST00000398405 SSPOA2VEC9 5147 aa4.76□□□□□ -1.65
TMPRSS3-203ENST00000398405 KMT2DO14686 5537 aa4.74□□□□□ -1.65
TMPRSS3-203ENST00000398405 KRTAP19-7Q3SYF9 63 aa4.65□□□□□ -1.67
TMPRSS3-203ENST00000398405 KRTAP4-7Q9BYR0 210 aa4.65□□□□□ -1.67
TMPRSS3-203ENST00000398405 KRTAP4-8A0A0G2JLE6 195 aa4.61□□□□□ -1.67
TMPRSS3-203ENST00000398405 KRTAP4-8Q9BYQ9 185 aa4.61□□□□□ -1.67
TMPRSS3-203ENST00000398405 MT1LQ93083 61 aa4.56□□□□□ -1.68
TMPRSS3-203ENST00000398405 KRTAP12-4P60329 112 aa4.55□□□□□ -1.68
TMPRSS3-203ENST00000398405 FCGBPQ9Y6R7 5405 aaPredicted RBP4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms